Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2819

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,374,609	+		Echvi_2817	0.78	-0.4
3,374,609	+		Echvi_2817	0.78	-0.3
3,374,613	-		Echvi_2817	0.79	+0.4
3,374,613	-		Echvi_2817	0.79	-0.5
3,374,613	-		Echvi_2817	0.79	+0.7
3,374,613	-		Echvi_2817	0.79	-0.3
3,374,625	+		Echvi_2817	0.79	+0.5
3,374,626	-		Echvi_2817	0.79	+0.1
3,374,655	+		Echvi_2817	0.81	-0.5
3,374,656	-		Echvi_2817	0.81	+0.6
3,374,667	+		Echvi_2817	0.82	-0.2
3,374,754	-		Echvi_2817	0.88	-0.2
3,374,802	+				+1.0
3,374,811	+				-0.8
3,374,840	+				+0.5
3,374,841	-				-0.1
3,374,863	+				+0.0
3,374,863	+				-0.2
3,374,944	+				-0.0
3,374,948	-				-0.4
3,374,992	+		Echvi_2818	0.11	-1.9
3,374,992	+		Echvi_2818	0.11	+0.5
3,374,993	-		Echvi_2818	0.11	+0.7
3,374,994	+		Echvi_2818	0.11	-0.3
3,374,994	+		Echvi_2818	0.11	+0.2
3,374,995	-		Echvi_2818	0.11	+0.8
3,375,324	+		Echvi_2818	0.65	+0.2
3,375,325	-		Echvi_2818	0.65	-1.7
3,375,339	+		Echvi_2818	0.67	+1.1
3,375,339	+		Echvi_2818	0.67	+0.2
3,375,340	-		Echvi_2818	0.67	+1.8
3,375,340	-		Echvi_2818	0.67	-0.9
3,375,340	-		Echvi_2818	0.67	-0.3
3,375,340	-		Echvi_2818	0.67	-0.3
3,375,444	-		Echvi_2818	0.84	-1.2
3,375,491	+				-0.2
3,375,491	+				-0.7
3,375,491	+				-1.2
3,375,492	-				+0.5
3,375,503	+				-0.1
3,375,504	-				+0.2
3,375,524	-				+0.1
3,375,568	-				+1.0
3,375,602	+		Echvi_2819	0.13	+1.2
3,375,609	-		Echvi_2819	0.15	-0.9
3,375,609	-		Echvi_2819	0.15	-0.5
3,375,614	+		Echvi_2819	0.15	-0.4
3,375,649	+		Echvi_2819	0.21	+0.5
3,375,771	-		Echvi_2819	0.42	-0.7
3,375,771	-		Echvi_2819	0.42	+1.6
3,375,771	-		Echvi_2819	0.42	-1.0
3,375,837	+		Echvi_2819	0.53	+0.2
3,375,838	-		Echvi_2819	0.53	+0.2
3,375,949	+		Echvi_2819	0.72	-2.0
3,375,949	+		Echvi_2819	0.72	-0.4
3,375,949	+		Echvi_2819	0.72	-1.0
3,375,949	+		Echvi_2819	0.72	-0.4
3,375,949	+		Echvi_2819	0.72	+0.0
3,375,949	+		Echvi_2819	0.72	-0.5
3,375,949	+		Echvi_2819	0.72	-0.5
3,375,949	+		Echvi_2819	0.72	-0.4
3,375,949	+		Echvi_2819	0.72	+0.2
3,375,949	+		Echvi_2819	0.72	-1.0
3,375,950	-		Echvi_2819	0.72	-0.4
3,375,955	+		Echvi_2819	0.73	+0.2
3,375,956	-		Echvi_2819	0.73	-0.5
3,375,976	+		Echvi_2819	0.76	+0.1
3,375,976	+		Echvi_2819	0.76	-1.1
3,375,977	-		Echvi_2819	0.76	-1.0
3,376,072	+				+0.8
3,376,072	+				-0.3
3,376,073	-				+0.5
3,376,095	+				-0.5
3,376,119	-				+0.6
3,376,119	-				-0.7
3,376,119	-				+0.5
3,376,119	-				+0.5
3,376,119	-				-0.4
3,376,229	-				-1.9
3,376,233	-				-0.4
3,376,236	+				-0.4
3,376,292	+				+0.4
3,376,292	+				+1.6
3,376,322	+				-1.2
3,376,391	-		Echvi_2820	0.15	+0.1
3,376,391	-		Echvi_2820	0.15	-0.0
3,376,391	-		Echvi_2820	0.15	-0.8
3,376,448	+		Echvi_2820	0.29	-2.9
3,376,630	-		Echvi_2820	0.72	-0.8
3,376,650	-		Echvi_2820	0.77	-0.8
3,376,685	-		Echvi_2820	0.86	+2.2
3,376,686	+		Echvi_2820	0.86	+0.4
3,376,688	+		Echvi_2820	0.86	-0.2
3,376,689	-		Echvi_2820	0.87	-1.2
3,376,716	+				+1.1
3,376,717	-				+0.1
3,376,739	+				+0.3
3,376,749	+				+0.9
3,376,749	+				-0.4
3,376,768	+				+0.9
3,376,781	+				+2.4
3,376,869	-		Echvi_2821	0.16	+1.6
3,377,041	+		Echvi_2821	0.35	+0.2
3,377,045	+		Echvi_2821	0.35	+2.8
3,377,045	+		Echvi_2821	0.35	-0.5
3,377,045	+		Echvi_2821	0.35	-0.7
3,377,046	-		Echvi_2821	0.36	-1.1
3,377,046	-		Echvi_2821	0.36	-0.6
3,377,072	+		Echvi_2821	0.38	+3.7
3,377,072	+		Echvi_2821	0.38	+0.1
3,377,072	+		Echvi_2821	0.38	+0.1
3,377,072	+		Echvi_2821	0.38	-0.1
3,377,073	-		Echvi_2821	0.38	+2.1
3,377,073	-		Echvi_2821	0.38	+2.3