Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1064

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
1,224,304	+		Echvi_1063	0.54	-0.9
1,224,305	-		Echvi_1063	0.54	+0.2
1,224,342	-		Echvi_1063	0.58	-0.8
1,224,348	+		Echvi_1063	0.59	-0.6
1,224,349	-		Echvi_1063	0.59	-1.1
1,224,349	-		Echvi_1063	0.59	-0.1
1,224,447	+		Echvi_1063	0.71	+0.1
1,224,492	+		Echvi_1063	0.77	+1.7
1,224,527	-		Echvi_1063	0.81	-0.7
1,224,567	+		Echvi_1063	0.86	+0.8
1,224,568	-		Echvi_1063	0.86	+0.5
1,224,570	+		Echvi_1063	0.86	-0.0
1,224,570	+		Echvi_1063	0.86	+0.1
1,224,570	+		Echvi_1063	0.86	+0.3
1,224,616	+				-0.1
1,224,616	+				-0.4
1,224,617	-				-0.8
1,224,617	-				-0.3
1,224,649	+				-0.5
1,224,650	-				-0.3
1,224,733	+				-0.3
1,224,733	+				-0.4
1,224,734	-				-1.4
1,224,734	-				+1.8
1,224,736	+				+1.1
1,224,736	+				+0.1
1,224,737	-				+0.1
1,224,737	-				-0.7
1,224,737	-				+0.8
1,224,742	-				+0.2
1,224,746	-				-0.7
1,224,746	-				+0.5
1,224,746	-				-2.8
1,224,799	+				+0.8
1,224,799	+				-0.9
1,224,800	-				+0.7
1,224,800	-				-2.5
1,224,800	-				-0.9
1,224,800	-				-0.1
1,224,807	+				+0.2
1,224,807	+				+0.9
1,224,807	+				-0.2
1,224,807	+				-0.8
1,224,808	-				-1.0
1,224,811	+				-0.5
1,224,812	-				-0.3
1,224,812	-				+1.5
1,224,818	+				+0.3
1,224,818	+				-0.0
1,224,819	-				-0.6
1,224,819	-				+0.0
1,224,819	-				-0.0
1,224,819	-				-1.2
1,224,825	+				-0.4
1,224,825	+				-0.2
1,224,840	-				-0.9
1,224,851	+				-0.2
1,224,854	+				+0.2
1,224,854	+				-0.9
1,224,854	+				+0.1
1,224,855	-				+1.0
1,224,877	+				+0.4
1,224,877	+				-0.3
1,224,877	+				+0.7
1,224,877	+				-1.4
1,224,878	-				-1.0
1,224,878	-				-0.2
1,224,884	-				-1.2
1,224,886	+				+0.5
1,224,929	+				-0.2
1,224,929	+				+0.0
1,224,929	+				-1.5
1,224,929	+				+0.5
1,224,929	+				+0.1
1,224,930	-				-0.1
1,224,973	-				-2.0
1,224,988	-				-0.4
1,225,012	-				+0.1
1,225,012	-				-1.3
1,225,040	-				-0.4
1,225,066	+				+0.2
1,225,067	-				-0.2
1,225,067	-				-1.2
1,225,074	+				-1.4
1,225,075	-				-0.1
1,225,075	-				-0.5
1,225,075	-				+0.1
1,225,087	+				+1.6
1,225,143	+				-0.6
1,225,155	+				+0.1
1,225,156	-				-0.7
1,225,156	-				+2.1
1,225,246	-				+1.5
1,225,246	-				-1.1
1,225,248	+				+0.0
1,225,249	-				+1.3
1,225,249	-				-0.3
1,225,249	-				-0.2
1,225,277	+				-0.2
1,225,277	+				+0.0
1,225,277	+				+0.3
1,225,278	-				-1.1
1,225,278	-				-0.4
1,225,278	-				+0.1
1,225,278	-				-0.2
1,225,283	+				-0.4
1,225,283	+				-1.0
1,225,283	+				+0.5
1,225,283	+				-0.5
1,225,284	-				-0.0
1,225,286	-				-0.4
1,225,314	-		Echvi_1064	0.14	+1.7
1,225,314	-		Echvi_1064	0.14	+0.3
1,225,316	-		Echvi_1064	0.15	+0.5
1,225,335	+		Echvi_1064	0.21	-0.1
1,225,391	+		Echvi_1064	0.39	-0.8
1,225,392	-		Echvi_1064	0.39	+0.1
1,225,392	-		Echvi_1064	0.39	+0.3
1,225,395	+		Echvi_1064	0.40	-0.9
1,225,395	+		Echvi_1064	0.40	+2.4
1,225,413	-		Echvi_1064	0.46	+0.5
1,225,424	+		Echvi_1064	0.49	-1.1
1,225,424	+		Echvi_1064	0.49	+0.5
1,225,424	+		Echvi_1064	0.49	+0.2
1,225,434	+		Echvi_1064	0.52	-1.5
1,225,521	+		Echvi_1064	0.80	-0.1
1,225,521	+		Echvi_1064	0.80	+0.3
1,225,521	+		Echvi_1064	0.80	-0.5
1,225,521	+		Echvi_1064	0.80	-0.4
1,225,522	-		Echvi_1064	0.80	-0.8
1,225,565	+				-0.5
1,225,565	+				-0.8
1,225,566	-				+0.5
1,225,571	-				+1.5
1,225,571	-				-0.9
1,225,667	+				-0.3
1,225,696	-				-1.4
1,225,697	+				+0.9
1,225,698	-				-1.1
1,225,699	+				-0.5
1,225,699	+				-0.3
1,225,699	+				-0.1
1,225,699	+				-0.1
1,225,699	+				+0.5
1,225,700	-				-1.2
1,225,700	-				+0.3
1,225,700	-				+0.0
1,225,700	-				+1.6
1,225,703	+				-1.1
1,225,703	+				-0.7
1,225,703	+				+0.4
1,225,703	+				+0.1
1,225,704	-				-1.0
1,225,715	-				-0.3
1,225,717	+				-1.5
1,225,717	+				-0.5
1,225,792	+				+0.3
1,225,802	-				+0.9
1,225,821	+				-0.5
1,225,821	+				-0.1
1,225,822	-				-0.5
1,225,822	-				+0.1
1,225,836	+				+0.5
1,225,837	-				-0.0
1,225,841	+				+0.5
1,225,842	-				+0.1
1,225,843	+				-0.7
1,225,846	+				-0.2
1,225,847	-				-0.4
1,225,847	-				+1.5
1,225,849	-				+0.2
1,225,873	+				-0.2
1,225,873	+				+0.1
1,225,873	+				+0.5
1,225,873	+				-1.8
1,225,873	+				-0.7
1,225,874	-				+0.4
1,225,882	+				+0.3
1,225,882	+				+0.4
1,225,882	+				-0.9
1,225,882	+				-1.9
1,225,883	-				+0.4
1,225,883	-				-0.0
1,225,883	-				+0.4
1,225,905	+				+0.3
1,225,906	-				+0.4
1,225,909	+				-0.1
1,225,910	-				-0.5
1,225,910	-				+2.1
1,225,912	+				+0.4
1,225,913	-				-0.9
1,225,913	-				-0.7
1,225,934	+				-0.8
1,225,934	+				+0.1
1,225,934	+				+1.1
1,225,935	-				+0.6
1,225,935	-				-0.4
1,225,935	-				+0.3
1,225,975	+				+0.6
1,225,975	+				-0.4
1,225,975	+				+0.7
1,225,976	-				-0.5
1,225,999	+		Echvi_1065	0.15	-1.6
1,226,063	-		Echvi_1065	0.29	+0.1
1,226,069	+		Echvi_1065	0.30	-0.6
1,226,069	+		Echvi_1065	0.30	-0.4
1,226,070	-		Echvi_1065	0.31	+0.5
1,226,073	+		Echvi_1065	0.31	-0.4
1,226,074	-		Echvi_1065	0.32	-0.8
1,226,074	-		Echvi_1065	0.32	+0.5
1,226,095	-		Echvi_1065	0.36	-0.2
1,226,095	-		Echvi_1065	0.36	-1.3
1,226,188	+		Echvi_1065	0.57	-0.4
1,226,331	+		Echvi_1065	0.90	+1.0
1,226,331	+		Echvi_1065	0.90	+0.3
1,226,331	+		Echvi_1065	0.90	-1.2
1,226,332	-				-2.5
1,226,332	-				+0.2
1,226,333	+				-1.1
1,226,382	+				-0.3
1,226,383	-				-0.3
1,226,426	+				+1.2
1,226,426	+				+1.0
1,226,426	+				+0.9
1,226,426	+				+0.1
1,226,427	-				-1.1
1,226,443	+				+0.4
1,226,444	-				+0.5
1,226,514	+		Echvi_1066	0.19	-0.2
1,226,514	+		Echvi_1066	0.19	+0.8
1,226,514	+		Echvi_1066	0.19	+1.1
1,226,514	+		Echvi_1066	0.19	-0.7
1,226,515	-		Echvi_1066	0.19	-0.2
1,226,553	+		Echvi_1066	0.26	+2.1
1,226,553	+		Echvi_1066	0.26	-1.2
1,226,553	+		Echvi_1066	0.26	-1.2
1,226,553	+		Echvi_1066	0.26	-0.4
1,226,554	-		Echvi_1066	0.26	-0.2
1,226,570	-		Echvi_1066	0.28	+1.0
1,226,570	-		Echvi_1066	0.28	+0.8