Strain Fitness in Escherichia coli BW25113 around b4479

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
3,871,586	-				-0.6
3,871,592	-				+0.4
3,871,645	+				-1.6
3,871,646	+				-0.6
3,871,664	-				+0.8
3,871,738	+	dgoK	b3693	0.14	-0.6
3,871,761	-	dgoK	b3693	0.16	-0.2
3,871,762	+	dgoK	b3693	0.16	+0.4
3,871,763	-	dgoK	b3693	0.16	+0.1
3,871,763	-	dgoK	b3693	0.16	+0.8
3,871,774	-	dgoK	b3693	0.18	-0.6
3,871,774	-	dgoK	b3693	0.18	+0.1
3,871,784	-	dgoK	b3693	0.19	+0.2
3,871,784	-	dgoK	b3693	0.19	-1.1
3,871,799	-	dgoK	b3693	0.20	-0.8
3,871,825	-	dgoK	b3693	0.23	+1.1
3,871,835	+	dgoK	b3693	0.25	+0.6
3,871,835	+	dgoK	b3693	0.25	-0.6
3,871,848	-	dgoK	b3693	0.26	-2.3
3,871,848	-	dgoK	b3693	0.26	-0.4
3,871,917	-	dgoK	b3693	0.34	-0.0
3,871,940	-	dgoK	b3693	0.37	-0.3
3,872,090	+	dgoK	b3693	0.54	+1.4
3,872,106	-	dgoK	b3693	0.55	+1.1
3,872,162	-	dgoK	b3693	0.62	+0.1
3,872,162	-	dgoK	b3693	0.62	+0.9
3,872,175	-	dgoK	b3693	0.63	+0.4
3,872,175	-	dgoK	b3693	0.63	+0.2
3,872,219	+	dgoK	b3693	0.68	-0.3
3,872,342	-	dgoK	b3693	0.82	+0.7
3,872,343	+	dgoK	b3693	0.82	-0.4
3,872,353	+	dgoK	b3693	0.84	+2.7
3,872,353	+	dgoK	b3693	0.84	-0.4
3,872,362	-	dgoK	b3693	0.85	+0.2
3,872,422	-				-0.2
3,872,437	+				+0.0
3,872,464	+				+1.4
3,872,496	-				-1.9
3,872,496	-				-0.8
3,872,520	-				+0.4
3,872,520	-				-1.1
3,872,603	-	dgoR	b4479	0.16	+0.2
3,872,621	-	dgoR	b4479	0.18	-0.8
3,872,639	+	dgoR	b4479	0.21	+0.3
3,872,639	+	dgoR	b4479	0.21	-1.0
3,872,717	+	dgoR	b4479	0.32	-0.0
3,872,727	-	dgoR	b4479	0.34	-1.1
3,872,770	+	dgoR	b4479	0.40	-0.2
3,872,812	-	dgoR	b4479	0.46	-0.3
3,872,841	+	dgoR	b4479	0.50	+0.1
3,872,948	+	dgoR	b4479	0.66	-1.5
3,872,948	+	dgoR	b4479	0.66	+0.6
3,872,968	+	dgoR	b4479	0.69	-1.8
3,872,976	+	dgoR	b4479	0.70	-0.4
3,872,986	-	dgoR	b4479	0.71	+1.0
3,872,986	-	dgoR	b4479	0.71	+1.4
3,873,066	-	dgoR	b4479	0.83	-0.2
3,873,179	+				+0.0
3,873,190	+				+0.1
3,873,198	-				+0.1
3,873,209	-				+0.6
3,873,209	-				-1.2
3,873,249	+				+1.4
3,873,285	+				-1.5
3,873,285	+				-0.9
3,873,285	-				+0.2
3,873,393	-				-1.7
3,873,400	+				-0.2
3,873,408	-				+0.8
3,873,408	-				+2.1
3,873,433	+				-0.4
3,873,535	+	yidX	b3696	0.11	-1.8
3,873,537	+	yidX	b3696	0.12	-1.0
3,873,537	+	yidX	b3696	0.12	+0.6
3,873,560	+	yidX	b3696	0.15	+1.0
3,873,570	+	yidX	b3696	0.17	+0.2
3,873,596	+	yidX	b3696	0.21	+0.1
3,873,596	+	yidX	b3696	0.21	+0.1
3,873,606	-	yidX	b3696	0.22	-1.5
3,873,668	+	yidX	b3696	0.32	-0.1
3,873,731	+	yidX	b3696	0.41	+0.8
3,873,768	-	yidX	b3696	0.47	+1.3
3,873,768	-	yidX	b3696	0.47	+0.7
3,873,812	+	yidX	b3696	0.53	+1.8
3,873,812	+	yidX	b3696	0.53	-1.6
3,873,876	-	yidX	b3696	0.63	+0.2
3,873,878	+	yidX	b3696	0.63	-0.9
3,873,883	+	yidX	b3696	0.64	+0.1
3,873,886	-	yidX	b3696	0.65	+0.1
3,873,888	+	yidX	b3696	0.65	-1.4
3,873,888	+	yidX	b3696	0.65	+0.4
3,873,895	-	yidX	b3696	0.66	+2.6
3,873,896	-	yidX	b3696	0.66	+0.4
3,873,896	-	yidX	b3696	0.66	-0.6
3,873,903	-	yidX	b3696	0.67	-0.6
3,873,903	-	yidX	b3696	0.67	-2.3
3,873,914	+	yidX	b3696	0.69	+0.1
3,873,948	+	yidX	b3696	0.74	-0.3
3,874,000	+	yidX	b3696	0.82	-0.4
3,874,000	+	yidX	b3696	0.82	+0.2
3,874,045	-	yidX	b3696	0.89	+1.2
3,874,045	-	yidX	b3696	0.89	-1.2
3,874,053	+				+0.4
3,874,053	+				+1.0
3,874,055	+				-0.7
3,874,061	+				+1.4
3,874,061	+				+0.7
3,874,066	+				-1.1
3,874,076	-				+0.4
3,874,079	-				+0.9
3,874,096	+				-0.1
3,874,128	+				+1.1
3,874,128	+				-1.2
3,874,152	-				-0.2
3,874,161	+				+0.4
3,874,169	+				-0.8