Strain Fitness in Escherichia coli BW25113 around b3081

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
3,228,714	+	ygjK	b3080	0.77	-0.6
3,228,714	+	ygjK	b3080	0.77	+0.6
3,228,726	+	ygjK	b3080	0.77	-0.4
3,228,771	+	ygjK	b3080	0.79	-0.1
3,228,771	+	ygjK	b3080	0.79	+1.4
3,228,784	-	ygjK	b3080	0.80	-0.1
3,228,797	-	ygjK	b3080	0.80	-1.0
3,228,899	+	ygjK	b3080	0.85	-0.5
3,228,918	+	ygjK	b3080	0.85	-0.5
3,228,918	+	ygjK	b3080	0.85	-0.4
3,228,939	+	ygjK	b3080	0.86	+0.4
3,229,131	-				+0.4
3,229,170	-				-0.1
3,229,286	+				+1.1
3,229,356	+				+0.7
3,229,391	+				+0.5
3,229,491	+				+1.7
3,229,491	+				+0.7
3,229,560	+				+0.7
3,229,560	+				-0.2
3,229,595	+				+0.5
3,229,598	-				-0.2
3,229,598	-				+0.2
3,229,611	-				+0.4
3,229,757	+				+0.2
3,229,820	-				+0.0
3,229,906	-	fadH	b3081	0.11	-0.6
3,229,927	+	fadH	b3081	0.12	+0.3
3,230,012	+	fadH	b3081	0.16	+0.5
3,230,012	+	fadH	b3081	0.16	-1.3
3,230,026	-	fadH	b3081	0.17	+0.2
3,230,139	-	fadH	b3081	0.22	-0.4
3,230,144	+	fadH	b3081	0.23	-0.8
3,230,159	+	fadH	b3081	0.23	+0.5
3,230,159	+	fadH	b3081	0.23	-0.5
3,230,167	-	fadH	b3081	0.24	-0.0
3,230,174	+	fadH	b3081	0.24	-0.1
3,230,213	+	fadH	b3081	0.26	+1.5
3,230,213	+	fadH	b3081	0.26	-1.1
3,230,216	+	fadH	b3081	0.26	-0.1
3,230,290	+	fadH	b3081	0.30	+0.5
3,230,323	+	fadH	b3081	0.32	+0.1
3,230,442	+	fadH	b3081	0.37	-0.8
3,230,466	+	fadH	b3081	0.39	-0.3
3,230,466	+	fadH	b3081	0.39	-0.0
3,230,709	-	fadH	b3081	0.51	+1.0
3,230,709	-	fadH	b3081	0.51	-0.6
3,230,714	-	fadH	b3081	0.51	+0.2
3,230,714	-	fadH	b3081	0.51	-1.2
3,230,714	-	fadH	b3081	0.51	+0.7
3,230,922	+	fadH	b3081	0.61	-1.0
3,230,928	-	fadH	b3081	0.61	-0.2
3,231,019	+	fadH	b3081	0.66	-1.1
3,231,139	+	fadH	b3081	0.72	-1.0
3,231,163	-	fadH	b3081	0.73	+0.5
3,231,199	-	fadH	b3081	0.75	-0.1
3,231,267	+	fadH	b3081	0.78	-0.3
3,231,267	+	fadH	b3081	0.78	-0.2
3,231,356	+	fadH	b3081	0.83	-0.6
3,231,399	-	fadH	b3081	0.85	-0.7
3,231,427	-	fadH	b3081	0.86	+0.0
3,231,428	+	fadH	b3081	0.86	-1.1
3,231,428	+	fadH	b3081	0.86	-1.0
3,231,428	+	fadH	b3081	0.86	-0.5
3,231,428	+	fadH	b3081	0.86	+1.7
3,231,504	-				-0.7
3,231,530	+				+0.9
3,231,530	+				+0.2
3,231,547	+				-0.9
3,231,552	+				+0.0
3,231,643	+				+0.3
3,231,673	+				+0.5
3,231,812	-	ygjM	b3082	0.15	-1.1
3,231,855	-	ygjM	b3082	0.25	+0.0
3,231,856	-	ygjM	b3082	0.25	+0.0
3,231,892	-	ygjM	b3082	0.34	-1.3
3,231,892	-	ygjM	b3082	0.34	-1.0
3,232,179	+				+0.2
3,232,179	+				-0.3
3,232,181	+				+1.0
3,232,186	+				-0.5
3,232,189	-				-0.7
3,232,233	+	ygjN	b3083	0.22	+0.2
3,232,267	+	ygjN	b3083	0.33	+0.0
3,232,272	-	ygjN	b3083	0.35	+1.0
3,232,302	+	ygjN	b3083	0.44	+0.3
3,232,394	+	ygjN	b3083	0.73	+0.2
3,232,416	+	ygjN	b3083	0.80	+0.8
3,232,465	-				-1.0
3,232,465	-				+1.0
3,232,465	-				-0.5
3,232,471	+				-0.5
3,232,603	+				-0.3
3,232,603	+				+2.0
3,232,704	-				+0.5
3,232,704	-				+0.2