Strain Fitness in Escherichia coli BW25113 around b2441
Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,554,436 | - | -0.7 | |||
2,554,533 | - | eutC | b2440 | 0.11 | -0.3 |
2,554,718 | + | eutC | b2440 | 0.32 | -1.5 |
2,554,720 | + | eutC | b2440 | 0.32 | +1.1 |
2,554,723 | - | eutC | b2440 | 0.33 | +0.5 |
2,554,723 | - | eutC | b2440 | 0.33 | +0.3 |
2,554,757 | - | eutC | b2440 | 0.37 | -1.2 |
2,554,805 | + | eutC | b2440 | 0.42 | -0.2 |
2,554,883 | + | eutC | b2440 | 0.51 | -0.2 |
2,554,901 | - | eutC | b2440 | 0.53 | +2.6 |
2,554,901 | - | eutC | b2440 | 0.53 | +0.1 |
2,554,970 | + | eutC | b2440 | 0.61 | +0.1 |
2,555,001 | + | eutC | b2440 | 0.64 | -0.1 |
2,555,038 | - | eutC | b2440 | 0.68 | -2.2 |
2,555,038 | - | eutC | b2440 | 0.68 | +0.4 |
2,555,097 | + | eutC | b2440 | 0.75 | -0.9 |
2,555,097 | + | eutC | b2440 | 0.75 | +1.3 |
2,555,176 | + | eutC | b2440 | 0.84 | +0.2 |
2,555,270 | + | +0.4 | |||
2,555,270 | + | +0.4 | |||
2,555,551 | - | eutB | b2441 | 0.15 | +0.1 |
2,555,551 | - | eutB | b2441 | 0.15 | +0.2 |
2,555,630 | - | eutB | b2441 | 0.21 | -0.3 |
2,555,700 | - | eutB | b2441 | 0.26 | +1.8 |
2,555,700 | - | eutB | b2441 | 0.26 | +0.4 |
2,555,728 | + | eutB | b2441 | 0.28 | -0.4 |
2,555,795 | - | eutB | b2441 | 0.33 | +0.1 |
2,556,024 | + | eutB | b2441 | 0.50 | -0.0 |
2,556,024 | + | eutB | b2441 | 0.50 | -1.5 |
2,556,026 | + | eutB | b2441 | 0.50 | -0.5 |
2,556,149 | + | eutB | b2441 | 0.59 | +1.3 |
2,556,151 | - | eutB | b2441 | 0.60 | -0.1 |
2,556,157 | - | eutB | b2441 | 0.60 | +0.0 |
2,556,341 | + | eutB | b2441 | 0.73 | -0.2 |
2,556,409 | - | eutB | b2441 | 0.78 | -0.1 |
2,556,500 | - | eutB | b2441 | 0.85 | +0.2 |
2,556,535 | - | eutB | b2441 | 0.88 | -0.6 |
2,556,575 | + | -0.1 | |||
2,556,663 | - | -0.2 | |||
2,556,782 | + | -1.7 | |||
2,556,782 | + | +0.9 | |||
2,556,936 | + | +0.2 | |||
2,557,047 | + | intZ | b2442 | 0.14 | +0.1 |
2,557,094 | + | intZ | b2442 | 0.18 | +0.8 |
2,557,144 | - | intZ | b2442 | 0.22 | +1.4 |
2,557,406 | - | intZ | b2442 | 0.44 | +0.6 |
2,557,475 | - | intZ | b2442 | 0.49 | -1.5 |
Or see this region's nucleotide sequence