Strain Fitness in Escherichia coli BW25113 around b1756
Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.0008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,835,896 | + | ynjC | b1755 | 0.43 | +0.1 |
| 1,835,896 | + | ynjC | b1755 | 0.43 | -0.4 |
| 1,835,982 | - | ynjC | b1755 | 0.49 | -0.2 |
| 1,835,982 | - | ynjC | b1755 | 0.49 | +1.1 |
| 1,836,212 | - | ynjC | b1755 | 0.64 | +0.7 |
| 1,836,387 | + | ynjC | b1755 | 0.75 | +1.6 |
| 1,836,584 | - | ynjC | b1755 | 0.88 | -0.4 |
| 1,836,773 | - | -0.8 | |||
| 1,836,840 | - | ynjD | b1756 | 0.11 | -0.6 |
| 1,837,048 | - | ynjD | b1756 | 0.42 | -0.6 |
| 1,837,083 | + | ynjD | b1756 | 0.48 | -1.1 |
| 1,837,152 | + | ynjD | b1756 | 0.58 | -0.9 |
| 1,837,203 | - | ynjD | b1756 | 0.66 | +1.1 |
| 1,837,203 | - | ynjD | b1756 | 0.66 | -0.9 |
| 1,837,248 | + | ynjD | b1756 | 0.73 | -0.4 |
| 1,837,272 | - | ynjD | b1756 | 0.77 | +0.6 |
| 1,837,793 | + | b1757 | b1757 | 0.23 | -0.4 |
| 1,837,793 | + | b1757 | b1757 | 0.23 | +1.6 |
| 1,838,008 | - | b1757 | b1757 | 0.40 | -0.2 |
| 1,838,022 | + | b1757 | b1757 | 0.41 | -0.7 |
| 1,838,065 | - | b1757 | b1757 | 0.44 | +0.3 |
| 1,838,179 | + | b1757 | b1757 | 0.53 | +0.6 |
| 1,838,194 | - | b1757 | b1757 | 0.54 | +0.6 |
Or see this region's nucleotide sequence