Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4448

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
5,320,971	+		Echvi_4446	0.84	+0.9
5,320,984	+		Echvi_4446	0.84	-1.3
5,320,985	-		Echvi_4446	0.84	-0.3
5,321,015	+		Echvi_4446	0.86	-1.2
5,321,015	+		Echvi_4446	0.86	+0.3
5,321,019	+		Echvi_4446	0.86	-2.1
5,321,029	+		Echvi_4446	0.86	-2.0
5,321,029	+		Echvi_4446	0.86	+0.4
5,321,032	+		Echvi_4446	0.87	-0.2
5,321,034	+		Echvi_4446	0.87	-0.6
5,321,035	-		Echvi_4446	0.87	-1.9
5,321,095	+		Echvi_4446	0.90	-2.5
5,321,096	-		Echvi_4446	0.90	+0.4
5,321,096	-		Echvi_4446	0.90	+0.4
5,321,124	+				+0.5
5,321,124	+				+1.2
5,321,130	+				-1.1
5,321,130	+				-0.1
5,321,145	+				+0.2
5,321,151	+				-0.5
5,321,152	-				-0.0
5,321,152	-				-0.3
5,321,152	-				+2.0
5,321,186	-				+1.2
5,321,251	-				+0.3
5,321,261	-				-0.1
5,321,263	+				+1.2
5,321,269	-				-2.0
5,321,279	-				-0.7
5,321,284	+				+0.1
5,321,364	+				-1.3
5,321,405	+				+1.0
5,321,469	-		Echvi_4447	0.15	-1.1
5,321,502	-		Echvi_4447	0.23	+0.1
5,321,504	+		Echvi_4447	0.24	+0.2
5,321,517	-		Echvi_4447	0.27	+0.1
5,321,519	+		Echvi_4447	0.27	-1.3
5,321,520	-		Echvi_4447	0.28	-0.3
5,321,522	+		Echvi_4447	0.28	-0.5
5,321,529	+		Echvi_4447	0.30	-0.8
5,321,529	+		Echvi_4447	0.30	-0.6
5,321,562	+		Echvi_4447	0.38	-1.4
5,321,562	+		Echvi_4447	0.38	-0.9
5,321,562	+		Echvi_4447	0.38	+1.1
5,321,563	-		Echvi_4447	0.38	+0.1
5,321,648	+		Echvi_4447	0.59	-0.0
5,321,665	+		Echvi_4447	0.64	-1.2
5,321,666	-		Echvi_4447	0.64	-0.3
5,321,674	+		Echvi_4447	0.66	+0.2
5,321,674	+		Echvi_4447	0.66	-0.3
5,321,675	-		Echvi_4447	0.66	-0.3
5,321,731	-		Echvi_4447	0.80	-2.1
5,321,760	+		Echvi_4447	0.87	-0.7
5,321,763	-		Echvi_4447	0.88	-0.3
5,321,827	+				-0.8
5,321,828	-				-0.5
5,321,850	+				-0.2
5,321,851	-				-1.7
5,321,928	+				+0.1
5,321,932	+				+0.1
5,321,941	+				-1.0
5,321,942	-				+1.3
5,321,986	+		Echvi_4448	0.20	-1.1
5,321,986	+		Echvi_4448	0.20	+1.0
5,322,007	+		Echvi_4448	0.30	+0.6
5,322,007	+		Echvi_4448	0.30	+1.3
5,322,008	-		Echvi_4448	0.30	-0.7
5,322,033	+		Echvi_4448	0.43	+1.8
5,322,034	-		Echvi_4448	0.43	+0.8
5,322,037	-		Echvi_4448	0.44	-0.2
5,322,055	+		Echvi_4448	0.53	+0.5
5,322,056	-		Echvi_4448	0.54	+0.0
5,322,056	-		Echvi_4448	0.54	-0.7
5,322,056	-		Echvi_4448	0.54	-1.1
5,322,060	+		Echvi_4448	0.56	+0.6
5,322,060	+		Echvi_4448	0.56	+1.0
5,322,060	+		Echvi_4448	0.56	+1.1
5,322,061	-		Echvi_4448	0.56	-0.2
5,322,066	-		Echvi_4448	0.58	-1.5
5,322,066	-		Echvi_4448	0.58	+1.7
5,322,068	+		Echvi_4448	0.59	+0.2
5,322,069	-		Echvi_4448	0.60	+0.1
5,322,111	-		Echvi_4448	0.80	+0.7
5,322,111	-		Echvi_4448	0.80	+0.4
5,322,111	-		Echvi_4448	0.80	+0.7
5,322,118	-		Echvi_4448	0.84	-0.4
5,322,165	+				+1.1
5,322,204	-				+0.2
5,322,204	-				-0.6
5,322,205	+				+0.7
5,322,206	-				+0.1
5,322,208	+				+0.3
5,322,209	-				-1.2
5,322,209	-				+0.2
5,322,209	-				-0.9
5,322,227	-				-0.0
5,322,237	+				+0.4
5,322,260	+				+0.9
5,322,263	+				+1.3
5,322,273	-				+0.5
5,322,307	+				+0.8
5,322,308	-				+0.5
5,322,335	+				-0.2
5,322,339	+				+0.9
5,322,339	+				+0.4
5,322,350	-				+1.6
5,322,431	-				-0.4
5,322,431	-				+0.3
5,322,433	-				+0.2
5,322,433	-				+0.4
5,322,460	+				+0.4
5,322,466	+				+0.1
5,322,466	+				+1.7
5,322,473	+				-0.3
5,322,485	+				-0.3
5,322,485	+				-2.4
5,322,486	-				-0.4
5,322,486	-				-0.6
5,322,486	-				-0.3
5,322,486	-				-1.1
5,322,486	-				-1.0
5,322,489	-				-0.0
5,322,493	-				-0.1
5,322,500	-				-1.0
5,322,502	+				+0.1
5,322,506	+				+0.2
5,322,507	-				-0.6
5,322,507	-				-0.0
5,322,507	-				-1.2
5,322,512	-				-0.4
5,322,580	-				+0.0
5,322,682	+				+0.6
5,322,685	+				+1.0
5,322,689	+				+0.5
5,322,689	+				+1.3
5,322,689	+				+1.3
5,322,689	+				+2.0
5,322,689	+				-1.0
5,322,689	+				-0.2
5,322,689	+				+0.8
5,322,690	-				-2.2
5,322,737	+				-0.7
5,322,737	+				-0.4
5,322,740	+				+1.0
5,322,741	-				-2.6
5,322,741	-				-0.5
5,322,744	+				+0.5
5,322,779	-				-0.6
5,322,779	-				+0.4
5,322,782	+				+0.5
5,322,782	+				+0.2
5,322,782	+				+1.3
5,322,783	-				-1.8
5,322,783	-				-2.2
5,322,783	-				+0.2
5,322,783	-				+0.0
5,322,804	-				+0.6
5,322,804	-				-1.5
5,322,804	-				+0.9
5,322,927	+		Echvi_4449	0.13	+1.1
5,322,951	-		Echvi_4449	0.15	-0.0
5,322,951	-		Echvi_4449	0.15	+0.3
5,323,042	-		Echvi_4449	0.22	+1.6
5,323,085	+		Echvi_4449	0.25	-1.6
5,323,090	+		Echvi_4449	0.25	+0.7
5,323,139	+		Echvi_4449	0.29	+1.6