Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4192

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
5,005,466	+				+0.8
5,005,467	-				-1.3
5,005,467	-				+1.0
5,005,544	+		Echvi_4189	0.23	+0.3
5,005,571	-		Echvi_4189	0.31	-1.1
5,005,604	+		Echvi_4189	0.40	+0.2
5,005,622	+		Echvi_4189	0.44	+0.9
5,005,647	-		Echvi_4189	0.51	+0.0
5,005,661	+		Echvi_4189	0.55	-0.2
5,005,662	-		Echvi_4189	0.55	+0.9
5,005,678	-		Echvi_4189	0.59	+0.9
5,005,715	-		Echvi_4189	0.69	+0.1
5,005,715	-		Echvi_4189	0.69	+0.4
5,005,720	-		Echvi_4189	0.71	+1.1
5,005,720	-		Echvi_4189	0.71	-0.5
5,005,806	-				-0.3
5,005,806	-				-0.6
5,005,824	+				+0.4
5,005,824	+				-0.7
5,005,824	+				+0.5
5,005,825	-				-1.3
5,005,825	-				+0.0
5,005,828	+				-0.5
5,005,828	+				-0.2
5,005,828	+				+0.1
5,005,829	-				-0.2
5,005,829	-				-1.8
5,005,829	-				-0.1
5,005,829	-				+0.9
5,005,832	+				-0.3
5,005,832	+				+0.4
5,005,832	+				-0.2
5,005,832	+				-0.4
5,005,832	+				-1.1
5,005,832	+				-1.1
5,005,833	-				+0.4
5,005,852	+		Echvi_4190	0.14	+0.1
5,005,870	+		Echvi_4190	0.26	-1.3
5,005,870	+		Echvi_4190	0.26	+0.4
5,005,873	+		Echvi_4190	0.28	-0.9
5,005,874	-		Echvi_4190	0.29	-0.1
5,005,890	+		Echvi_4190	0.39	+1.3
5,005,890	+		Echvi_4190	0.39	-0.7
5,005,890	+		Echvi_4190	0.39	+0.5
5,005,891	-		Echvi_4190	0.40	-0.7
5,005,893	-		Echvi_4190	0.41	+0.1
5,005,912	+		Echvi_4190	0.54	-1.4
5,005,912	+		Echvi_4190	0.54	-0.0
5,005,913	-		Echvi_4190	0.55	-1.3
5,005,913	-		Echvi_4190	0.55	+0.3
5,005,932	+		Echvi_4190	0.67	+0.9
5,005,932	+		Echvi_4190	0.67	+0.7
5,005,933	-		Echvi_4190	0.68	-0.2
5,005,933	-		Echvi_4190	0.68	-0.6
5,005,942	-		Echvi_4190	0.74	+0.3
5,005,990	-				-0.3
5,006,015	-				-0.0
5,006,017	+				-0.2
5,006,018	-				+0.3
5,006,118	-		Echvi_4191	0.27	+0.9
5,006,170	+		Echvi_4191	0.41	-0.2
5,006,171	-		Echvi_4191	0.41	+0.3
5,006,173	+		Echvi_4191	0.42	-0.4
5,006,247	+		Echvi_4191	0.62	+0.3
5,006,271	-		Echvi_4191	0.68	-1.3
5,006,283	+		Echvi_4191	0.71	-2.0
5,006,284	-		Echvi_4191	0.71	+0.3
5,006,284	-		Echvi_4191	0.71	+0.4
5,006,286	+		Echvi_4191	0.72	-0.0
5,006,287	-		Echvi_4191	0.72	-1.1
5,006,287	-		Echvi_4191	0.72	-0.3
5,006,287	-		Echvi_4191	0.72	+0.8
5,006,287	-		Echvi_4191	0.72	+0.2
5,006,355	-				-0.4
5,006,359	+				+0.9
5,006,359	+				-1.2
5,006,360	-				-0.6
5,006,360	-				-0.2
5,006,361	+				-0.1
5,006,361	+				+0.6
5,006,362	-				+1.1
5,006,362	-				-1.0
5,006,362	-				-0.3
5,006,448	-				-1.2
5,006,457	+				-0.2
5,006,457	+				-0.3
5,006,458	-				-0.5
5,006,458	-				-0.4
5,006,521	+				-0.8
5,006,521	+				-0.8
5,006,522	-				-1.5
5,006,522	-				-0.5
5,006,594	+				+1.2
5,006,594	+				-0.5
5,006,595	-				-1.7
5,006,613	-		Echvi_4192	0.11	+0.5
5,006,623	-		Echvi_4192	0.11	+0.1
5,006,623	-		Echvi_4192	0.11	-0.9
5,006,657	-		Echvi_4192	0.13	-0.6
5,006,723	+		Echvi_4192	0.18	-2.3
5,006,749	-		Echvi_4192	0.20	+0.7
5,006,757	-		Echvi_4192	0.20	+0.6
5,006,757	-		Echvi_4192	0.20	-0.1
5,006,757	-		Echvi_4192	0.20	+2.9
5,006,757	-		Echvi_4192	0.20	+0.0
5,006,757	-		Echvi_4192	0.20	-0.7
5,006,761	+		Echvi_4192	0.20	-0.0
5,006,762	-		Echvi_4192	0.20	-0.9
5,006,762	-		Echvi_4192	0.20	+1.2
5,006,762	-		Echvi_4192	0.20	-0.1
5,006,793	-		Echvi_4192	0.22	-0.8
5,006,799	-		Echvi_4192	0.23	-0.6
5,006,799	-		Echvi_4192	0.23	-0.0
5,006,836	+		Echvi_4192	0.25	-0.6
5,006,918	+		Echvi_4192	0.31	+0.6
5,006,920	+		Echvi_4192	0.31	+0.5
5,006,920	+		Echvi_4192	0.31	-0.3
5,006,921	-		Echvi_4192	0.31	-1.1
5,006,943	+		Echvi_4192	0.32	+0.2
5,006,945	+		Echvi_4192	0.32	+0.4
5,006,945	+		Echvi_4192	0.32	+1.0
5,006,945	+		Echvi_4192	0.32	-1.0
5,006,945	+		Echvi_4192	0.32	+1.4
5,006,946	-		Echvi_4192	0.32	-1.0
5,006,971	+		Echvi_4192	0.34	-0.3
5,007,041	+		Echvi_4192	0.39	+0.7
5,007,053	+		Echvi_4192	0.40	-0.5
5,007,060	+		Echvi_4192	0.40	+0.2
5,007,060	+		Echvi_4192	0.40	-0.3
5,007,061	-		Echvi_4192	0.40	+0.2
5,007,061	-		Echvi_4192	0.40	-1.0
5,007,061	-		Echvi_4192	0.40	+1.7
5,007,061	-		Echvi_4192	0.40	-1.6
5,007,061	-		Echvi_4192	0.40	+0.1
5,007,061	-		Echvi_4192	0.40	-1.8
5,007,061	-		Echvi_4192	0.40	-1.5
5,007,061	-		Echvi_4192	0.40	+0.4
5,007,061	-		Echvi_4192	0.40	-0.9
5,007,061	-		Echvi_4192	0.40	-2.7
5,007,062	+		Echvi_4192	0.40	+0.4
5,007,145	+		Echvi_4192	0.46	-0.5
5,007,148	+		Echvi_4192	0.46	+0.3
5,007,149	-		Echvi_4192	0.46	+1.4
5,007,173	+		Echvi_4192	0.47	-1.2
5,007,186	-		Echvi_4192	0.48	-1.4
5,007,186	-		Echvi_4192	0.48	+0.8
5,007,186	-		Echvi_4192	0.48	+0.8
5,007,355	+		Echvi_4192	0.59	-0.4
5,007,356	-		Echvi_4192	0.59	+0.6
5,007,371	+		Echvi_4192	0.60	-0.7
5,007,371	+		Echvi_4192	0.60	-0.5
5,007,371	+		Echvi_4192	0.60	-0.5
5,007,372	-		Echvi_4192	0.60	+0.2
5,007,372	-		Echvi_4192	0.60	-0.4
5,007,372	-		Echvi_4192	0.60	-1.0
5,007,375	+		Echvi_4192	0.61	-0.6
5,007,375	+		Echvi_4192	0.61	-0.4
5,007,375	+		Echvi_4192	0.61	-1.1
5,007,375	+		Echvi_4192	0.61	-0.1
5,007,375	+		Echvi_4192	0.61	-0.3
5,007,375	+		Echvi_4192	0.61	-0.2
5,007,375	+		Echvi_4192	0.61	+0.4
5,007,375	+		Echvi_4192	0.61	-0.5
5,007,375	+		Echvi_4192	0.61	+1.4
5,007,375	+		Echvi_4192	0.61	+0.1
5,007,375	+		Echvi_4192	0.61	-1.1
5,007,375	+		Echvi_4192	0.61	+0.9
5,007,375	+		Echvi_4192	0.61	-0.3
5,007,375	+		Echvi_4192	0.61	-0.7
5,007,375	+		Echvi_4192	0.61	-0.7
5,007,376	-		Echvi_4192	0.61	+0.5
5,007,376	-		Echvi_4192	0.61	-0.2
5,007,376	-		Echvi_4192	0.61	+0.1
5,007,376	-		Echvi_4192	0.61	+0.3
5,007,376	-		Echvi_4192	0.61	-0.4
5,007,376	-		Echvi_4192	0.61	-0.8
5,007,376	-		Echvi_4192	0.61	-1.0
5,007,380	-		Echvi_4192	0.61	+0.6
5,007,404	+		Echvi_4192	0.63	+0.7
5,007,404	+		Echvi_4192	0.63	-0.5
5,007,405	-		Echvi_4192	0.63	-0.1
5,007,405	-		Echvi_4192	0.63	-0.2
5,007,410	+		Echvi_4192	0.63	-0.3
5,007,410	+		Echvi_4192	0.63	-0.9
5,007,410	+		Echvi_4192	0.63	-1.1
5,007,410	+		Echvi_4192	0.63	-0.5
5,007,410	+		Echvi_4192	0.63	-0.1
5,007,411	-		Echvi_4192	0.63	-0.9
5,007,411	-		Echvi_4192	0.63	-1.4
5,007,411	-		Echvi_4192	0.63	-0.1
5,007,496	-		Echvi_4192	0.69	+0.6
5,007,518	+		Echvi_4192	0.70	-0.4
5,007,518	+		Echvi_4192	0.70	+0.3
5,007,518	+		Echvi_4192	0.70	-1.0
5,007,518	+		Echvi_4192	0.70	-1.2
5,007,519	-		Echvi_4192	0.70	+0.2
5,007,519	-		Echvi_4192	0.70	+0.1
5,007,534	-		Echvi_4192	0.71	-1.3
5,007,534	-		Echvi_4192	0.71	+0.5
5,007,545	+		Echvi_4192	0.72	-2.0
5,007,546	-		Echvi_4192	0.72	-0.2
5,007,546	-		Echvi_4192	0.72	-0.1
5,007,581	-		Echvi_4192	0.74	+0.2
5,007,670	-		Echvi_4192	0.80	-1.3
5,007,670	-		Echvi_4192	0.80	+1.3
5,007,975	-				+1.3
5,007,975	-				-1.1
5,007,975	-				-0.2
5,008,009	+				-0.8
5,008,078	+		Echvi_4193	0.12	+0.1
5,008,192	+		Echvi_4193	0.50	+0.6
5,008,192	+		Echvi_4193	0.50	+0.1
5,008,193	-		Echvi_4193	0.51	-0.4
5,008,193	-		Echvi_4193	0.51	+0.4
5,008,193	-		Echvi_4193	0.51	+1.8
5,008,193	-		Echvi_4193	0.51	-0.4
5,008,340	-				-0.1
5,008,340	-				+0.0
5,008,340	-				+0.7
5,008,340	-				+0.8
5,008,357	+				+0.5
5,008,357	+				+1.4
5,008,358	-				-0.3
5,008,504	+		Echvi_4194	0.49	-0.6
5,008,505	-		Echvi_4194	0.50	+0.3
5,008,508	-		Echvi_4194	0.51	-0.2
5,008,508	-		Echvi_4194	0.51	-0.6
5,008,509	+		Echvi_4194	0.51	-0.7
5,008,510	-		Echvi_4194	0.52	-0.0
5,008,510	-		Echvi_4194	0.52	-0.3
5,008,740	+				-0.7
5,008,812	-				+0.2