Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3441

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
4,070,376	+				+0.3
4,070,388	+				+2.8
4,070,388	+				-0.6
4,070,388	+				+1.3
4,070,389	-				-3.6
4,070,405	-				-1.5
4,070,405	-				-0.3
4,070,409	-				+0.2
4,070,409	-				+1.0
4,070,410	+				+0.8
4,070,446	+				+0.9
4,070,447	-				+1.8
4,070,798	-		Echvi_3440	0.56	+1.1
4,070,835	+		Echvi_3440	0.61	+1.3
4,070,862	+		Echvi_3440	0.65	+1.2
4,070,864	+		Echvi_3440	0.65	-0.8
4,070,889	-		Echvi_3440	0.69	-0.2
4,071,111	+				+0.4
4,071,111	+				+0.9
4,071,112	-				-0.3
4,071,214	+				-0.9
4,071,254	+				+0.1
4,071,254	+				-0.2
4,071,937	+				+1.3
4,071,958	+				-0.4
4,071,985	+				+1.2
4,071,988	+				+1.2
4,072,034	+				-0.5
4,072,035	-				-1.0
4,072,055	+				+1.1
4,072,055	+				+1.0
4,072,055	+				-1.0
4,072,061	+				+1.5
4,072,148	+		Echvi_3442	0.23	+1.8
4,072,149	-		Echvi_3442	0.24	-2.1
4,072,149	-		Echvi_3442	0.24	-1.2
4,072,257	+		Echvi_3442	0.42	+1.6
4,072,261	+		Echvi_3442	0.43	+0.1
4,072,310	+		Echvi_3442	0.52	+1.6
4,072,310	+		Echvi_3442	0.52	-2.0
4,072,348	+		Echvi_3442	0.58	-0.0
4,072,348	+		Echvi_3442	0.58	+2.5
4,072,464	+		Echvi_3442	0.79	+2.8
4,072,465	-		Echvi_3442	0.79	-2.1
4,072,466	+		Echvi_3442	0.79	-1.0
4,072,466	+		Echvi_3442	0.79	-0.2
4,072,466	+		Echvi_3442	0.79	+1.8
4,072,467	-		Echvi_3442	0.79	-1.0
4,072,528	-				-0.6
4,072,528	-				+0.9
4,072,528	-				+0.5
4,072,604	+				+0.5
4,072,606	+				+1.3
4,072,606	+				+1.2
4,072,611	+				+3.6
4,072,625	+				+1.2
4,072,626	-				-0.6
4,072,631	+				-0.2
4,072,636	+				-0.8
4,072,636	+				+0.2
4,072,636	+				-0.0
4,072,692	+				+0.6
4,072,692	+				+1.2
4,072,813	-				-2.3
4,072,829	-		Echvi_3443	0.10	+1.0
4,072,877	-		Echvi_3443	0.13	-1.2
4,072,877	-		Echvi_3443	0.13	+0.2
4,072,880	+		Echvi_3443	0.13	-2.3
4,072,880	+		Echvi_3443	0.13	-1.0
4,072,881	-		Echvi_3443	0.13	-2.3
4,072,881	-		Echvi_3443	0.13	-1.2
4,072,881	-		Echvi_3443	0.13	-0.5
4,072,881	-		Echvi_3443	0.13	-0.6