Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2962

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
3,537,062	-				-1.3
3,537,139	+				+3.4
3,537,139	+				-0.6
3,537,139	+				+1.4
3,537,248	+		Echvi_2960	0.54	+0.3
3,537,314	+		Echvi_2960	0.87	-0.8
3,537,315	-		Echvi_2960	0.87	-1.0
3,537,315	-		Echvi_2960	0.87	+0.5
3,537,317	+		Echvi_2960	0.88	-1.0
3,537,317	+		Echvi_2960	0.88	-1.5
3,537,318	-		Echvi_2960	0.89	-0.8
3,537,318	-		Echvi_2960	0.89	-0.8
3,537,353	+				+0.4
3,537,353	+				-1.1
3,537,363	+				-1.9
3,537,384	-				+0.2
3,537,461	+				-0.6
3,537,620	+				-3.0
3,537,621	-				+1.8
3,537,697	-				+0.1
3,537,863	-				-0.0
3,537,934	-				-1.4
3,537,997	-		Echvi_2961	0.45	+0.6
3,537,997	-		Echvi_2961	0.45	-0.7
3,538,000	-		Echvi_2961	0.48	-0.3
3,538,052	+				+1.8
3,538,052	+				+0.8
3,538,053	-				-0.2
3,538,109	+				+0.4
3,538,129	-				-2.7
3,538,130	+				-0.1
3,538,130	+				+0.9
3,538,143	-				+0.4
3,538,191	-		Echvi_2962	0.11	-1.9
3,538,201	+		Echvi_2962	0.11	+1.6
3,538,223	-		Echvi_2962	0.13	+0.1
3,538,223	-		Echvi_2962	0.13	-2.4
3,538,225	-		Echvi_2962	0.13	-0.5
3,538,265	-		Echvi_2962	0.16	-1.7
3,538,274	-		Echvi_2962	0.17	+0.0
3,538,314	+		Echvi_2962	0.19	-0.2
3,538,318	+		Echvi_2962	0.20	+1.2
3,538,319	-		Echvi_2962	0.20	-0.3
3,538,394	-		Echvi_2962	0.25	-0.5
3,538,411	+		Echvi_2962	0.26	+1.6
3,538,411	+		Echvi_2962	0.26	-0.5
3,538,411	+		Echvi_2962	0.26	+0.2
3,538,412	-		Echvi_2962	0.27	-0.3
3,538,412	-		Echvi_2962	0.27	-2.2
3,538,412	-		Echvi_2962	0.27	+0.8
3,538,412	-		Echvi_2962	0.27	+0.1
3,538,416	-		Echvi_2962	0.27	+0.3
3,538,421	+		Echvi_2962	0.27	-0.8
3,538,421	+		Echvi_2962	0.27	-0.4
3,538,422	-		Echvi_2962	0.27	-1.3
3,538,555	-		Echvi_2962	0.37	-1.5
3,538,586	-		Echvi_2962	0.39	-0.6
3,538,629	+		Echvi_2962	0.42	+1.1
3,538,629	+		Echvi_2962	0.42	-1.3
3,538,630	-		Echvi_2962	0.42	+0.4
3,538,633	+		Echvi_2962	0.42	-0.4
3,538,634	-		Echvi_2962	0.43	-0.3
3,538,649	-		Echvi_2962	0.44	-0.2
3,538,659	-		Echvi_2962	0.44	-1.1
3,538,660	+		Echvi_2962	0.44	+1.5
3,538,664	-		Echvi_2962	0.45	+0.5
3,538,664	-		Echvi_2962	0.45	-0.4
3,538,810	+		Echvi_2962	0.55	-0.7
3,538,810	+		Echvi_2962	0.55	-0.6
3,538,811	-		Echvi_2962	0.55	-0.8
3,538,839	-		Echvi_2962	0.57	-0.8
3,538,891	+		Echvi_2962	0.61	-0.2
3,538,897	+		Echvi_2962	0.62	-1.3
3,538,898	-		Echvi_2962	0.62	+0.4
3,538,898	-		Echvi_2962	0.62	+1.2
3,538,898	-		Echvi_2962	0.62	+0.2
3,538,898	-		Echvi_2962	0.62	+0.3
3,538,898	-		Echvi_2962	0.62	-0.5
3,538,898	-		Echvi_2962	0.62	+0.1
3,538,930	+		Echvi_2962	0.64	+0.4
3,538,931	-		Echvi_2962	0.64	-1.1
3,538,947	-		Echvi_2962	0.65	-1.2
3,539,109	+		Echvi_2962	0.77	-2.1
3,539,110	-		Echvi_2962	0.77	+1.8
3,539,110	-		Echvi_2962	0.77	-1.8
3,539,110	-		Echvi_2962	0.77	+1.5
3,539,114	+		Echvi_2962	0.77	-1.4
3,539,115	-		Echvi_2962	0.77	+0.7
3,539,115	-		Echvi_2962	0.77	+0.3
3,539,144	-		Echvi_2962	0.79	+0.8
3,539,144	-		Echvi_2962	0.79	+1.4
3,539,156	+		Echvi_2962	0.80	+1.9
3,539,157	-		Echvi_2962	0.80	-1.1
3,539,184	-		Echvi_2962	0.82	-0.2
3,539,191	-		Echvi_2962	0.83	+1.1
3,539,242	-		Echvi_2962	0.86	-0.2
3,539,276	-		Echvi_2962	0.89	+0.4
3,539,294	+				+0.4
3,539,348	-				-1.2
3,539,434	+				-1.4
3,539,434	+				+0.3
3,539,435	-				-0.2
3,539,435	-				+0.1
3,539,536	+				-0.8
3,539,600	+				+0.0
3,539,604	+				+0.3
3,539,878	+				-0.5
3,539,896	+				-1.6
3,539,896	+				+0.1
3,539,902	+				-0.4
3,539,908	+				+0.2
3,539,908	+				+0.2
3,539,918	+				-1.1
3,539,935	+				+1.7
3,539,936	-				-0.6
3,539,939	+				-1.6
3,539,939	+				-1.7
3,539,948	+				-1.5
3,539,948	+				+0.2
3,539,948	+				-1.8
3,539,964	-				+0.2
3,540,004	-				-1.2
3,540,045	-				+1.6
3,540,048	-				+0.2
3,540,056	+				-2.7
3,540,066	-				+0.8
3,540,074	+				+1.1
3,540,077	+				-1.3
3,540,121	-				+1.5
3,540,121	-				+0.1
3,540,146	+				-0.4
3,540,146	+				+0.5
3,540,146	+				-0.2
3,540,171	+				-0.5
3,540,231	+				-0.0
3,540,282	+		Echvi_2963	0.11	-2.6
3,540,282	+		Echvi_2963	0.11	-0.7
3,540,306	+		Echvi_2963	0.12	-0.5
3,540,306	+		Echvi_2963	0.12	+0.8
3,540,307	-		Echvi_2963	0.13	+0.8