Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1053

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
1,213,623	+				-0.2
1,213,624	-				+0.1
1,213,645	-				+0.7
1,213,655	-				-1.9
1,213,655	-				-1.0
1,213,713	+				+0.0
1,213,713	+				-0.8
1,213,713	+				-0.4
1,213,713	+				-0.9
1,213,713	+				+0.9
1,213,713	+				-2.2
1,213,714	-				+0.3
1,213,714	-				+0.7
1,213,714	-				+0.3
1,213,715	+				-0.0
1,213,715	+				+1.1
1,213,715	+				+0.2
1,213,715	+				+0.2
1,213,715	+				+0.6
1,213,715	+				-0.8
1,213,716	-				-0.5
1,213,743	+				+0.0
1,213,744	-				+0.1
1,213,760	-				+0.6
1,213,762	-				+0.1
1,213,819	-				+0.1
1,213,821	-				-0.4
1,213,841	-				-0.7
1,213,843	+				-2.8
1,213,844	-				-0.1
1,213,844	-				-0.5
1,213,851	+				-1.0
1,213,851	+				-1.1
1,213,852	-				-0.3
1,213,855	+				+1.1
1,213,946	+				-1.0
1,213,971	+				+1.6
1,213,999	+				-0.3
1,213,999	+				-0.5
1,213,999	+				+1.0
1,214,029	+				-0.4
1,214,029	+				-0.5
1,214,046	+		Echvi_1052	0.12	+0.2
1,214,071	-		Echvi_1052	0.16	+1.4
1,214,073	+		Echvi_1052	0.17	-1.3
1,214,074	-		Echvi_1052	0.17	+0.7
1,214,074	-		Echvi_1052	0.17	-0.9
1,214,077	+		Echvi_1052	0.17	+2.4
1,214,077	+		Echvi_1052	0.17	+2.1
1,214,077	+		Echvi_1052	0.17	-1.4
1,214,078	-		Echvi_1052	0.18	+0.2
1,214,078	-		Echvi_1052	0.18	+0.0
1,214,078	-		Echvi_1052	0.18	-2.2
1,214,171	-		Echvi_1052	0.34	+0.8
1,214,172	+		Echvi_1052	0.34	+0.3
1,214,172	+		Echvi_1052	0.34	+0.2
1,214,282	+		Echvi_1052	0.53	+1.1
1,214,305	-		Echvi_1052	0.57	+0.7
1,214,308	-		Echvi_1052	0.57	+0.7
1,214,368	+		Echvi_1052	0.67	-0.4
1,214,368	+		Echvi_1052	0.67	-0.5
1,214,369	-		Echvi_1052	0.68	-0.9
1,214,406	-		Echvi_1052	0.74	-0.7
1,214,426	-		Echvi_1052	0.77	-0.8
1,214,432	-		Echvi_1052	0.78	-0.8
1,214,450	+		Echvi_1052	0.81	+0.7
1,214,451	-		Echvi_1052	0.82	-0.8
1,214,451	-		Echvi_1052	0.82	-0.5
1,214,458	+		Echvi_1052	0.83	-0.5
1,214,515	+				+1.0
1,214,515	+				-0.9
1,214,516	-				+0.2
1,214,528	+				+0.1
1,214,528	+				+0.2
1,214,528	+				-0.9
1,214,528	+				-1.9
1,214,528	+				-0.0
1,214,529	-				+1.0
1,214,529	-				-1.4
1,214,529	-				-0.1
1,214,532	+				-0.2
1,214,533	-				-0.4
1,214,552	+				-0.9
1,214,557	+				-0.3
1,214,558	-				-1.4
1,214,558	-				+1.5
1,214,558	-				-0.9
1,214,558	-				+3.1
1,214,558	-				-2.0
1,214,564	-				-0.1
1,214,564	-				-0.5
1,214,570	+				-0.8
1,214,571	-				+0.6
1,214,583	-				+1.8
1,214,583	-				+0.2
1,214,583	-				-0.2
1,214,620	+				-1.6
1,214,621	-				+0.8
1,214,635	+				+0.1
1,214,635	+				+0.5
1,214,636	-				-1.5
1,214,662	+				-1.2
1,214,662	+				+0.1
1,214,663	-				+0.3
1,214,663	-				-0.3
1,214,663	-				+0.7
1,214,663	-				+1.1
1,214,680	+		Echvi_1053	0.11	-1.1
1,214,794	-		Echvi_1053	0.27	-0.9
1,214,799	+		Echvi_1053	0.28	+2.1
1,214,799	+		Echvi_1053	0.28	-1.9
1,214,799	+		Echvi_1053	0.28	-1.3
1,214,799	+		Echvi_1053	0.28	-0.3
1,214,817	+		Echvi_1053	0.31	-3.1
1,214,818	-		Echvi_1053	0.31	-1.3
1,214,898	+		Echvi_1053	0.42	-0.3
1,214,900	+		Echvi_1053	0.43	-0.3
1,214,900	+		Echvi_1053	0.43	-1.2
1,214,901	-		Echvi_1053	0.43	-1.4
1,214,980	-		Echvi_1053	0.54	-0.0
1,214,996	-		Echvi_1053	0.56	-1.3
1,215,041	-		Echvi_1053	0.63	-0.7
1,215,107	-		Echvi_1053	0.72	-0.2
1,215,239	-				+0.2
1,215,239	-				+0.1
1,215,239	-				+0.9
1,215,260	-				+0.1
1,215,268	+				+0.6
1,215,314	+				-1.5
1,215,314	+				-1.1
1,215,315	-				-0.0
1,215,315	-				+1.2
1,215,321	-				+0.3
1,215,335	+				-1.7
1,215,342	+				+0.5
1,215,345	-				+0.6
1,215,352	-				-0.1
1,215,355	+				-1.4
1,215,371	+				-0.4
1,215,372	-				+1.9
1,215,373	+				-2.4
1,215,373	+				-1.4
1,215,373	+				-1.8
1,215,408	-				-0.2
1,215,427	+		Echvi_1054	0.13	-2.7
1,215,552	+		Echvi_1054	0.48	-0.7
1,215,552	+		Echvi_1054	0.48	-0.7
1,215,600	+		Echvi_1054	0.62	-0.9
1,215,601	-		Echvi_1054	0.62	+2.6
1,215,648	+		Echvi_1054	0.75	-1.3
1,215,648	+		Echvi_1054	0.75	+1.1
1,216,086	-				+1.5
1,216,192	+				-0.3
1,216,194	+				-1.5
1,216,194	+				-2.0
1,216,274	+		Echvi_1056	0.13	-0.5
1,216,283	+		Echvi_1056	0.14	-2.5