Experiment: m.b. Vancomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0277 and Echvi_0278 are separated by 516 nucleotides Echvi_0278 and Echvi_0279 are separated by 183 nucleotides
Echvi_0277: Echvi_0277 - ribosome recycling factor, at 280,523 to 281,083
_0277
Echvi_0278: Echvi_0278 - hypothetical protein, at 281,600 to 281,740
_0278
Echvi_0279: Echvi_0279 - hypothetical protein, at 281,924 to 284,566
_0279
Position (kb) 281
282
283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 281.081 kb on + strand at 281.081 kb on + strand at 281.081 kb on + strand at 281.081 kb on + strand at 281.082 kb on - strand at 281.085 kb on + strand at 281.101 kb on - strand at 281.101 kb on - strand at 281.143 kb on - strand at 281.143 kb on - strand at 281.147 kb on + strand at 281.147 kb on + strand at 281.148 kb on - strand at 281.148 kb on - strand at 281.192 kb on + strand at 281.195 kb on + strand at 281.200 kb on + strand at 281.200 kb on + strand at 281.200 kb on + strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.258 kb on + strand at 281.259 kb on - strand at 281.334 kb on + strand at 281.347 kb on + strand at 281.353 kb on + strand at 281.449 kb on - strand at 281.452 kb on + strand at 281.482 kb on - strand at 281.484 kb on + strand at 281.509 kb on + strand at 281.509 kb on + strand at 281.509 kb on + strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.512 kb on + strand at 281.512 kb on + strand at 281.513 kb on - strand at 281.519 kb on + strand at 281.519 kb on + strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.554 kb on + strand at 281.554 kb on + strand at 281.555 kb on - strand at 281.555 kb on - strand at 281.555 kb on - strand at 281.625 kb on - strand, within Echvi_0278 at 281.625 kb on - strand, within Echvi_0278 at 281.637 kb on + strand, within Echvi_0278 at 281.638 kb on - strand, within Echvi_0278 at 281.638 kb on - strand, within Echvi_0278 at 281.644 kb on + strand, within Echvi_0278 at 281.644 kb on + strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.646 kb on + strand, within Echvi_0278 at 281.647 kb on - strand, within Echvi_0278 at 281.714 kb on + strand, within Echvi_0278 at 281.718 kb on - strand, within Echvi_0278 at 281.726 kb on - strand, within Echvi_0278 at 281.728 kb on + strand at 281.728 kb on + strand at 281.728 kb on + strand at 281.728 kb on + strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.731 kb on + strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.741 kb on - strand at 281.750 kb on + strand at 281.803 kb on - strand at 281.813 kb on + strand at 281.814 kb on - strand at 281.814 kb on - strand at 281.815 kb on + strand at 281.816 kb on - strand at 281.901 kb on - strand at 281.944 kb on + strand at 281.945 kb on - strand at 281.947 kb on + strand at 281.957 kb on + strand at 281.985 kb on + strand at 282.093 kb on + strand at 282.093 kb on + strand at 282.172 kb on - strand at 282.214 kb on + strand, within Echvi_0279 at 282.214 kb on + strand, within Echvi_0279 at 282.219 kb on + strand, within Echvi_0279 at 282.234 kb on + strand at 282.235 kb on - strand, within Echvi_0279 at 282.256 kb on + strand, within Echvi_0279 at 282.291 kb on + strand, within Echvi_0279 at 282.292 kb on - strand, within Echvi_0279 at 282.304 kb on - strand, within Echvi_0279 at 282.455 kb on - strand, within Echvi_0279 at 282.481 kb on + strand, within Echvi_0279 at 282.496 kb on - strand, within Echvi_0279 at 282.520 kb on - strand, within Echvi_0279 at 282.624 kb on + strand, within Echvi_0279 at 282.624 kb on + strand, within Echvi_0279 at 282.625 kb on - strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.701 kb on + strand, within Echvi_0279 at 282.701 kb on + strand, within Echvi_0279 at 282.702 kb on - strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.778 kb on - strand, within Echvi_0279 at 282.849 kb on + strand, within Echvi_0279 at 282.855 kb on + strand, within Echvi_0279 at 282.855 kb on + strand, within Echvi_0279 at 282.877 kb on - strand, within Echvi_0279 at 282.887 kb on - strand, within Echvi_0279 at 282.972 kb on - strand, within Echvi_0279 at 282.986 kb on + strand, within Echvi_0279 at 283.045 kb on + strand, within Echvi_0279 at 283.046 kb on - strand, within Echvi_0279 at 283.122 kb on + strand, within Echvi_0279 at 283.136 kb on + strand, within Echvi_0279 at 283.136 kb on + strand, within Echvi_0279 at 283.137 kb on - strand, within Echvi_0279 at 283.290 kb on + strand, within Echvi_0279 at 283.291 kb on - strand, within Echvi_0279 at 283.340 kb on + strand, within Echvi_0279 at 283.341 kb on - strand, within Echvi_0279 at 283.341 kb on - strand, within Echvi_0279 at 283.346 kb on + strand, within Echvi_0279 at 283.427 kb on - strand, within Echvi_0279 at 283.500 kb on - strand, within Echvi_0279 at 283.568 kb on - strand, within Echvi_0279 at 283.578 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.583 kb on - strand, within Echvi_0279 at 283.585 kb on - strand, within Echvi_0279 at 283.595 kb on - strand, within Echvi_0279 at 283.622 kb on - strand, within Echvi_0279 at 283.623 kb on + strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.668 kb on + strand, within Echvi_0279 at 283.669 kb on - strand, within Echvi_0279 at 283.723 kb on + strand, within Echvi_0279 at 283.724 kb on - strand, within Echvi_0279 at 283.736 kb on + strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.750 kb on + strand, within Echvi_0279 at 283.750 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.753 kb on - strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.808 kb on - strand, within Echvi_0279 at 283.849 kb on + strand, within Echvi_0279 at 283.850 kb on - strand, within Echvi_0279 at 283.930 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.954 kb on + strand, within Echvi_0279 at 283.954 kb on + strand, within Echvi_0279 at 283.982 kb on + strand, within Echvi_0279 at 283.983 kb on - strand, within Echvi_0279 at 284.044 kb on - strand, within Echvi_0279 at 284.129 kb on - strand, within Echvi_0279 at 284.253 kb on + strand, within Echvi_0279 at 284.254 kb on - strand, within Echvi_0279 at 284.351 kb on - strand at 284.355 kb on + strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.359 kb on - strand at 284.423 kb on - strand at 284.443 kb on - strand at 284.546 kb on - strand at 284.567 kb on - strand at 284.586 kb on - strand at 284.605 kb on + strand at 284.620 kb on + strand at 284.649 kb on + strand at 284.776 kb on - strand at 284.776 kb on - strand at 284.776 kb on - strand at 284.798 kb on + strand at 284.959 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.049 kb on - strand at 285.049 kb on - strand at 285.049 kb on - strand at 285.067 kb on - strand at 285.067 kb on - strand at 285.178 kb on + strand at 285.178 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.366 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.441 kb on - strand at 285.451 kb on - strand at 285.507 kb on + strand at 285.523 kb on - strand at 285.525 kb on - strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.564 kb on + strand at 285.565 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.06 mg/ml remove 281,081 + -0.7 281,081 + +2.4 281,081 + -0.4 281,081 + +0.5 281,082 - -0.9 281,085 + +1.0 281,101 - -0.2 281,101 - +0.6 281,143 - -0.4 281,143 - -0.7 281,147 + -0.0 281,147 + -0.1 281,148 - +1.2 281,148 - -1.1 281,192 + +0.9 281,195 + +0.9 281,200 + -2.1 281,200 + +0.3 281,200 + +0.1 281,201 - -1.8 281,201 - -0.4 281,201 - -0.8 281,201 - -0.2 281,258 + -0.1 281,259 - -0.1 281,334 + -0.3 281,347 + -0.4 281,353 + -1.9 281,449 - +0.1 281,452 + -1.1 281,482 - +0.0 281,484 + -0.3 281,509 + -0.8 281,509 + +0.9 281,509 + -0.8 281,510 - +0.1 281,510 - -0.4 281,510 - +0.4 281,510 - -0.1 281,512 + +1.5 281,512 + -1.5 281,513 - -0.1 281,519 + -0.1 281,519 + -0.4 281,551 - -0.8 281,551 - +0.9 281,551 - +0.4 281,551 - -1.7 281,554 + -0.5 281,554 + +0.9 281,555 - -1.3 281,555 - +0.7 281,555 - +0.1 281,625 - Echvi_0278 0.18 -0.6 281,625 - Echvi_0278 0.18 +0.5 281,637 + Echvi_0278 0.26 -0.5 281,638 - Echvi_0278 0.27 +0.2 281,638 - Echvi_0278 0.27 -0.7 281,644 + Echvi_0278 0.31 +0.1 281,644 + Echvi_0278 0.31 +0.6 281,645 - Echvi_0278 0.32 -0.9 281,645 - Echvi_0278 0.32 -1.6 281,645 - Echvi_0278 0.32 -0.2 281,645 - Echvi_0278 0.32 +1.0 281,645 - Echvi_0278 0.32 -0.5 281,646 + Echvi_0278 0.33 -0.8 281,647 - Echvi_0278 0.33 -1.2 281,714 + Echvi_0278 0.81 -0.6 281,718 - Echvi_0278 0.84 -0.1 281,726 - Echvi_0278 0.89 -1.5 281,728 + +0.2 281,728 + -0.4 281,728 + -0.4 281,728 + +0.4 281,729 - -0.5 281,729 - +2.3 281,729 - +1.9 281,729 - -0.5 281,731 + -1.2 281,732 - +1.1 281,732 - -0.5 281,732 - +0.4 281,732 - +0.1 281,732 - +0.5 281,732 - -0.6 281,732 - +1.6 281,732 - -1.0 281,735 + +1.2 281,735 + -0.0 281,735 + -0.1 281,735 + -0.4 281,735 + -1.6 281,735 + +0.0 281,735 + -0.3 281,735 + +0.4 281,736 - -1.3 281,736 - -0.7 281,736 - -0.5 281,736 - +0.1 281,736 - +0.7 281,736 - -0.1 281,741 - -1.0 281,750 + +0.8 281,803 - -0.2 281,813 + -0.5 281,814 - +0.7 281,814 - +0.5 281,815 + -0.1 281,816 - -1.3 281,901 - -0.3 281,944 + -0.7 281,945 - +0.7 281,947 + +0.6 281,957 + -0.3 281,985 + -0.6 282,093 + +0.7 282,093 + -0.2 282,172 - +0.1 282,214 + Echvi_0279 0.11 -1.7 282,214 + Echvi_0279 0.11 +0.0 282,219 + Echvi_0279 0.11 +0.6 282,234 + +0.9 282,235 - Echvi_0279 0.12 -0.9 282,256 + Echvi_0279 0.13 +0.0 282,291 + Echvi_0279 0.14 +0.7 282,292 - Echvi_0279 0.14 +0.4 282,304 - Echvi_0279 0.14 -0.7 282,455 - Echvi_0279 0.20 -0.3 282,481 + Echvi_0279 0.21 +1.0 282,496 - Echvi_0279 0.22 -0.8 282,520 - Echvi_0279 0.23 -1.8 282,624 + Echvi_0279 0.26 +1.1 282,624 + Echvi_0279 0.26 +0.0 282,625 - Echvi_0279 0.27 -1.1 282,658 + Echvi_0279 0.28 +0.2 282,658 + Echvi_0279 0.28 -0.1 282,658 + Echvi_0279 0.28 -0.8 282,658 + Echvi_0279 0.28 +1.1 282,701 + Echvi_0279 0.29 +0.9 282,701 + Echvi_0279 0.29 +0.4 282,702 - Echvi_0279 0.29 +0.3 282,703 + Echvi_0279 0.29 +0.5 282,703 + Echvi_0279 0.29 -0.5 282,703 + Echvi_0279 0.29 +0.1 282,703 + Echvi_0279 0.29 -1.6 282,704 - Echvi_0279 0.30 -0.3 282,704 - Echvi_0279 0.30 +0.4 282,704 - Echvi_0279 0.30 +0.6 282,778 - Echvi_0279 0.32 +0.1 282,849 + Echvi_0279 0.35 +0.4 282,855 + Echvi_0279 0.35 -0.1 282,855 + Echvi_0279 0.35 -0.7 282,877 - Echvi_0279 0.36 -0.0 282,887 - Echvi_0279 0.36 -1.4 282,972 - Echvi_0279 0.40 -0.5 282,986 + Echvi_0279 0.40 -0.2 283,045 + Echvi_0279 0.42 -0.5 283,046 - Echvi_0279 0.42 +1.3 283,122 + Echvi_0279 0.45 -0.5 283,136 + Echvi_0279 0.46 +0.9 283,136 + Echvi_0279 0.46 -0.7 283,137 - Echvi_0279 0.46 +1.2 283,290 + Echvi_0279 0.52 -0.1 283,291 - Echvi_0279 0.52 -0.7 283,340 + Echvi_0279 0.54 -0.6 283,341 - Echvi_0279 0.54 +1.0 283,341 - Echvi_0279 0.54 +0.1 283,346 + Echvi_0279 0.54 -0.1 283,427 - Echvi_0279 0.57 -1.1 283,500 - Echvi_0279 0.60 -1.5 283,568 - Echvi_0279 0.62 +0.6 283,578 + Echvi_0279 0.63 -0.3 283,582 + Echvi_0279 0.63 +0.0 283,582 + Echvi_0279 0.63 +1.2 283,582 + Echvi_0279 0.63 +0.0 283,582 + Echvi_0279 0.63 +0.9 283,582 + Echvi_0279 0.63 +0.2 283,582 + Echvi_0279 0.63 -0.2 283,582 + Echvi_0279 0.63 -0.9 283,582 + Echvi_0279 0.63 +0.3 283,582 + Echvi_0279 0.63 +2.1 283,583 - Echvi_0279 0.63 +0.2 283,585 - Echvi_0279 0.63 +0.9 283,595 - Echvi_0279 0.63 -0.8 283,622 - Echvi_0279 0.64 -0.8 283,623 + Echvi_0279 0.64 +0.0 283,624 - Echvi_0279 0.64 -0.3 283,624 - Echvi_0279 0.64 +0.0 283,624 - Echvi_0279 0.64 +0.6 283,668 + Echvi_0279 0.66 -0.6 283,669 - Echvi_0279 0.66 +0.0 283,723 + Echvi_0279 0.68 +0.7 283,724 - Echvi_0279 0.68 -0.1 283,736 + Echvi_0279 0.69 -0.9 283,737 - Echvi_0279 0.69 +0.3 283,737 - Echvi_0279 0.69 +0.9 283,737 - Echvi_0279 0.69 +0.7 283,750 + Echvi_0279 0.69 +0.0 283,750 + Echvi_0279 0.69 +0.9 283,752 + Echvi_0279 0.69 -0.4 283,752 + Echvi_0279 0.69 +1.3 283,752 + Echvi_0279 0.69 -0.2 283,753 - Echvi_0279 0.69 -0.5 283,756 + Echvi_0279 0.69 -0.1 283,756 + Echvi_0279 0.69 -1.5 283,756 + Echvi_0279 0.69 +0.1 283,756 + Echvi_0279 0.69 +0.6 283,756 + Echvi_0279 0.69 +2.2 283,756 + Echvi_0279 0.69 -0.6 283,757 - Echvi_0279 0.69 +0.7 283,757 - Echvi_0279 0.69 +0.7 283,757 - Echvi_0279 0.69 -0.9 283,757 - Echvi_0279 0.69 +0.9 283,757 - Echvi_0279 0.69 +1.4 283,808 - Echvi_0279 0.71 -0.4 283,849 + Echvi_0279 0.73 +0.3 283,850 - Echvi_0279 0.73 +1.4 283,930 + Echvi_0279 0.76 +1.5 283,932 + Echvi_0279 0.76 -0.3 283,932 + Echvi_0279 0.76 +0.9 283,932 + Echvi_0279 0.76 +0.4 283,932 + Echvi_0279 0.76 +2.2 283,954 + Echvi_0279 0.77 +1.7 283,954 + Echvi_0279 0.77 -0.9 283,982 + Echvi_0279 0.78 +0.9 283,983 - Echvi_0279 0.78 +1.0 284,044 - Echvi_0279 0.80 -1.3 284,129 - Echvi_0279 0.83 +0.2 284,253 + Echvi_0279 0.88 +0.5 284,254 - Echvi_0279 0.88 +0.6 284,351 - -1.3 284,355 + -0.3 284,356 - +1.1 284,356 - -0.1 284,356 - -0.1 284,356 - +0.0 284,359 - +0.2 284,423 - +0.3 284,443 - +0.9 284,546 - -0.1 284,567 - -3.1 284,586 - -0.7 284,605 + +0.7 284,620 + +1.6 284,649 + -0.1 284,776 - -1.4 284,776 - +0.9 284,776 - -0.7 284,798 + -0.1 284,959 - +1.5 285,042 - -0.1 285,042 - -0.9 285,042 - +0.9 285,042 - -0.5 285,049 - -0.9 285,049 - +0.9 285,049 - -0.7 285,067 - -0.5 285,067 - -0.7 285,178 + -0.7 285,178 + -3.3 285,281 + +1.6 285,281 + -3.4 285,281 + +1.2 285,281 + -0.4 285,366 + -0.2 285,368 + -1.9 285,368 + -0.4 285,368 + +0.7 285,440 + -0.3 285,440 + -1.0 285,440 + -1.2 285,441 - -1.5 285,451 - +1.9 285,507 + -1.5 285,523 - +0.2 285,525 - -1.6 285,551 + -1.5 285,551 + -2.9 285,551 + -1.1 285,564 + -2.4 285,565 - -0.3
Or see this region's nucleotide sequence