Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0135

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
133,560	+		Echvi_0133	0.80	+1.1
133,564	-		Echvi_0133	0.80	-0.1
133,571	+		Echvi_0133	0.81	-1.2
133,571	+		Echvi_0133	0.81	-0.0
133,571	+		Echvi_0133	0.81	-1.7
133,572	-		Echvi_0133	0.81	+0.3
133,572	-		Echvi_0133	0.81	+1.2
133,596	+		Echvi_0133	0.82	+0.9
133,596	+		Echvi_0133	0.82	+0.6
133,596	+		Echvi_0133	0.82	-0.4
133,597	-		Echvi_0133	0.82	+0.9
133,597	-		Echvi_0133	0.82	+1.3
133,638	-		Echvi_0133	0.85	-0.7
133,690	-		Echvi_0133	0.88	-0.2
133,690	-				-0.1
133,765	-				+0.9
133,765	-				-0.3
133,765	-				-0.4
133,768	-				-1.6
133,873	-				-0.0
133,912	+		Echvi_0134	0.28	+0.1
133,933	+		Echvi_0134	0.32	-1.6
133,933	+		Echvi_0134	0.32	+0.5
133,934	-		Echvi_0134	0.32	+0.6
133,963	+		Echvi_0134	0.38	-1.3
134,003	-		Echvi_0134	0.45	+1.2
134,003	-		Echvi_0134	0.45	+0.9
134,013	+		Echvi_0134	0.47	+0.1
134,034	-		Echvi_0134	0.51	+0.7
134,034	-		Echvi_0134	0.51	+0.5
134,034	-		Echvi_0134	0.51	-1.4
134,220	-		Echvi_0134	0.87	+0.9
134,237	+				-0.3
134,279	+				-0.9
134,279	+				-0.7
134,279	+				-0.3
134,279	+				-0.7
134,279	+				-0.1
134,280	-				+1.4
134,280	-				-0.1
134,356	+				+1.3
134,359	+		Echvi_0135	0.10	+1.4
134,434	-		Echvi_0135	0.18	+0.6
134,514	-		Echvi_0135	0.26	+0.9
134,528	+		Echvi_0135	0.27	+0.6
134,556	+		Echvi_0135	0.30	+0.2
134,635	-		Echvi_0135	0.38	+0.9
134,635	-		Echvi_0135	0.38	+1.2
134,690	+		Echvi_0135	0.43	-0.2
134,859	-		Echvi_0135	0.60	-0.1
134,883	+		Echvi_0135	0.62	+1.3
134,883	+		Echvi_0135	0.62	+0.5
134,884	-		Echvi_0135	0.62	+0.9
134,951	+		Echvi_0135	0.69	+0.4
134,997	+		Echvi_0135	0.74	-1.4
135,087	-		Echvi_0135	0.82	-0.8
135,239	+				+0.1
135,255	+				+1.5
135,256	-				-1.6
135,264	-				+0.9
135,264	-				+0.4
135,264	-				+0.6
135,267	-				-0.6
135,267	-				+0.9
135,267	-				+1.9
135,269	-				+0.4
135,271	+				-0.5
135,271	+				-0.1
135,271	+				-0.5
135,272	-				+0.7
135,276	-				-0.0
135,287	+				-0.7
135,287	+				+0.8
135,297	+				+0.9
135,454	+		Echvi_0136	0.40	-1.0
135,454	+		Echvi_0136	0.40	+0.9
135,455	-		Echvi_0136	0.40	+0.9
135,464	+		Echvi_0136	0.42	+1.0
135,465	-		Echvi_0136	0.42	-0.3
135,498	+		Echvi_0136	0.50	+0.1
135,531	+		Echvi_0136	0.57	-0.3
135,531	+		Echvi_0136	0.57	+0.1
135,531	+		Echvi_0136	0.57	-0.3
135,532	-		Echvi_0136	0.57	+0.9
135,533	+		Echvi_0136	0.57	-1.1
135,541	-		Echvi_0136	0.59	-2.2
135,703	-				+1.5
135,762	-				-0.2
135,793	+				+0.5
135,886	+				-0.4
135,911	+				-0.2
135,911	+				-0.1
135,911	+				-0.6
135,912	-				-1.5
135,933	-				+1.9
135,975	+				+0.3
135,976	-				+1.3
135,976	-				+0.9