Strain Fitness in Escherichia coli BW25113 around b4065

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
4,277,301	-	yjcD	b4064	0.59	+0.3
4,277,308	+	yjcD	b4064	0.60	+1.2
4,277,308	+	yjcD	b4064	0.60	+2.2
4,277,429	+	yjcD	b4064	0.69	-0.3
4,277,520	-	yjcD	b4064	0.75	+0.5
4,277,568	-	yjcD	b4064	0.79	+0.0
4,277,570	+	yjcD	b4064	0.79	+0.2
4,277,599	+	yjcD	b4064	0.81	-0.2
4,277,599	+	yjcD	b4064	0.81	+1.2
4,277,613	+	yjcD	b4064	0.82	-0.1
4,277,613	+	yjcD	b4064	0.82	+1.6
4,277,614	+	yjcD	b4064	0.82	+1.2
4,277,621	-	yjcD	b4064	0.83	-0.4
4,277,677	+	yjcD	b4064	0.87	-0.4
4,277,706	+	yjcD	b4064	0.89	-1.2
4,277,771	-				+0.9
4,277,771	-				-0.6
4,277,844	+				+0.0
4,277,846	+				+0.0
4,278,008	-				-1.0
4,278,008	-				+0.2
4,278,019	-				-0.6
4,278,058	-				-1.0
4,278,072	-				+1.0
4,278,115	+				+1.5
4,278,244	-	yjcE	b4065	0.15	-0.8
4,278,283	+	yjcE	b4065	0.17	-1.5
4,278,289	+	yjcE	b4065	0.17	-1.0
4,278,301	-	yjcE	b4065	0.18	-0.9
4,278,327	-	yjcE	b4065	0.20	-0.1
4,278,331	+	yjcE	b4065	0.20	+0.7
4,278,332	-	yjcE	b4065	0.20	-0.5
4,278,382	+	yjcE	b4065	0.23	+0.2
4,278,382	+	yjcE	b4065	0.23	-0.3
4,278,417	-	yjcE	b4065	0.25	+1.4
4,278,444	+	yjcE	b4065	0.27	-0.0
4,278,507	-	yjcE	b4065	0.31	+0.7
4,278,532	-	yjcE	b4065	0.32	-1.3
4,278,532	-	yjcE	b4065	0.32	-0.3
4,278,539	-	yjcE	b4065	0.32	-0.6
4,278,702	-	yjcE	b4065	0.42	+1.2
4,278,702	-	yjcE	b4065	0.42	+0.5
4,278,707	-	yjcE	b4065	0.43	-0.3
4,278,759	+	yjcE	b4065	0.46	+0.2
4,278,785	-	yjcE	b4065	0.47	-0.7
4,278,785	-	yjcE	b4065	0.47	+1.2
4,278,958	+	yjcE	b4065	0.58	-0.1
4,278,958	+	yjcE	b4065	0.58	+1.2
4,278,981	-	yjcE	b4065	0.59	+0.0
4,279,123	-	yjcE	b4065	0.68	-0.8
4,279,123	-	yjcE	b4065	0.68	+0.6
4,279,139	+	yjcE	b4065	0.69	-0.6
4,279,162	-	yjcE	b4065	0.70	-0.5
4,279,191	-	yjcE	b4065	0.72	-0.9
4,279,210	+	yjcE	b4065	0.73	+0.5
4,279,245	-	yjcE	b4065	0.75	+0.7
4,279,249	+	yjcE	b4065	0.76	-1.2
4,279,249	+	yjcE	b4065	0.76	-0.5
4,279,260	+	yjcE	b4065	0.76	-0.1
4,279,293	-	yjcE	b4065	0.78	+0.0
4,279,308	+	yjcE	b4065	0.79	-0.6
4,279,377	-	yjcE	b4065	0.83	+0.4
4,279,377	-	yjcE	b4065	0.83	-0.4
4,279,498	+				-0.7
4,279,500	+				+0.7
4,279,524	+				-1.6
4,279,566	+				+0.6
4,279,566	+				+0.2
4,279,582	+				-0.3
4,279,609	+				+0.3
4,279,619	+				+0.2
4,279,619	+				+1.8
4,279,626	-				+0.2
4,279,668	+				+2.2
4,279,672	+				-1.7
4,279,680	-				+0.1
4,279,683	+				+0.3
4,279,709	-				+2.2
4,279,709	-				+0.5
4,279,717	-				-0.4
4,279,718	+				+1.2
4,279,718	+				+0.6
4,279,718	+				+1.2
4,279,718	+				+1.0
4,279,726	-				+1.4
4,279,726	-				+0.5
4,279,728	+				+0.7
4,279,728	+				-0.6
4,279,728	+				+0.4
4,279,736	-				+0.2
4,279,736	-				-1.0
4,279,736	-				+0.3
4,279,741	-				+0.9
4,279,741	-				+0.9
4,279,790	+				-0.3
4,279,799	-				+1.0
4,279,803	+				+0.2
4,279,809	+				+0.5
4,279,811	-				-0.3
4,279,811	-				-0.3
4,279,817	-				-0.5
4,279,826	-				+0.0
4,279,826	-				-1.8
4,279,850	+				+0.7
4,279,859	-				-0.3
4,279,859	-				-0.2
4,279,860	-				-1.5
4,279,861	-				-1.1
4,279,866	-				+0.7
4,279,866	-				+0.9
4,279,866	-				-1.3
4,279,871	+				-1.0
4,279,878	-				-0.3
4,279,881	+				-1.2
4,279,881	+				+1.2
4,279,881	+				-0.3
4,279,884	+				+0.3
4,279,884	+				-0.1
4,279,891	+				-0.8
4,279,891	-				+0.1
4,279,891	-				-1.6
4,279,924	-				+0.8
4,279,924	-				-0.8
4,279,924	-				+0.5
4,279,930	-				+1.2
4,279,931	+				-0.7
4,279,932	-				-0.1
4,279,932	-				-1.3
4,279,939	-	yjcF	b4066	0.10	+0.4
4,279,968	+	yjcF	b4066	0.13	+0.9
4,279,968	+	yjcF	b4066	0.13	+0.2
4,279,979	+	yjcF	b4066	0.13	+1.6
4,280,057	-	yjcF	b4066	0.19	+0.9