Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5138 and PfGW456L13_5139 are separated by 162 nucleotides PfGW456L13_5139 and PfGW456L13_5140 overlap by 11 nucleotides PfGW456L13_5140 and PfGW456L13_5141 are separated by 217 nucleotides
PfGW456L13_5138 - Modulator of drug activity B, at 5,736,679 to 5,737,269
_5138
PfGW456L13_5139 - FIG00959330: hypothetical protein, at 5,737,432 to 5,737,746
_5139
PfGW456L13_5140 - membrane protein, putative, at 5,737,736 to 5,738,500
_5140
PfGW456L13_5141 - Hydrogen peroxide-inducible genes activator, at 5,738,718 to 5,739,602
_5141
Position (kb) 5737
5738
5739 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5736.827 kb on + strand, within PfGW456L13_5138 at 5736.827 kb on + strand, within PfGW456L13_5138 at 5736.828 kb on - strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.947 kb on + strand, within PfGW456L13_5138 at 5736.948 kb on - strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5737.029 kb on - strand, within PfGW456L13_5138 at 5737.029 kb on - strand, within PfGW456L13_5138 at 5737.077 kb on - strand, within PfGW456L13_5138 at 5737.128 kb on - strand, within PfGW456L13_5138 at 5737.211 kb on + strand at 5737.211 kb on + strand at 5737.310 kb on + strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.513 kb on + strand, within PfGW456L13_5139 at 5737.514 kb on - strand, within PfGW456L13_5139 at 5737.514 kb on - strand, within PfGW456L13_5139 at 5737.597 kb on + strand, within PfGW456L13_5139 at 5737.598 kb on - strand, within PfGW456L13_5139 at 5737.681 kb on + strand, within PfGW456L13_5139 at 5737.682 kb on - strand, within PfGW456L13_5139 at 5737.682 kb on - strand, within PfGW456L13_5139 at 5737.914 kb on - strand, within PfGW456L13_5140 at 5738.008 kb on - strand, within PfGW456L13_5140 at 5738.008 kb on - strand, within PfGW456L13_5140 at 5738.143 kb on - strand, within PfGW456L13_5140 at 5738.143 kb on - strand, within PfGW456L13_5140 at 5738.494 kb on + strand at 5738.495 kb on - strand at 5738.495 kb on - strand at 5738.495 kb on - strand at 5738.544 kb on - strand at 5738.544 kb on - strand at 5738.545 kb on + strand at 5738.546 kb on - strand at 5738.546 kb on - strand at 5738.546 kb on - strand at 5738.546 kb on - strand at 5738.546 kb on - strand at 5738.546 kb on - strand at 5738.548 kb on + strand at 5738.549 kb on - strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.629 kb on + strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.630 kb on - strand at 5738.633 kb on + strand at 5738.633 kb on + strand at 5738.633 kb on + strand at 5738.634 kb on - strand at 5738.634 kb on - strand at 5738.634 kb on - strand at 5738.748 kb on + strand at 5738.977 kb on - strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.294 kb on + strand, within PfGW456L13_5141 at 5739.295 kb on - strand, within PfGW456L13_5141 at 5739.295 kb on - strand, within PfGW456L13_5141 at 5739.295 kb on - strand, within PfGW456L13_5141 at 5739.295 kb on - strand, within PfGW456L13_5141 at 5739.330 kb on + strand, within PfGW456L13_5141 at 5739.331 kb on - strand, within PfGW456L13_5141 at 5739.331 kb on - strand, within PfGW456L13_5141 at 5739.331 kb on - strand, within PfGW456L13_5141 at 5739.478 kb on + strand, within PfGW456L13_5141 at 5739.479 kb on - strand, within PfGW456L13_5141 at 5739.479 kb on - strand, within PfGW456L13_5141
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 5,736,827 + PfGW456L13_5138 0.25 -0.1 5,736,827 + PfGW456L13_5138 0.25 +1.1 5,736,828 - PfGW456L13_5138 0.25 -0.9 5,736,914 + PfGW456L13_5138 0.40 -3.9 5,736,914 + PfGW456L13_5138 0.40 -1.9 5,736,914 + PfGW456L13_5138 0.40 -2.9 5,736,914 + PfGW456L13_5138 0.40 -0.5 5,736,914 + PfGW456L13_5138 0.40 +2.2 5,736,914 + PfGW456L13_5138 0.40 +1.1 5,736,914 + PfGW456L13_5138 0.40 +3.3 5,736,914 + PfGW456L13_5138 0.40 +2.5 5,736,914 + PfGW456L13_5138 0.40 +0.7 5,736,914 + PfGW456L13_5138 0.40 -3.2 5,736,914 + PfGW456L13_5138 0.40 +2.4 5,736,914 + PfGW456L13_5138 0.40 +1.4 5,736,914 + PfGW456L13_5138 0.40 -3.1 5,736,914 + PfGW456L13_5138 0.40 -2.9 5,736,914 + PfGW456L13_5138 0.40 +1.1 5,736,914 + PfGW456L13_5138 0.40 +1.0 5,736,914 + PfGW456L13_5138 0.40 +1.2 5,736,914 + PfGW456L13_5138 0.40 +1.5 5,736,914 + PfGW456L13_5138 0.40 +2.7 5,736,914 + PfGW456L13_5138 0.40 -2.6 5,736,914 + PfGW456L13_5138 0.40 +0.3 5,736,914 + PfGW456L13_5138 0.40 +0.8 5,736,915 - PfGW456L13_5138 0.40 +0.4 5,736,915 - PfGW456L13_5138 0.40 -2.5 5,736,915 - PfGW456L13_5138 0.40 +0.0 5,736,915 - PfGW456L13_5138 0.40 +0.8 5,736,915 - PfGW456L13_5138 0.40 -0.6 5,736,915 - PfGW456L13_5138 0.40 -0.5 5,736,915 - PfGW456L13_5138 0.40 -0.6 5,736,915 - PfGW456L13_5138 0.40 +1.7 5,736,915 - PfGW456L13_5138 0.40 +2.0 5,736,915 - PfGW456L13_5138 0.40 +1.1 5,736,915 - PfGW456L13_5138 0.40 -3.2 5,736,915 - PfGW456L13_5138 0.40 -1.1 5,736,915 - PfGW456L13_5138 0.40 +0.1 5,736,915 - PfGW456L13_5138 0.40 -0.7 5,736,915 - PfGW456L13_5138 0.40 +1.1 5,736,915 - PfGW456L13_5138 0.40 -1.9 5,736,915 - PfGW456L13_5138 0.40 +0.7 5,736,915 - PfGW456L13_5138 0.40 -2.7 5,736,915 - PfGW456L13_5138 0.40 -2.8 5,736,915 - PfGW456L13_5138 0.40 -1.5 5,736,947 + PfGW456L13_5138 0.45 +0.5 5,736,948 - PfGW456L13_5138 0.46 +0.9 5,736,989 + PfGW456L13_5138 0.52 -2.7 5,736,989 + PfGW456L13_5138 0.52 +0.2 5,736,989 + PfGW456L13_5138 0.52 -2.7 5,736,990 - PfGW456L13_5138 0.53 +0.2 5,736,990 - PfGW456L13_5138 0.53 -2.1 5,736,990 - PfGW456L13_5138 0.53 -0.4 5,737,029 - PfGW456L13_5138 0.59 +2.0 5,737,029 - PfGW456L13_5138 0.59 +1.1 5,737,077 - PfGW456L13_5138 0.67 +2.9 5,737,128 - PfGW456L13_5138 0.76 +0.3 5,737,211 + -1.0 5,737,211 + -3.2 5,737,310 + +0.7 5,737,333 - +1.4 5,737,333 - +1.6 5,737,333 - +1.8 5,737,333 - +1.9 5,737,429 + -1.4 5,737,429 + -0.4 5,737,429 + -2.3 5,737,429 + -0.0 5,737,429 + -2.6 5,737,429 + +1.5 5,737,429 + +0.6 5,737,429 + +0.0 5,737,429 + +0.1 5,737,429 + +1.4 5,737,429 + -1.5 5,737,429 + -1.4 5,737,429 + +1.8 5,737,429 + -1.0 5,737,429 + -4.6 5,737,429 + +0.4 5,737,429 + +1.8 5,737,429 + -0.1 5,737,429 + +1.1 5,737,429 + +1.8 5,737,430 - -1.1 5,737,430 - +0.5 5,737,430 - +0.7 5,737,430 - -3.5 5,737,430 - +0.6 5,737,430 - -3.1 5,737,430 - -2.9 5,737,430 - +0.5 5,737,430 - +0.1 5,737,430 - -0.0 5,737,430 - +0.9 5,737,513 + PfGW456L13_5139 0.26 -3.2 5,737,514 - PfGW456L13_5139 0.26 -0.6 5,737,514 - PfGW456L13_5139 0.26 -2.6 5,737,597 + PfGW456L13_5139 0.52 -3.5 5,737,598 - PfGW456L13_5139 0.53 +2.8 5,737,681 + PfGW456L13_5139 0.79 +0.8 5,737,682 - PfGW456L13_5139 0.79 +1.1 5,737,682 - PfGW456L13_5139 0.79 -0.1 5,737,914 - PfGW456L13_5140 0.23 -2.8 5,738,008 - PfGW456L13_5140 0.36 +0.8 5,738,008 - PfGW456L13_5140 0.36 -0.6 5,738,143 - PfGW456L13_5140 0.53 +1.0 5,738,143 - PfGW456L13_5140 0.53 -1.6 5,738,494 + +2.6 5,738,495 - -2.4 5,738,495 - -0.4 5,738,495 - +0.1 5,738,544 - +1.9 5,738,544 - +2.5 5,738,545 + -2.3 5,738,546 - -1.8 5,738,546 - +1.3 5,738,546 - +1.1 5,738,546 - -1.5 5,738,546 - +0.3 5,738,546 - +0.1 5,738,548 + +1.5 5,738,549 - -0.4 5,738,629 + +0.5 5,738,629 + +1.1 5,738,629 + +0.9 5,738,629 + +1.6 5,738,629 + -1.2 5,738,629 + -1.5 5,738,629 + +1.4 5,738,629 + -0.5 5,738,629 + +1.8 5,738,629 + -0.1 5,738,629 + +2.3 5,738,629 + -3.2 5,738,629 + +0.6 5,738,629 + -0.1 5,738,629 + +1.4 5,738,630 - -3.0 5,738,630 - +0.9 5,738,630 - -4.3 5,738,630 - +0.9 5,738,630 - -0.9 5,738,630 - +0.4 5,738,630 - +0.2 5,738,630 - -2.4 5,738,630 - +0.4 5,738,630 - +1.1 5,738,630 - -3.3 5,738,630 - -2.4 5,738,630 - +0.1 5,738,630 - -3.4 5,738,630 - -0.2 5,738,633 + -0.1 5,738,633 + +0.1 5,738,633 + +0.2 5,738,634 - -4.4 5,738,634 - -3.6 5,738,634 - -3.6 5,738,748 + -1.0 5,738,977 - PfGW456L13_5141 0.29 +2.0 5,739,294 + PfGW456L13_5141 0.65 +1.3 5,739,294 + PfGW456L13_5141 0.65 +0.4 5,739,294 + PfGW456L13_5141 0.65 -3.6 5,739,294 + PfGW456L13_5141 0.65 -3.0 5,739,294 + PfGW456L13_5141 0.65 -2.5 5,739,294 + PfGW456L13_5141 0.65 +1.3 5,739,294 + PfGW456L13_5141 0.65 +0.2 5,739,295 - PfGW456L13_5141 0.65 -0.6 5,739,295 - PfGW456L13_5141 0.65 +0.5 5,739,295 - PfGW456L13_5141 0.65 +0.9 5,739,295 - PfGW456L13_5141 0.65 +0.9 5,739,330 + PfGW456L13_5141 0.69 +0.1 5,739,331 - PfGW456L13_5141 0.69 +0.0 5,739,331 - PfGW456L13_5141 0.69 -0.1 5,739,331 - PfGW456L13_5141 0.69 +0.9 5,739,478 + PfGW456L13_5141 0.86 -2.2 5,739,479 - PfGW456L13_5141 0.86 +0.1 5,739,479 - PfGW456L13_5141 0.86 -2.5
Or see this region's nucleotide sequence