Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_512 and PfGW456L13_513 are separated by 2 nucleotides PfGW456L13_513 and PfGW456L13_514 are separated by 12 nucleotides PfGW456L13_514 and PfGW456L13_515 overlap by 17 nucleotides
PfGW456L13_512 - Putative membrane-bound ClpP-class protease associated with aq_911, at 585,313 to 585,774
_512
PfGW456L13_513 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 585,777 to 586,535
_513
PfGW456L13_514 - Adenylylsulfate kinase (EC 2.7.1.25), at 586,548 to 587,153
_514
PfGW456L13_515 - Outer membrane protein assembly factor YaeT precursor, at 587,137 to 588,651
_515
Position (kb) 586
587
588 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 585.772 kb on + strand at 585.772 kb on + strand at 585.772 kb on + strand at 585.773 kb on - strand at 585.773 kb on - strand at 585.773 kb on - strand at 585.808 kb on + strand at 585.808 kb on + strand at 585.808 kb on + strand at 585.809 kb on - strand at 586.041 kb on + strand, within PfGW456L13_513 at 586.041 kb on + strand, within PfGW456L13_513 at 586.428 kb on + strand, within PfGW456L13_513 at 586.429 kb on - strand, within PfGW456L13_513 at 586.429 kb on - strand, within PfGW456L13_513 at 586.664 kb on - strand, within PfGW456L13_514 at 586.717 kb on + strand, within PfGW456L13_514 at 586.718 kb on - strand, within PfGW456L13_514 at 587.065 kb on - strand, within PfGW456L13_514 at 587.065 kb on - strand, within PfGW456L13_514 at 587.169 kb on + strand at 587.170 kb on - strand at 587.170 kb on - strand at 587.172 kb on + strand at 587.173 kb on - strand at 587.173 kb on - strand at 587.173 kb on - strand at 587.292 kb on - strand, within PfGW456L13_515 at 587.292 kb on - strand, within PfGW456L13_515 at 587.312 kb on + strand, within PfGW456L13_515 at 587.312 kb on + strand, within PfGW456L13_515 at 587.346 kb on + strand, within PfGW456L13_515 at 587.346 kb on + strand, within PfGW456L13_515 at 587.346 kb on + strand, within PfGW456L13_515 at 587.347 kb on - strand, within PfGW456L13_515 at 587.347 kb on - strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.498 kb on + strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.499 kb on - strand, within PfGW456L13_515 at 587.672 kb on + strand, within PfGW456L13_515 at 587.673 kb on - strand, within PfGW456L13_515 at 587.756 kb on + strand, within PfGW456L13_515 at 587.757 kb on - strand, within PfGW456L13_515 at 587.840 kb on + strand, within PfGW456L13_515 at 588.118 kb on + strand, within PfGW456L13_515 at 588.118 kb on + strand, within PfGW456L13_515 at 588.118 kb on + strand, within PfGW456L13_515 at 588.118 kb on + strand, within PfGW456L13_515 at 588.118 kb on + strand, within PfGW456L13_515 at 588.119 kb on - strand, within PfGW456L13_515 at 588.119 kb on - strand, within PfGW456L13_515 at 588.119 kb on - strand, within PfGW456L13_515 at 588.119 kb on - strand, within PfGW456L13_515 at 588.119 kb on - strand, within PfGW456L13_515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 585,772 + +1.3 585,772 + -1.4 585,772 + +0.9 585,773 - -1.7 585,773 - +1.2 585,773 - -0.6 585,808 + -1.8 585,808 + +0.7 585,808 + +1.3 585,809 - +0.4 586,041 + PfGW456L13_513 0.35 -2.9 586,041 + PfGW456L13_513 0.35 +0.1 586,428 + PfGW456L13_513 0.86 +1.1 586,429 - PfGW456L13_513 0.86 -0.4 586,429 - PfGW456L13_513 0.86 +0.3 586,664 - PfGW456L13_514 0.19 +0.8 586,717 + PfGW456L13_514 0.28 +1.5 586,718 - PfGW456L13_514 0.28 +1.8 587,065 - PfGW456L13_514 0.85 +1.7 587,065 - PfGW456L13_514 0.85 +1.3 587,169 + -1.7 587,170 - -3.8 587,170 - +1.2 587,172 + +1.3 587,173 - +0.6 587,173 - -0.8 587,173 - -0.2 587,292 - PfGW456L13_515 0.10 -2.3 587,292 - PfGW456L13_515 0.10 -3.1 587,312 + PfGW456L13_515 0.12 -0.5 587,312 + PfGW456L13_515 0.12 -1.7 587,346 + PfGW456L13_515 0.14 +1.1 587,346 + PfGW456L13_515 0.14 +1.0 587,346 + PfGW456L13_515 0.14 -1.3 587,347 - PfGW456L13_515 0.14 +0.9 587,347 - PfGW456L13_515 0.14 +0.4 587,498 + PfGW456L13_515 0.24 -0.9 587,498 + PfGW456L13_515 0.24 +0.9 587,498 + PfGW456L13_515 0.24 +1.5 587,498 + PfGW456L13_515 0.24 +1.1 587,498 + PfGW456L13_515 0.24 -3.2 587,498 + PfGW456L13_515 0.24 +0.4 587,498 + PfGW456L13_515 0.24 +1.4 587,498 + PfGW456L13_515 0.24 +1.0 587,498 + PfGW456L13_515 0.24 +0.9 587,498 + PfGW456L13_515 0.24 +1.2 587,498 + PfGW456L13_515 0.24 -0.4 587,498 + PfGW456L13_515 0.24 +1.7 587,498 + PfGW456L13_515 0.24 +0.3 587,498 + PfGW456L13_515 0.24 -2.1 587,498 + PfGW456L13_515 0.24 +0.8 587,498 + PfGW456L13_515 0.24 +3.5 587,498 + PfGW456L13_515 0.24 -0.6 587,499 - PfGW456L13_515 0.24 -2.4 587,499 - PfGW456L13_515 0.24 -1.2 587,499 - PfGW456L13_515 0.24 +0.3 587,499 - PfGW456L13_515 0.24 -0.5 587,499 - PfGW456L13_515 0.24 -3.2 587,499 - PfGW456L13_515 0.24 +1.2 587,499 - PfGW456L13_515 0.24 -2.9 587,499 - PfGW456L13_515 0.24 -1.5 587,499 - PfGW456L13_515 0.24 -1.9 587,499 - PfGW456L13_515 0.24 -0.3 587,499 - PfGW456L13_515 0.24 +1.0 587,499 - PfGW456L13_515 0.24 +1.0 587,499 - PfGW456L13_515 0.24 +1.5 587,499 - PfGW456L13_515 0.24 +1.2 587,499 - PfGW456L13_515 0.24 +1.6 587,499 - PfGW456L13_515 0.24 -1.2 587,499 - PfGW456L13_515 0.24 +0.0 587,499 - PfGW456L13_515 0.24 -0.3 587,499 - PfGW456L13_515 0.24 +1.6 587,499 - PfGW456L13_515 0.24 -2.0 587,499 - PfGW456L13_515 0.24 +0.1 587,499 - PfGW456L13_515 0.24 -1.8 587,499 - PfGW456L13_515 0.24 +1.3 587,672 + PfGW456L13_515 0.35 -0.5 587,673 - PfGW456L13_515 0.35 +0.8 587,756 + PfGW456L13_515 0.41 -1.7 587,757 - PfGW456L13_515 0.41 +1.5 587,840 + PfGW456L13_515 0.46 +1.2 588,118 + PfGW456L13_515 0.65 -2.3 588,118 + PfGW456L13_515 0.65 -1.9 588,118 + PfGW456L13_515 0.65 -4.0 588,118 + PfGW456L13_515 0.65 -3.4 588,118 + PfGW456L13_515 0.65 -0.7 588,119 - PfGW456L13_515 0.65 +0.4 588,119 - PfGW456L13_515 0.65 -0.7 588,119 - PfGW456L13_515 0.65 -0.3 588,119 - PfGW456L13_515 0.65 -2.2 588,119 - PfGW456L13_515 0.65 -3.9
Or see this region's nucleotide sequence