Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3343

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
3,754,846	+		PfGW456L13_3342	0.47	+1.2
3,754,846	+		PfGW456L13_3342	0.47	-0.3
3,754,846	+		PfGW456L13_3342	0.47	+3.3
3,754,846	+		PfGW456L13_3342	0.47	-1.9
3,754,846	+		PfGW456L13_3342	0.47	+1.9
3,754,846	+		PfGW456L13_3342	0.47	+0.3
3,754,846	+		PfGW456L13_3342	0.47	-1.2
3,754,846	+		PfGW456L13_3342	0.47	+1.1
3,754,846	+		PfGW456L13_3342	0.47	-3.3
3,754,846	+		PfGW456L13_3342	0.47	+1.7
3,754,846	+		PfGW456L13_3342	0.47	-0.9
3,754,846	+		PfGW456L13_3342	0.47	-0.9
3,754,846	+		PfGW456L13_3342	0.47	-3.7
3,754,846	+		PfGW456L13_3342	0.47	+1.6
3,754,846	+		PfGW456L13_3342	0.47	-0.3
3,754,846	+		PfGW456L13_3342	0.47	-2.3
3,754,846	+		PfGW456L13_3342	0.47	-0.9
3,754,846	+		PfGW456L13_3342	0.47	-4.2
3,754,846	+		PfGW456L13_3342	0.47	+1.6
3,754,846	+		PfGW456L13_3342	0.47	-0.4
3,754,846	+		PfGW456L13_3342	0.47	+1.9
3,754,846	+		PfGW456L13_3342	0.47	+0.4
3,754,847	-		PfGW456L13_3342	0.47	+1.3
3,754,847	-		PfGW456L13_3342	0.47	+1.5
3,754,847	-		PfGW456L13_3342	0.47	-0.3
3,754,847	-		PfGW456L13_3342	0.47	-0.0
3,754,847	-		PfGW456L13_3342	0.47	+1.2
3,754,847	-		PfGW456L13_3342	0.47	-0.8
3,754,847	-		PfGW456L13_3342	0.47	-0.7
3,754,847	-				+1.3
3,754,847	-		PfGW456L13_3342	0.47	-1.1
3,754,847	-		PfGW456L13_3342	0.47	+0.4
3,754,847	-		PfGW456L13_3342	0.47	+0.5
3,754,847	-		PfGW456L13_3342	0.47	-1.0
3,754,847	-		PfGW456L13_3342	0.47	+0.4
3,754,847	-		PfGW456L13_3342	0.47	+1.8
3,754,847	-		PfGW456L13_3342	0.47	-2.6
3,754,847	-		PfGW456L13_3342	0.47	+0.8
3,754,847	-		PfGW456L13_3342	0.47	+0.9
3,754,847	-		PfGW456L13_3342	0.47	+2.0
3,754,847	-		PfGW456L13_3342	0.47	-3.3
3,754,847	-		PfGW456L13_3342	0.47	-2.4
3,754,847	-		PfGW456L13_3342	0.47	+1.8
3,754,847	-		PfGW456L13_3342	0.47	+1.5
3,754,847	-		PfGW456L13_3342	0.47	+0.3
3,754,847	-				-0.7
3,754,847	-		PfGW456L13_3342	0.47	+0.9
3,754,847	-		PfGW456L13_3342	0.47	+1.3
3,754,847	-		PfGW456L13_3342	0.47	+0.1
3,754,847	-		PfGW456L13_3342	0.47	+0.6
3,754,847	-		PfGW456L13_3342	0.47	-0.3
3,754,847	-		PfGW456L13_3342	0.47	-1.8
3,754,847	-		PfGW456L13_3342	0.47	-0.8
3,754,847	-		PfGW456L13_3342	0.47	+0.7
3,754,849	-		PfGW456L13_3342	0.47	-1.9
3,755,086	+		PfGW456L13_3342	0.60	-1.4
3,755,086	+		PfGW456L13_3342	0.60	+0.4
3,755,086	+		PfGW456L13_3342	0.60	+0.7
3,755,086	+		PfGW456L13_3342	0.60	-3.4
3,755,086	+		PfGW456L13_3342	0.60	+0.5
3,755,086	+		PfGW456L13_3342	0.60	-0.6
3,755,086	+		PfGW456L13_3342	0.60	-1.4
3,755,086	+		PfGW456L13_3342	0.60	+1.7
3,755,086	+		PfGW456L13_3342	0.60	+0.2
3,755,087	-		PfGW456L13_3342	0.60	+0.6
3,755,087	-		PfGW456L13_3342	0.60	+1.0
3,755,087	-		PfGW456L13_3342	0.60	-0.4
3,755,087	-		PfGW456L13_3342	0.60	-0.4
3,755,087	-		PfGW456L13_3342	0.60	-0.7
3,755,087	-		PfGW456L13_3342	0.60	+0.6
3,755,090	-		PfGW456L13_3342	0.60	+0.6
3,755,155	+		PfGW456L13_3342	0.64	-0.4
3,755,156	-		PfGW456L13_3342	0.64	-1.4
3,755,185	-		PfGW456L13_3342	0.65	-2.1
3,755,374	+		PfGW456L13_3342	0.76	+0.7
3,755,374	+		PfGW456L13_3342	0.76	-2.3
3,755,374	+		PfGW456L13_3342	0.76	-2.6
3,755,374	+		PfGW456L13_3342	0.76	-0.3
3,755,374	+		PfGW456L13_3342	0.76	+0.9
3,755,374	+		PfGW456L13_3342	0.76	-2.3
3,755,375	-		PfGW456L13_3342	0.76	-1.4
3,755,375	-		PfGW456L13_3342	0.76	-3.9
3,755,375	-		PfGW456L13_3342	0.76	+1.3
3,755,437	+		PfGW456L13_3342	0.79	-3.3
3,755,438	-		PfGW456L13_3342	0.79	-0.3
3,755,438	-		PfGW456L13_3342	0.79	+1.4
3,755,438	-		PfGW456L13_3342	0.79	-2.3
3,755,438	-		PfGW456L13_3342	0.79	+0.1
3,755,438	-		PfGW456L13_3342	0.79	+0.2
3,755,438	-		PfGW456L13_3342	0.79	+2.2
3,755,524	+		PfGW456L13_3342	0.84	+0.4
3,755,524	+		PfGW456L13_3342	0.84	+1.1
3,755,524	+		PfGW456L13_3342	0.84	+1.0
3,755,567	-		PfGW456L13_3342	0.86	-0.1
3,755,686	+				+1.2
3,755,686	+				-2.4
3,755,686	+				-3.1
3,755,686	+				-0.4
3,755,686	+				+0.5
3,755,687	-				+0.9
3,755,687	-				-1.8
3,755,687	-				+0.2
3,755,705	-				-2.1
3,755,713	+				-0.4
3,755,764	+				-3.1
3,755,764	+				+0.9
3,755,905	-				-3.5
3,755,905	-				+1.6
3,755,905	-				-2.5
3,755,905	-				+2.3
3,755,906	+				+0.5
3,755,906	+				-0.4
3,755,949	+				-1.3
3,755,950	-				+2.2
3,756,066	+		PfGW456L13_3343	0.14	-2.3
3,756,066	+		PfGW456L13_3343	0.14	-1.3
3,756,067	-		PfGW456L13_3343	0.14	+1.5
3,756,067	-		PfGW456L13_3343	0.14	-0.1
3,756,067	-		PfGW456L13_3343	0.14	+0.2
3,756,067	-		PfGW456L13_3343	0.14	-2.1
3,756,168	+		PfGW456L13_3343	0.19	-1.3
3,756,267	+		PfGW456L13_3343	0.25	-2.7
3,756,268	-		PfGW456L13_3343	0.25	+0.1
3,756,279	+		PfGW456L13_3343	0.25	-1.1
3,756,280	-		PfGW456L13_3343	0.25	-1.9
3,756,459	+		PfGW456L13_3343	0.35	+1.6
3,756,459	+		PfGW456L13_3343	0.35	+1.6
3,756,459	+		PfGW456L13_3343	0.35	-2.1
3,756,579	+		PfGW456L13_3343	0.42	+0.6
3,756,580	-		PfGW456L13_3343	0.42	+0.5
3,756,580	-		PfGW456L13_3343	0.42	+1.2
3,756,634	-		PfGW456L13_3343	0.45	+0.5
3,756,672	+		PfGW456L13_3343	0.47	+1.7
3,756,673	-		PfGW456L13_3343	0.47	-1.4
3,756,673	-		PfGW456L13_3343	0.47	+1.8
3,756,754	+		PfGW456L13_3343	0.51	+0.1
3,756,754	+		PfGW456L13_3343	0.51	+0.3
3,756,754	+		PfGW456L13_3343	0.51	+0.3
3,756,876	+		PfGW456L13_3343	0.58	+0.8
3,757,042	-		PfGW456L13_3343	0.67	+0.0
3,757,042	-		PfGW456L13_3343	0.67	+2.0
3,757,227	+		PfGW456L13_3343	0.77	-1.1
3,757,228	-		PfGW456L13_3343	0.77	+0.1
3,757,228	-		PfGW456L13_3343	0.77	-1.1
3,757,228	-		PfGW456L13_3343	0.77	+1.9
3,757,228	-		PfGW456L13_3343	0.77	+0.8
3,757,473	+				+0.8
3,757,476	+				-2.7
3,757,476	+				+1.8
3,757,476	+				-2.3
3,757,476	+				-0.2
3,757,476	+				-0.1
3,757,476	+				-4.5
3,757,477	-				+0.5
3,757,477	-				+0.4
3,757,477	-				+1.3
3,757,477	-				+0.5
3,757,477	-				+0.2
3,757,477	-				-0.2
3,757,477	-				-0.6
3,757,477	-				+2.2
3,757,477	-				+2.6
3,757,477	-				+0.3
3,757,480	+				+0.3
3,757,480	+				-2.6
3,757,480	+				-2.6
3,757,480	+				+1.8
3,757,481	-				-2.3
3,757,481	-				-3.2
3,757,481	-				-2.9
3,757,481	-				+0.6
3,757,481	-				+0.2
3,757,481	-				-1.1
3,757,481	-				+0.9
3,757,484	-				+1.6
3,757,518	+				+0.7
3,757,518	+				+0.8
3,757,554	-				+1.0
3,757,557	+				+2.4
3,757,557	+				+0.2
3,757,557	+				+0.8
3,757,558	-				+2.1
3,757,558	-				-0.3
3,757,558	-				-0.5
3,757,609	+				-1.7
3,757,609	+				+1.4
3,757,609	+				-0.0
3,757,609	+				+0.7
3,757,610	-				-2.3
3,757,610	-				-1.4
3,757,610	-				-0.1
3,757,654	-				+0.3
3,757,654	-				-0.6
3,757,909	+		PfGW456L13_3344	0.23	+0.5
3,757,909	+		PfGW456L13_3344	0.23	+0.1
3,757,909	+		PfGW456L13_3344	0.23	-3.4
3,757,910	-		PfGW456L13_3344	0.23	-0.9
3,757,910	-		PfGW456L13_3344	0.23	+0.8
3,757,910	-		PfGW456L13_3344	0.23	-2.6
3,757,910	-		PfGW456L13_3344	0.23	+0.3
3,757,910	-		PfGW456L13_3344	0.23	+0.6
3,757,960	+		PfGW456L13_3344	0.28	+1.6
3,757,960	+		PfGW456L13_3344	0.28	-2.7
3,757,960	+		PfGW456L13_3344	0.28	-0.6
3,757,960	+		PfGW456L13_3344	0.28	+1.1
3,757,960	+		PfGW456L13_3344	0.28	-3.2
3,757,960	+		PfGW456L13_3344	0.28	+0.1
3,757,960	+		PfGW456L13_3344	0.28	-1.1
3,757,960	+		PfGW456L13_3344	0.28	+2.7
3,757,960	+		PfGW456L13_3344	0.28	+1.5
3,757,961	-				-0.1
3,757,961	-		PfGW456L13_3344	0.28	+1.6
3,757,961	-		PfGW456L13_3344	0.28	+2.0
3,757,961	-		PfGW456L13_3344	0.28	+2.1
3,757,961	-		PfGW456L13_3344	0.28	+0.2
3,757,961	-		PfGW456L13_3344	0.28	+0.5
3,757,961	-		PfGW456L13_3344	0.28	+0.3
3,758,074	+		PfGW456L13_3344	0.39	+1.3
3,758,074	+		PfGW456L13_3344	0.39	-3.0
3,758,075	-		PfGW456L13_3344	0.39	-2.9
3,758,075	-		PfGW456L13_3344	0.39	-0.4
3,758,075	-		PfGW456L13_3344	0.39	-1.1
3,758,224	+		PfGW456L13_3344	0.53	-1.8
3,758,224	+		PfGW456L13_3344	0.53	-0.1
3,758,225	-		PfGW456L13_3344	0.53	-3.7
3,758,302	+		PfGW456L13_3344	0.60	-1.5
3,758,303	-		PfGW456L13_3344	0.60	-0.7
3,758,303	-		PfGW456L13_3344	0.60	+1.7
3,758,303	-		PfGW456L13_3344	0.60	+0.6
3,758,303	-		PfGW456L13_3344	0.60	+1.2
3,758,407	+		PfGW456L13_3344	0.70	+0.4
3,758,407	+		PfGW456L13_3344	0.70	+1.1
3,758,407	+		PfGW456L13_3344	0.70	+0.2
3,758,407	+		PfGW456L13_3344	0.70	+0.3
3,758,407	+		PfGW456L13_3344	0.70	+1.4
3,758,408	-		PfGW456L13_3344	0.70	-1.4
3,758,408	-		PfGW456L13_3344	0.70	+2.1
3,758,408	-		PfGW456L13_3344	0.70	+1.6
3,758,408	-		PfGW456L13_3344	0.70	+2.5
3,758,408	-		PfGW456L13_3344	0.70	+1.3
3,758,408	-		PfGW456L13_3344	0.70	-0.7
3,758,456	-		PfGW456L13_3344	0.74	+1.2