Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1841

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
2,029,271	-		PfGW456L13_1839	0.74	+0.8
2,029,271	-		PfGW456L13_1839	0.74	-2.1
2,029,271	-		PfGW456L13_1839	0.74	-2.0
2,029,339	+		PfGW456L13_1839	0.81	-3.7
2,029,339	+		PfGW456L13_1839	0.81	+0.9
2,029,339	+		PfGW456L13_1839	0.81	-0.1
2,029,340	-		PfGW456L13_1839	0.81	+1.5
2,029,340	-		PfGW456L13_1839	0.81	-1.8
2,029,340	-		PfGW456L13_1839	0.81	-0.8
2,029,391	-		PfGW456L13_1839	0.87	-0.8
2,029,391	-		PfGW456L13_1839	0.87	+0.4
2,029,391	-		PfGW456L13_1839	0.87	+2.2
2,029,391	-		PfGW456L13_1839	0.87	+0.4
2,029,391	-		PfGW456L13_1839	0.87	+0.5
2,029,464	+				-1.5
2,029,465	-				+1.9
2,029,491	+				+0.4
2,029,491	+				+1.9
2,029,492	-				-3.5
2,029,492	-				-3.6
2,029,492	-				-2.2
2,029,492	-				+0.4
2,029,492	-				-2.8
2,029,576	-				-1.3
2,029,576	-				-1.2
2,029,577	+				-0.1
2,029,577	+				-2.8
2,029,577	+				+0.2
2,029,577	+				-2.9
2,029,577	+				+2.1
2,029,578	-				+0.7
2,029,578	-				+0.2
2,029,578	-				-1.0
2,029,578	-				+0.1
2,029,629	+				+0.9
2,029,629	+				-3.4
2,029,629	+				-2.8
2,029,629	+				-1.3
2,029,629	+				-2.0
2,029,630	-				-0.2
2,029,631	+				+0.0
2,029,631	+				+2.2
2,029,631	+				-0.5
2,029,632	-				+0.1
2,029,632	-				+0.1
2,029,632	-				-2.7
2,029,632	-				+0.8
2,029,644	+				-3.5
2,029,644	+				-2.5
2,029,644	+				-2.8
2,029,644	+				-0.3
2,029,644	+				+2.9
2,029,644	+				-2.1
2,029,645	-				-2.2
2,029,645	-				-3.5
2,029,645	-				-2.5
2,029,645	-				-1.3
2,029,645	-				+0.3
2,029,645	-				-0.4
2,030,267	+				+1.0
2,030,267	+				+2.3
2,030,267	+				+0.4
2,030,267	+				+0.8
2,030,267	+				-2.2
2,030,267	+				-0.6
2,030,267	+				-0.2
2,030,268	-				+2.2
2,030,268	-				+0.8
2,030,268	-				-1.5
2,030,268	-				-2.0
2,030,268	-				-2.4
2,030,268	-				+0.1
2,030,268	-				+0.1
2,030,268	-				-0.1
2,030,277	+				+1.9
2,030,277	+				+0.5
2,030,277	+				-2.8
2,030,277	+				-0.4
2,030,277	+				-2.0
2,030,278	-				-0.3
2,030,278	-				+0.6
2,030,278	-				+0.3
2,030,278	-				+0.8
2,030,278	-				+1.3
2,030,289	+				-3.0
2,030,340	-				-2.5
2,030,352	+				+0.5
2,030,352	+				-2.6
2,030,353	-				-2.4
2,030,433	+		PfGW456L13_1841	0.19	-0.3
2,030,433	+		PfGW456L13_1841	0.19	+1.4
2,030,433	+		PfGW456L13_1841	0.19	-3.3
2,030,434	-		PfGW456L13_1841	0.19	+0.7
2,030,434	-		PfGW456L13_1841	0.19	+1.3
2,030,434	-		PfGW456L13_1841	0.19	-0.2
2,030,434	-		PfGW456L13_1841	0.19	-3.0
2,030,437	+		PfGW456L13_1841	0.20	-2.2
2,030,437	+		PfGW456L13_1841	0.20	-1.7
2,030,438	-		PfGW456L13_1841	0.20	+0.1
2,030,438	-		PfGW456L13_1841	0.20	+1.0
2,030,438	-		PfGW456L13_1841	0.20	-2.5
2,030,721	+		PfGW456L13_1841	0.53	+0.5
2,030,721	+		PfGW456L13_1841	0.53	-3.9
2,030,722	-		PfGW456L13_1841	0.54	+1.0
2,030,728	+		PfGW456L13_1841	0.54	-1.9
2,030,728	+		PfGW456L13_1841	0.54	+0.3
2,030,788	+		PfGW456L13_1841	0.61	+0.8
2,030,813	-		PfGW456L13_1841	0.64	+2.1
2,030,813	-		PfGW456L13_1841	0.64	-1.6
2,030,829	+		PfGW456L13_1841	0.66	+0.1
2,030,830	-		PfGW456L13_1841	0.66	+0.8
2,030,841	-		PfGW456L13_1841	0.68	-2.6
2,030,874	+		PfGW456L13_1841	0.72	-3.5
2,030,874	+		PfGW456L13_1841	0.72	-3.6
2,030,901	+		PfGW456L13_1841	0.75	-1.6
2,030,902	-		PfGW456L13_1841	0.75	+0.5
2,030,902	-		PfGW456L13_1841	0.75	-1.5
2,030,935	+		PfGW456L13_1841	0.79	+0.1
2,030,979	+		PfGW456L13_1841	0.84	-2.6
2,030,980	-		PfGW456L13_1841	0.84	-1.5
2,030,994	-		PfGW456L13_1841	0.86	-1.3
2,031,024	+		PfGW456L13_1841	0.89	-3.7
2,031,058	+				+3.2
2,031,059	-				+1.0
2,031,174	-				-1.6
2,031,244	-				+0.4
2,031,244	-				-3.2
2,031,244	-				+1.0
2,031,352	-				-2.8
2,031,392	+		PfGW456L13_1842	0.10	-2.6
2,031,392	+		PfGW456L13_1842	0.10	-0.2
2,031,392	+		PfGW456L13_1842	0.10	-1.8
2,031,392	+		PfGW456L13_1842	0.10	+1.5
2,031,392	+		PfGW456L13_1842	0.10	-2.1
2,031,392	+		PfGW456L13_1842	0.10	-1.2
2,031,392	+		PfGW456L13_1842	0.10	-2.8
2,031,393	-		PfGW456L13_1842	0.10	-2.3
2,031,393	-		PfGW456L13_1842	0.10	-0.6
2,031,393	-		PfGW456L13_1842	0.10	-3.0
2,031,393	-		PfGW456L13_1842	0.10	-2.1
2,031,437	+		PfGW456L13_1842	0.13	-3.9
2,031,437	+		PfGW456L13_1842	0.13	-1.0
2,031,449	+		PfGW456L13_1842	0.14	-0.6
2,031,449	+		PfGW456L13_1842	0.14	-1.5
2,031,450	-		PfGW456L13_1842	0.14	-0.2
2,031,501	-		PfGW456L13_1842	0.18	-3.3
2,031,534	-		PfGW456L13_1842	0.21	-2.1
2,031,534	-		PfGW456L13_1842	0.21	+0.8
2,031,663	-		PfGW456L13_1842	0.30	-0.5
2,031,663	-		PfGW456L13_1842	0.30	-0.6
2,031,765	+		PfGW456L13_1842	0.38	-2.1
2,031,803	+		PfGW456L13_1842	0.41	-2.8
2,031,803	+		PfGW456L13_1842	0.41	-1.2
2,031,803	+		PfGW456L13_1842	0.41	-1.6
2,031,803	+		PfGW456L13_1842	0.41	-3.2
2,031,803	+		PfGW456L13_1842	0.41	-2.1
2,031,803	+		PfGW456L13_1842	0.41	-4.0
2,031,803	+		PfGW456L13_1842	0.41	-1.0
2,031,804	-		PfGW456L13_1842	0.41	-2.0
2,031,804	-		PfGW456L13_1842	0.41	-1.6
2,031,804	-		PfGW456L13_1842	0.41	-3.8
2,031,804	-		PfGW456L13_1842	0.41	-3.9
2,031,804	-		PfGW456L13_1842	0.41	+0.5
2,031,804	-		PfGW456L13_1842	0.41	+0.6
2,031,804	-		PfGW456L13_1842	0.41	-3.5
2,031,811	-		PfGW456L13_1842	0.41	+0.5
2,031,854	+		PfGW456L13_1842	0.44	-3.5
2,031,854	+		PfGW456L13_1842	0.44	+2.6
2,031,854	+		PfGW456L13_1842	0.44	-2.5
2,031,854	+		PfGW456L13_1842	0.44	-2.5
2,031,855	-		PfGW456L13_1842	0.44	-2.2
2,031,869	+		PfGW456L13_1842	0.46	-3.7
2,031,870	-		PfGW456L13_1842	0.46	-0.3
2,031,938	+		PfGW456L13_1842	0.51	-1.2
2,031,954	-		PfGW456L13_1842	0.52	-2.0
2,031,984	-		PfGW456L13_1842	0.54	-1.0