Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4204

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
5,026,120	-		Echvi_4203	0.73	+0.1
5,026,142	-		Echvi_4203	0.73	+0.2
5,026,146	+		Echvi_4203	0.73	+0.3
5,026,146	+		Echvi_4203	0.73	-1.5
5,026,146	+		Echvi_4203	0.73	+0.2
5,026,172	+		Echvi_4203	0.74	-0.1
5,026,276	+		Echvi_4203	0.77	+1.7
5,026,306	+		Echvi_4203	0.78	-0.5
5,026,317	+		Echvi_4203	0.78	+0.0
5,026,354	-		Echvi_4203	0.79	-0.6
5,026,389	+		Echvi_4203	0.81	-0.5
5,026,390	-		Echvi_4203	0.81	-1.1
5,026,468	+		Echvi_4203	0.83	+1.1
5,026,474	+		Echvi_4203	0.83	-0.7
5,026,474	+		Echvi_4203	0.83	+0.0
5,026,474	+		Echvi_4203	0.83	-0.4
5,026,474	+		Echvi_4203	0.83	-0.4
5,026,475	-		Echvi_4203	0.83	-0.1
5,026,515	+		Echvi_4203	0.84	-0.6
5,026,516	-		Echvi_4203	0.84	+1.0
5,026,539	+		Echvi_4203	0.85	-0.2
5,026,539	+		Echvi_4203	0.85	+0.6
5,026,540	-		Echvi_4203	0.85	-1.1
5,026,542	-		Echvi_4203	0.85	-0.0
5,026,552	+		Echvi_4203	0.85	-0.1
5,026,552	+		Echvi_4203	0.85	+0.0
5,026,566	+		Echvi_4203	0.86	-1.1
5,026,567	-		Echvi_4203	0.86	-0.2
5,026,585	+		Echvi_4203	0.86	+0.6
5,026,586	-		Echvi_4203	0.86	-0.3
5,026,592	-		Echvi_4203	0.86	+0.5
5,026,592	-		Echvi_4203	0.86	-0.4
5,026,659	+		Echvi_4203	0.88	-0.4
5,026,660	-		Echvi_4203	0.88	-0.3
5,026,719	+				+0.7
5,026,733	+				-0.4
5,026,733	+				+1.8
5,026,733	+				-0.3
5,026,733	+				+0.2
5,026,734	-				+0.5
5,026,734	-				-0.9
5,026,737	+				+0.6
5,026,737	+				-0.1
5,026,737	+				-2.7
5,026,737	+				-0.3
5,026,737	+				+0.2
5,026,737	+				+1.3
5,026,738	-				+0.4
5,026,738	-				+1.2
5,026,738	-				-0.4
5,026,739	+				+0.1
5,026,753	+				-1.1
5,026,754	-				-0.0
5,027,030	-				-2.8
5,027,030	-				+1.0
5,027,044	-				-0.1
5,027,082	+				+1.8
5,027,151	+				-0.2
5,027,151	+				-0.8
5,027,242	-		Echvi_4204	0.11	-0.3
5,027,242	-		Echvi_4204	0.11	-0.3
5,027,244	+		Echvi_4204	0.11	-1.5
5,027,245	-		Echvi_4204	0.11	+0.0
5,027,269	+		Echvi_4204	0.13	+0.8
5,027,276	+		Echvi_4204	0.14	-0.1
5,027,316	+		Echvi_4204	0.17	+1.8
5,027,410	-		Echvi_4204	0.26	-0.1
5,027,431	+		Echvi_4204	0.27	-0.4
5,027,432	-		Echvi_4204	0.27	+1.1
5,027,459	-		Echvi_4204	0.30	-0.2
5,027,469	+		Echvi_4204	0.31	+0.1
5,027,469	+		Echvi_4204	0.31	+2.8
5,027,469	+		Echvi_4204	0.31	+0.1
5,027,469	+		Echvi_4204	0.31	+0.1
5,027,469	+		Echvi_4204	0.31	-0.1
5,027,469	+		Echvi_4204	0.31	+2.0
5,027,470	-		Echvi_4204	0.31	-0.5
5,027,470	-		Echvi_4204	0.31	-1.9
5,027,477	-		Echvi_4204	0.31	-0.3
5,027,477	-		Echvi_4204	0.31	-2.6
5,027,508	+		Echvi_4204	0.34	-0.3
5,027,510	+		Echvi_4204	0.34	+0.1
5,027,510	+		Echvi_4204	0.34	-3.1
5,027,511	-		Echvi_4204	0.34	-1.8
5,027,524	-		Echvi_4204	0.36	-0.9
5,027,532	+		Echvi_4204	0.36	+0.4
5,027,536	+		Echvi_4204	0.37	-0.8
5,027,572	-		Echvi_4204	0.40	-0.4
5,027,660	+		Echvi_4204	0.47	-1.0
5,027,661	-		Echvi_4204	0.48	-0.8
5,027,664	+		Echvi_4204	0.48	+0.1
5,027,665	-		Echvi_4204	0.48	+0.2
5,027,694	+		Echvi_4204	0.50	-0.5
5,027,694	+		Echvi_4204	0.50	-1.2
5,027,694	+		Echvi_4204	0.50	-0.8
5,027,695	-		Echvi_4204	0.51	-2.3
5,027,695	-		Echvi_4204	0.51	-0.5
5,027,772	+		Echvi_4204	0.57	-1.2
5,027,800	-		Echvi_4204	0.60	+2.3
5,027,887	-		Echvi_4204	0.67	-0.3
5,027,907	+		Echvi_4204	0.69	+0.3
5,027,970	+		Echvi_4204	0.75	-0.6
5,027,980	+		Echvi_4204	0.76	+0.1
5,027,981	-		Echvi_4204	0.76	-1.2
5,028,004	+		Echvi_4204	0.78	+0.2
5,028,007	+		Echvi_4204	0.78	+0.6
5,028,023	+		Echvi_4204	0.79	-0.2
5,028,024	-		Echvi_4204	0.79	-0.2
5,028,062	-		Echvi_4204	0.83	-0.5
5,028,080	-		Echvi_4204	0.84	-1.2
5,028,082	+		Echvi_4204	0.84	+1.8
5,028,082	+		Echvi_4204	0.84	+1.0
5,028,083	-		Echvi_4204	0.85	-1.5
5,028,096	+		Echvi_4204	0.86	-1.0
5,028,096	+		Echvi_4204	0.86	-0.4
5,028,131	+		Echvi_4204	0.89	-0.4
5,028,131	+		Echvi_4204	0.89	-0.0
5,028,149	+				+0.1
5,028,150	-				+0.7
5,028,150	-				+0.2
5,028,150	-				+0.7
5,028,152	+				+1.5
5,028,152	+				+1.1
5,028,226	+				+1.1
5,028,262	-				-0.1
5,028,272	-				-0.2
5,028,345	+				+0.3
5,028,410	+				+1.3
5,028,445	+				-0.4
5,028,447	+				+0.9
5,028,447	+				-1.4
5,028,494	+				-0.2
5,028,495	-				+1.0
5,028,541	+				+0.3
5,028,541	+				+1.6
5,028,552	-				+0.3
5,028,554	-				-0.9
5,028,580	+				-0.5
5,028,581	-				-1.9
5,028,605	+				+0.8
5,028,610	-				+0.1
5,028,671	+		Echvi_4205	0.10	+0.8
5,028,671	+		Echvi_4205	0.10	+0.4
5,028,714	-		Echvi_4205	0.18	+1.2
5,028,794	+		Echvi_4205	0.32	-0.0
5,028,794	+		Echvi_4205	0.32	+0.2
5,028,795	-		Echvi_4205	0.32	-0.4
5,028,795	-		Echvi_4205	0.32	+0.0
5,028,795	-		Echvi_4205	0.32	+0.7
5,028,799	-		Echvi_4205	0.33	+0.1
5,028,807	+		Echvi_4205	0.34	-0.1
5,028,807	+		Echvi_4205	0.34	-0.6
5,028,810	+		Echvi_4205	0.35	+0.8
5,028,811	-		Echvi_4205	0.35	-0.3
5,028,855	+		Echvi_4205	0.43	+0.7
5,028,855	+		Echvi_4205	0.43	+0.3
5,028,855	+		Echvi_4205	0.43	+0.4
5,028,856	-		Echvi_4205	0.43	-1.4
5,028,856	-		Echvi_4205	0.43	-0.1
5,028,856	-		Echvi_4205	0.43	+0.8
5,028,876	+		Echvi_4205	0.47	+1.2
5,028,876	+		Echvi_4205	0.47	-0.7
5,028,876	+		Echvi_4205	0.47	-2.3
5,028,876	+		Echvi_4205	0.47	-1.1
5,028,877	-		Echvi_4205	0.47	-0.3
5,028,877	-		Echvi_4205	0.47	+0.0
5,028,877	-		Echvi_4205	0.47	-0.1
5,028,877	-		Echvi_4205	0.47	+1.1
5,028,877	-		Echvi_4205	0.47	+0.1
5,028,878	+		Echvi_4205	0.47	-1.2
5,028,878	+		Echvi_4205	0.47	+1.2
5,028,878	+		Echvi_4205	0.47	-0.7
5,028,878	+		Echvi_4205	0.47	-1.3
5,028,878	+		Echvi_4205	0.47	-0.1
5,028,878	+		Echvi_4205	0.47	-0.0
5,028,879	-		Echvi_4205	0.47	+1.4
5,028,879	-		Echvi_4205	0.47	+0.4
5,028,879	-		Echvi_4205	0.47	-1.2
5,028,879	-		Echvi_4205	0.47	-0.2
5,028,880	+		Echvi_4205	0.47	-0.4
5,028,880	+		Echvi_4205	0.47	+1.4
5,028,881	-		Echvi_4205	0.48	-1.4
5,028,883	-		Echvi_4205	0.48	-0.2
5,028,896	+		Echvi_4205	0.50	-0.2
5,028,897	-		Echvi_4205	0.51	-0.2
5,028,902	-		Echvi_4205	0.51	-1.1
5,028,912	-		Echvi_4205	0.53	-0.5
5,028,953	-		Echvi_4205	0.61	+0.1
5,028,966	+		Echvi_4205	0.63	+0.4
5,028,966	+		Echvi_4205	0.63	+0.6
5,028,966	+		Echvi_4205	0.63	+0.4
5,029,065	-		Echvi_4205	0.81	+0.2
5,029,093	+		Echvi_4205	0.86	-0.6
5,029,094	-		Echvi_4205	0.86	-1.1
5,029,097	+		Echvi_4205	0.86	+1.0
5,029,098	-		Echvi_4205	0.87	+0.4
5,029,098	-		Echvi_4205	0.87	-0.2
5,029,098	-		Echvi_4205	0.87	-0.2
5,029,098	-		Echvi_4205	0.87	-0.5
5,029,098	-		Echvi_4205	0.87	-1.5
5,029,104	+		Echvi_4205	0.88	-0.8
5,029,105	-		Echvi_4205	0.88	-0.6
5,029,108	+		Echvi_4205	0.88	+0.2
5,029,152	-				-0.5
5,029,220	-				+0.9
5,029,248	+				+0.1