Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2142

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,532,180	+		Echvi_2141	0.72	-0.6
2,532,180	+		Echvi_2141	0.72	-0.5
2,532,181	-		Echvi_2141	0.72	-1.1
2,532,181	-		Echvi_2141	0.72	+2.2
2,532,333	-		Echvi_2141	0.76	-1.8
2,532,333	-		Echvi_2141	0.76	-0.6
2,532,338	-		Echvi_2141	0.77	+0.8
2,532,356	+		Echvi_2141	0.77	-0.2
2,532,356	+		Echvi_2141	0.77	+1.8
2,532,356	+		Echvi_2141	0.77	+0.6
2,532,357	-		Echvi_2141	0.77	+0.0
2,532,357	-		Echvi_2141	0.77	+0.2
2,532,399	-		Echvi_2141	0.78	-0.0
2,532,411	+		Echvi_2141	0.79	-0.1
2,532,412	-		Echvi_2141	0.79	+0.2
2,532,412	-		Echvi_2141	0.79	-1.4
2,532,416	-		Echvi_2141	0.79	+0.1
2,532,447	-		Echvi_2141	0.80	-2.0
2,532,459	+		Echvi_2141	0.80	-1.4
2,532,462	+		Echvi_2141	0.80	-0.3
2,532,464	+		Echvi_2141	0.80	+1.0
2,532,464	+		Echvi_2141	0.80	+0.4
2,532,465	-		Echvi_2141	0.80	-0.3
2,532,465	-		Echvi_2141	0.80	+0.2
2,532,500	+		Echvi_2141	0.81	-0.0
2,532,500	+		Echvi_2141	0.81	+0.8
2,532,522	-		Echvi_2141	0.82	+0.8
2,532,608	+		Echvi_2141	0.84	+0.3
2,532,653	-		Echvi_2141	0.86	+0.1
2,532,653	-		Echvi_2141	0.86	-1.4
2,532,656	+		Echvi_2141	0.86	-0.5
2,532,703	-		Echvi_2141	0.87	-0.7
2,532,704	+		Echvi_2141	0.87	+0.2
2,532,743	+		Echvi_2141	0.88	-0.0
2,532,798	-		Echvi_2141	0.90	+1.2
2,532,798	-		Echvi_2141	0.90	-0.5
2,532,808	-				-0.6
2,532,809	+				-1.8
2,532,809	+				-2.0
2,532,809	+				-0.9
2,532,810	-				+0.1
2,532,810	-				+0.8
2,532,843	-				-0.4
2,532,919	-				+0.3
2,532,919	-				-0.5
2,532,937	-				-0.8
2,533,018	+				-0.2
2,533,019	-				+1.8
2,533,020	+				+0.8
2,533,020	+				-0.1
2,533,020	+				+0.5
2,533,020	+				-1.2
2,533,020	+				+0.2
2,533,021	-				-0.9
2,533,021	-				+1.8
2,533,021	-				+0.2
2,533,021	-				+0.8
2,533,090	+				-0.5
2,533,090	+				-0.3
2,533,090	+				-0.9
2,533,090	+				-1.1
2,533,091	-				+0.1
2,533,103	+				-1.0
2,533,104	-				-0.2
2,533,104	-				+2.0
2,533,108	-				+0.3
2,533,108	-				-0.7
2,533,108	-				+0.3
2,533,153	-				-2.0
2,533,186	+				+0.7
2,533,186	+				-0.4
2,533,186	+				-0.4
2,533,187	-				-0.5
2,533,187	-				+1.1
2,533,187	-				+0.5
2,533,188	+				-1.8
2,533,188	+				-0.6
2,533,188	+				+0.5
2,533,188	+				-0.3
2,533,188	+				+0.7
2,533,189	-				-0.2
2,533,189	-				-0.7
2,533,189	-				-0.4
2,533,189	-				-0.8
2,533,192	-				-0.0
2,533,194	+				-0.2
2,533,300	+				-0.9
2,533,310	+				+1.1
2,533,311	-				+0.6
2,533,311	-				-0.1
2,533,326	-				+0.9
2,533,332	+				+0.2
2,533,346	-				-1.3
2,533,346	-				-1.1
2,533,393	+		Echvi_2142	0.13	+1.1
2,533,393	+		Echvi_2142	0.13	+1.8
2,533,396	+		Echvi_2142	0.13	+0.4
2,533,397	-		Echvi_2142	0.13	+1.5
2,533,397	-		Echvi_2142	0.13	-0.0
2,533,399	+		Echvi_2142	0.13	-1.1
2,533,403	-		Echvi_2142	0.13	-0.4
2,533,477	-		Echvi_2142	0.17	-0.4
2,533,490	-		Echvi_2142	0.18	+0.7
2,533,490	-		Echvi_2142	0.18	+0.2
2,533,490	-		Echvi_2142	0.18	-0.6
2,533,490	-		Echvi_2142	0.18	-0.2
2,533,517	-		Echvi_2142	0.20	+0.3
2,533,517	-		Echvi_2142	0.20	-1.0
2,533,517	-		Echvi_2142	0.20	-1.3
2,533,517	-		Echvi_2142	0.20	+0.5
2,533,519	+		Echvi_2142	0.20	+0.2
2,533,519	+		Echvi_2142	0.20	-0.7
2,533,519	+		Echvi_2142	0.20	-1.7
2,533,520	-		Echvi_2142	0.20	+0.2
2,533,559	+		Echvi_2142	0.22	+1.8
2,533,568	-		Echvi_2142	0.22	+0.1
2,533,568	-		Echvi_2142	0.22	+0.4
2,533,575	-		Echvi_2142	0.23	+0.5
2,533,580	+		Echvi_2142	0.23	+0.3
2,533,580	+		Echvi_2142	0.23	-2.1
2,533,580	+		Echvi_2142	0.23	+0.8
2,533,581	-		Echvi_2142	0.23	+1.2
2,533,581	-		Echvi_2142	0.23	-0.9
2,533,581	-		Echvi_2142	0.23	-1.8
2,533,581	-		Echvi_2142	0.23	+0.2
2,533,693	+		Echvi_2142	0.29	+0.2
2,533,694	-		Echvi_2142	0.29	-0.3
2,533,694	-		Echvi_2142	0.29	-1.0
2,533,694	-		Echvi_2142	0.29	-0.3
2,533,769	-		Echvi_2142	0.34	+0.5
2,533,769	-		Echvi_2142	0.34	-0.3
2,533,771	+		Echvi_2142	0.34	-1.0
2,533,771	+		Echvi_2142	0.34	+0.7
2,533,771	+		Echvi_2142	0.34	-0.1
2,533,772	-		Echvi_2142	0.34	+0.6
2,533,772	-		Echvi_2142	0.34	+0.5
2,533,772	-		Echvi_2142	0.34	-0.4
2,533,772	-		Echvi_2142	0.34	+0.6
2,533,779	+		Echvi_2142	0.34	+0.1
2,533,779	+		Echvi_2142	0.34	+0.2
2,533,780	-		Echvi_2142	0.34	+0.6
2,533,780	-		Echvi_2142	0.34	+0.6
2,533,780	-		Echvi_2142	0.34	-2.2
2,533,780	-		Echvi_2142	0.34	-0.1
2,533,780	-		Echvi_2142	0.34	+0.9
2,533,780	-		Echvi_2142	0.34	-0.1
2,533,780	-		Echvi_2142	0.34	+0.0
2,533,780	-		Echvi_2142	0.34	-0.3
2,533,783	-		Echvi_2142	0.34	+0.2
2,533,783	-		Echvi_2142	0.34	-0.0
2,533,791	+		Echvi_2142	0.35	+0.4
2,533,832	+		Echvi_2142	0.37	+0.2
2,533,832	+		Echvi_2142	0.37	-1.0
2,533,833	-		Echvi_2142	0.37	-0.3
2,533,833	-		Echvi_2142	0.37	-1.5
2,533,863	+		Echvi_2142	0.39	+0.5
2,533,925	+		Echvi_2142	0.42	+0.2
2,533,935	+		Echvi_2142	0.43	+0.6
2,533,936	-		Echvi_2142	0.43	+1.2
2,533,971	+		Echvi_2142	0.45	-1.3
2,533,980	-		Echvi_2142	0.46	-0.2
2,534,030	-		Echvi_2142	0.48	-0.2
2,534,054	-		Echvi_2142	0.50	-0.7
2,534,159	-		Echvi_2142	0.56	+0.8
2,534,175	+		Echvi_2142	0.56	+0.3
2,534,176	-		Echvi_2142	0.57	+0.1
2,534,176	-		Echvi_2142	0.57	-0.3
2,534,176	-		Echvi_2142	0.57	-0.2
2,534,179	+		Echvi_2142	0.57	-0.3
2,534,180	-		Echvi_2142	0.57	-1.0
2,534,185	+		Echvi_2142	0.57	+0.2
2,534,185	+		Echvi_2142	0.57	-0.7
2,534,185	+		Echvi_2142	0.57	-0.5
2,534,185	+		Echvi_2142	0.57	+0.9
2,534,186	-		Echvi_2142	0.57	+0.8
2,534,186	-		Echvi_2142	0.57	+0.0
2,534,264	+		Echvi_2142	0.61	-1.5
2,534,264	+		Echvi_2142	0.61	-0.4
2,534,267	-		Echvi_2142	0.62	-0.1
2,534,276	-		Echvi_2142	0.62	+0.0
2,534,335	+		Echvi_2142	0.65	+0.8
2,534,336	-		Echvi_2142	0.65	+0.1
2,534,336	-		Echvi_2142	0.65	-2.0
2,534,336	-		Echvi_2142	0.65	-0.3
2,534,341	-		Echvi_2142	0.66	+0.1
2,534,387	-		Echvi_2142	0.68	+0.1
2,534,387	-		Echvi_2142	0.68	+1.1
2,534,406	-		Echvi_2142	0.69	+0.4
2,534,417	-		Echvi_2142	0.70	+0.6
2,534,423	+		Echvi_2142	0.70	-1.4
2,534,557	+		Echvi_2142	0.78	-0.3
2,534,560	-		Echvi_2142	0.78	+0.2
2,534,610	+		Echvi_2142	0.81	+0.2
2,534,610	+		Echvi_2142	0.81	+0.3
2,534,611	-		Echvi_2142	0.81	+0.4
2,534,686	-		Echvi_2142	0.85	-0.8
2,534,686	-		Echvi_2142	0.85	-0.2
2,534,692	-		Echvi_2142	0.85	+0.4
2,534,692	-		Echvi_2142	0.85	+0.0
2,534,831	+				+0.5
2,534,832	-				-0.3
2,534,832	-				+0.3
2,534,833	+				-1.8
2,534,834	-				+0.2
2,534,834	-				+0.2
2,534,964	+				+0.3
2,534,995	-				+1.8
2,534,998	+				-0.2
2,534,999	-				-0.5
2,535,000	+				-0.7
2,535,001	-				+0.2
2,535,001	-				+0.3
2,535,001	-				+0.2
2,535,021	-				+0.2
2,535,022	+				-1.5
2,535,064	-				-0.3
2,535,070	+				+0.2
2,535,071	-				+0.2
2,535,072	+				-0.8
2,535,073	-				+0.2
2,535,465	+				+1.6
2,535,536	-				-1.6
2,535,640	+				-0.0
2,535,641	-				-0.8
2,535,748	+		Echvi_2143	0.11	+0.2
2,535,801	-		Echvi_2143	0.13	+0.9
2,535,914	+		Echvi_2143	0.17	-0.4
2,535,915	-		Echvi_2143	0.17	+0.4
2,535,931	+		Echvi_2143	0.17	-0.4
2,535,931	+		Echvi_2143	0.17	-0.8