Strain Fitness in Escherichia coli BW25113 around b3684

Experiment: Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.005 mg/ml
3,860,923	-	glvC	b3683	0.56	+1.1
3,860,977	-	glvC	b3683	0.60	-0.1
3,860,977	-	glvC	b3683	0.60	+0.1
3,860,979	+	glvC	b3683	0.60	-0.6
3,861,009	+	glvC	b3683	0.62	+0.8
3,861,064	-	glvC	b3683	0.65	+1.5
3,861,073	-	glvC	b3683	0.66	-0.6
3,861,076	-	glvC	b3683	0.66	-0.2
3,861,081	+	glvC	b3683	0.66	-1.7
3,861,104	+	glvC	b3683	0.68	-0.6
3,861,104	-	glvC	b3683	0.68	+1.7
3,861,162	+	glvC	b3683	0.71	+0.5
3,861,181	-	glvC	b3683	0.72	+1.4
3,861,181	-	glvC	b3683	0.72	+0.5
3,861,222	+	glvC	b3683	0.75	-1.8
3,861,248	+	glvC	b3683	0.77	-2.9
3,861,250	+	glvC	b3683	0.77	-0.1
3,861,250	-	glvC	b3683	0.77	+1.2
3,861,250	-	glvC	b3683	0.77	+0.8
3,861,330	+	glvC	b3683	0.82	-1.5
3,861,330	+	glvC	b3683	0.82	+2.2
3,861,425	+	glvC	b3683	0.88	-0.9
3,861,432	+	glvC	b3683	0.88	-0.8
3,861,432	+	glvC	b3683	0.88	-0.6
3,861,432	+	glvC	b3683	0.88	-1.8
3,861,503	+				+0.5
3,861,539	+				+0.4
3,861,539	+				-1.5
3,861,546	+				+1.0
3,861,586	-				-0.9
3,861,586	-				+0.4
3,861,701	+				+0.2
3,861,770	+				-0.1
3,861,805	+				+1.0
3,861,805	+				-0.4
3,861,821	-				+0.9
3,861,823	-				-1.8
3,861,883	+				+0.3
3,862,043	-	yidP	b3684	0.17	+2.0
3,862,065	+	yidP	b3684	0.20	+0.4
3,862,074	-	yidP	b3684	0.21	+0.2
3,862,098	+	yidP	b3684	0.25	+1.2
3,862,251	+	yidP	b3684	0.46	-0.4
3,862,369	+	yidP	b3684	0.62	+0.4
3,862,375	+	yidP	b3684	0.63	+0.1
3,862,375	+	yidP	b3684	0.63	+0.7
3,862,393	-	yidP	b3684	0.66	+0.2
3,862,393	-	yidP	b3684	0.66	-0.4
3,862,399	-	yidP	b3684	0.67	+0.5
3,862,403	+	yidP	b3684	0.67	+0.8
3,862,443	-	yidP	b3684	0.73	+1.2
3,862,454	-	yidP	b3684	0.74	+0.4
3,862,532	+	yidP	b3684	0.85	+1.3
3,862,532	+	yidP	b3684	0.85	+0.2
3,862,538	-	yidP	b3684	0.86	+0.7
3,862,538	-	yidP	b3684	0.86	+0.6
3,862,538	-	yidP	b3684	0.86	-0.1
3,862,572	+				-1.2
3,862,572	+				-0.4
3,862,591	+				+0.1
3,862,600	-				-0.4
3,862,625	-				+0.8
3,862,625	-				-0.4
3,862,673	-				+0.2
3,862,794	+				+0.7
3,862,802	-	yidE	b3685	0.10	+1.7
3,862,856	-	yidE	b3685	0.13	+0.3
3,862,881	-	yidE	b3685	0.15	+0.6
3,862,887	+	yidE	b3685	0.15	+0.8
3,862,891	-	yidE	b3685	0.15	+1.0
3,862,891	-	yidE	b3685	0.15	+1.2
3,862,912	+	yidE	b3685	0.17	+0.9
3,862,979	-	yidE	b3685	0.21	-0.4
3,862,981	+	yidE	b3685	0.21	-0.2
3,863,016	-	yidE	b3685	0.23	+0.6
3,863,031	-	yidE	b3685	0.24	+1.5
3,863,048	+	yidE	b3685	0.25	+0.8
3,863,048	+	yidE	b3685	0.25	+1.2
3,863,118	-	yidE	b3685	0.29	-0.2
3,863,143	-	yidE	b3685	0.31	+2.2
3,863,143	-	yidE	b3685	0.31	+0.7
3,863,160	+	yidE	b3685	0.32	+0.6
3,863,162	-	yidE	b3685	0.32	+0.6
3,863,162	-	yidE	b3685	0.32	-0.2
3,863,217	+	yidE	b3685	0.35	+0.8
3,863,217	+	yidE	b3685	0.35	-0.7
3,863,218	-	yidE	b3685	0.35	-1.5
3,863,225	+	yidE	b3685	0.35	-0.4
3,863,262	-	yidE	b3685	0.38	-0.3
3,863,300	-	yidE	b3685	0.40	+0.1
3,863,302	-	yidE	b3685	0.40	+0.4
3,863,328	+	yidE	b3685	0.42	+0.8
3,863,328	+	yidE	b3685	0.42	+0.4
3,863,336	-	yidE	b3685	0.42	-0.4
3,863,336	-	yidE	b3685	0.42	-0.4
3,863,336	-	yidE	b3685	0.42	-0.5
3,863,339	+	yidE	b3685	0.42	+1.5
3,863,339	+	yidE	b3685	0.42	+0.4
3,863,347	-	yidE	b3685	0.43	+1.8
3,863,348	-	yidE	b3685	0.43	+0.7
3,863,411	+	yidE	b3685	0.47	+1.2
3,863,414	-	yidE	b3685	0.47	-0.2
3,863,425	-	yidE	b3685	0.48	-1.8
3,863,425	-	yidE	b3685	0.48	-0.8
3,863,435	-	yidE	b3685	0.48	+1.1
3,863,435	-	yidE	b3685	0.48	+0.5
3,863,517	-	yidE	b3685	0.53	-0.5
3,863,522	-	yidE	b3685	0.53	-0.1
3,863,523	-	yidE	b3685	0.53	+0.1
3,863,545	+	yidE	b3685	0.55	+0.0
3,863,583	+	yidE	b3685	0.57	+1.6
3,863,583	+	yidE	b3685	0.57	+0.4
3,863,589	-	yidE	b3685	0.57	+0.2
3,863,636	+	yidE	b3685	0.60	-1.1
3,863,636	+	yidE	b3685	0.60	-0.9