Strain Fitness in Escherichia coli BW25113 around b2541

Experiment: Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.005 mg/ml
2,668,253	+	hcaE	b2538	0.88	-1.9
2,668,253	+	hcaE	b2538	0.88	+0.9
2,668,363	+				+0.6
2,668,539	-	hcaF	b2539	0.24	-1.3
2,668,551	-	hcaF	b2539	0.27	+0.9
2,668,551	-	hcaF	b2539	0.27	-0.1
2,668,676	+	hcaF	b2539	0.51	+1.3
2,668,676	+	hcaF	b2539	0.51	+1.2
2,668,709	+	hcaF	b2539	0.57	-0.7
2,668,715	+	hcaF	b2539	0.58	+1.1
2,668,736	-	hcaF	b2539	0.62	-0.0
2,668,759	+	hcaF	b2539	0.67	+0.7
2,668,888	-				-0.7
2,668,888	-				-0.7
2,668,925	-				-1.8
2,668,932	-				+0.1
2,668,979	-	hcaC	b2540	0.15	-0.7
2,669,083	+	hcaC	b2540	0.48	+0.3
2,669,112	-	hcaC	b2540	0.57	+1.2
2,669,166	+	hcaC	b2540	0.74	-1.1
2,669,295	+				-0.5
2,669,442	-	hcaB	b2541	0.24	-0.5
2,669,469	-				-0.1
2,669,662	+	hcaB	b2541	0.51	+0.8
2,669,678	-	hcaB	b2541	0.53	+0.9
2,669,678	-	hcaB	b2541	0.53	+0.7
2,669,716	-	hcaB	b2541	0.58	+0.7
2,669,716	-	hcaB	b2541	0.58	+0.9
2,669,827	+	hcaB	b2541	0.71	+1.8
2,669,827	+	hcaB	b2541	0.71	-0.2
2,669,835	-	hcaB	b2541	0.72	+0.5
2,669,835	-	hcaB	b2541	0.72	+1.9
2,669,946	+	hcaB	b2541	0.86	-0.1
2,669,947	-	hcaB	b2541	0.86	-1.3
2,669,951	+	hcaB	b2541	0.87	+2.1
2,669,951	+	hcaB	b2541	0.87	+0.9
2,670,153	+				-0.9
2,670,199	+	hcaD	b2542	0.11	+1.2
2,670,427	-	hcaD	b2542	0.30	-0.2
2,670,427	-	hcaD	b2542	0.30	-0.1
2,670,447	+	hcaD	b2542	0.31	-0.7
2,670,450	-	hcaD	b2542	0.32	-1.1
2,670,450	-	hcaD	b2542	0.32	+0.5
2,670,576	-	hcaD	b2542	0.42	+1.8
2,670,576	-	hcaD	b2542	0.42	+0.5
2,670,576	-	hcaD	b2542	0.42	-0.7
2,670,603	+	hcaD	b2542	0.44	-0.9
2,670,836	-	hcaD	b2542	0.64	+0.6
2,670,927	-	hcaD	b2542	0.71	+0.8
2,670,994	-	hcaD	b2542	0.77	-0.7
2,670,994	-	hcaD	b2542	0.77	+2.0
2,671,037	+	hcaD	b2542	0.80	+0.5