Strain Fitness in Escherichia coli BW25113 around b2510
Experiment: Chloramphenicol 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,632,658 | + | xseA | b2509 | 0.29 | -0.7 |
| 2,632,658 | + | xseA | b2509 | 0.29 | -0.6 |
| 2,632,670 | + | xseA | b2509 | 0.30 | -2.6 |
| 2,632,670 | + | xseA | b2509 | 0.30 | +1.9 |
| 2,632,688 | - | xseA | b2509 | 0.32 | -0.3 |
| 2,632,688 | - | -0.1 | |||
| 2,632,729 | + | xseA | b2509 | 0.35 | -0.3 |
| 2,632,729 | + | xseA | b2509 | 0.35 | -0.4 |
| 2,632,771 | - | xseA | b2509 | 0.38 | -2.0 |
| 2,632,911 | + | xseA | b2509 | 0.48 | +0.4 |
| 2,632,969 | + | xseA | b2509 | 0.52 | +0.4 |
| 2,633,042 | - | xseA | b2509 | 0.57 | +0.6 |
| 2,633,126 | + | xseA | b2509 | 0.64 | +1.0 |
| 2,633,166 | - | xseA | b2509 | 0.67 | +0.4 |
| 2,633,387 | + | xseA | b2509 | 0.83 | -0.1 |
| 2,633,387 | + | xseA | b2509 | 0.83 | -0.1 |
| 2,633,427 | - | xseA | b2509 | 0.86 | +0.9 |
| 2,633,427 | - | xseA | b2509 | 0.86 | -0.4 |
| 2,633,440 | + | xseA | b2509 | 0.87 | -0.6 |
| 2,633,691 | + | b2510 | b2510 | 0.32 | +2.5 |
| 2,633,721 | - | b2510 | b2510 | 0.46 | -1.0 |
| 2,633,787 | + | b2510 | b2510 | 0.77 | -1.2 |
| 2,633,787 | + | b2510 | b2510 | 0.77 | +0.6 |
| 2,633,795 | - | b2510 | b2510 | 0.81 | -0.8 |
| 2,633,805 | - | b2510 | b2510 | 0.85 | -0.5 |
Or see this region's nucleotide sequence