Strain Fitness in Escherichia coli BW25113 around b1014

Experiment: Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.005 mg/ml
1,073,238	+				+0.2
1,073,585	-	ycdC	b1013	0.19	-0.4
1,073,585	-	ycdC	b1013	0.19	-1.7
1,073,819	-	ycdC	b1013	0.55	-2.6
1,073,908	+	ycdC	b1013	0.69	+0.9
1,074,009	-	ycdC	b1013	0.85	-0.9
1,074,073	+				-0.2
1,074,086	-				-0.1
1,074,088	+				+1.1
1,074,088	+				+0.9
1,074,126	-				+0.8
1,074,140	+				+0.3
1,074,195	-				+0.5
1,074,215	-				+0.4
1,074,218	-				-0.7
1,074,218	-				-1.1
1,074,294	+				-0.7
1,074,306	+				+1.0
1,074,438	+				+0.1
1,074,438	+				+1.2
1,074,499	+				-0.4
1,074,529	-				-0.1
1,074,529	-				-2.3
1,074,602	-	putA	b1014	0.12	-0.2
1,074,714	+	putA	b1014	0.14	+0.3
1,074,790	+	putA	b1014	0.16	+1.1
1,074,794	+	putA	b1014	0.16	+0.7
1,074,794	+	putA	b1014	0.16	+0.9
1,074,847	+	putA	b1014	0.18	+0.1
1,074,885	+	putA	b1014	0.19	+0.2
1,074,885	+	putA	b1014	0.19	+1.5
1,074,904	+	putA	b1014	0.19	-2.1
1,074,904	+	putA	b1014	0.19	+1.4
1,075,016	+	putA	b1014	0.22	-0.7
1,075,031	+	putA	b1014	0.22	+0.9
1,075,152	+	putA	b1014	0.25	-0.7
1,075,152	+	putA	b1014	0.25	+2.2
1,075,152	+	putA	b1014	0.25	-0.1
1,075,169	+	putA	b1014	0.26	+0.9
1,075,371	-	putA	b1014	0.31	+0.7
1,075,385	+	putA	b1014	0.31	-0.2
1,075,390	+	putA	b1014	0.31	-0.1
1,075,408	+	putA	b1014	0.32	-0.7
1,075,481	+	putA	b1014	0.34	-1.7
1,075,481	+	putA	b1014	0.34	+0.9
1,075,557	-	putA	b1014	0.36	-0.7
1,075,557	-	putA	b1014	0.36	-0.4
1,075,568	+	putA	b1014	0.36	+0.5
1,075,596	+	putA	b1014	0.37	+0.9
1,075,596	+	putA	b1014	0.37	+0.2
1,075,789	+	putA	b1014	0.42	+0.9
1,075,853	-	putA	b1014	0.43	+0.9
1,075,878	-	putA	b1014	0.44	-1.4
1,075,878	-	putA	b1014	0.44	+0.9
1,076,079	+	putA	b1014	0.49	+0.2
1,076,086	+	putA	b1014	0.49	+0.1
1,076,109	+	putA	b1014	0.50	+0.7
1,076,190	-	putA	b1014	0.52	-0.0
1,076,205	-	putA	b1014	0.52	+0.9
1,076,311	-	putA	b1014	0.55	-1.1
1,076,311	-	putA	b1014	0.55	-0.7
1,076,359	-	putA	b1014	0.56	-1.1
1,076,359	-	putA	b1014	0.56	+0.5
1,076,424	-	putA	b1014	0.58	+0.4
1,076,426	+	putA	b1014	0.58	-1.4
1,076,583	-	putA	b1014	0.62	-0.9
1,076,729	-	putA	b1014	0.65	+0.1
1,076,842	-	putA	b1014	0.68	+0.9
1,076,905	+	putA	b1014	0.70	-1.7
1,076,923	-	putA	b1014	0.70	-0.8
1,076,997	-	putA	b1014	0.72	+0.7
1,076,997	-	putA	b1014	0.72	-1.7
1,077,025	-	putA	b1014	0.73	+0.5
1,077,085	-	putA	b1014	0.74	-0.3
1,077,092	+	putA	b1014	0.74	-1.1
1,077,136	+	putA	b1014	0.76	+2.2
1,077,136	+	putA	b1014	0.76	+0.7
1,077,139	-	putA	b1014	0.76	-0.1
1,077,193	+	putA	b1014	0.77	-0.7
1,077,210	-	putA	b1014	0.77	+0.4
1,077,298	-	putA	b1014	0.80	-2.4
1,077,349	-	putA	b1014	0.81	+0.7
1,077,382	-	putA	b1014	0.82	+1.5
1,077,479	-	putA	b1014	0.84	+0.6
1,077,506	-	putA	b1014	0.85	+0.8
1,077,506	-	putA	b1014	0.85	+0.2
1,077,664	-	putA	b1014	0.89	+0.5
1,077,664	-	putA	b1014	0.89	+0.2
1,077,670	-	putA	b1014	0.89	+1.1
1,077,670	-	putA	b1014	0.89	+0.2
1,077,772	-				-2.1
1,077,874	-				+1.9
1,077,874	-				-1.4
1,077,880	-				+0.4
1,077,889	-				-0.1
1,077,912	-				+0.3
1,077,938	-				+1.1
1,077,953	+				-0.5
1,078,020	+				+0.9
1,078,086	-				-0.1
1,078,086	-				-0.1
1,078,144	-				-2.4
1,078,154	-				+0.2
1,078,162	-				+0.9
1,078,206	-				-1.0
1,078,229	-				+0.2
1,078,254	+				+1.1
1,078,333	+				-1.3
1,078,333	+				+0.7
1,078,395	-				-1.1
1,078,401	+				-0.7
1,078,401	+				+1.1
1,078,421	+				-0.5
1,078,435	+				-1.4
1,078,443	-				+0.4
1,078,488	+				-1.1
1,078,531	+				-1.3
1,078,531	+				-1.1
1,078,544	-				+0.6
1,078,549	-				-0.7
1,078,582	+				+2.3
1,078,592	+				+0.5
1,078,620	-				-0.3
1,078,651	-				+1.9
1,078,651	-				-1.1
1,078,651	-				-0.1
1,078,679	-	putP	b1015	0.10	-0.3
1,078,689	+	putP	b1015	0.11	+0.8
1,078,712	-	putP	b1015	0.12	+0.5
1,078,771	-	putP	b1015	0.16	-2.3
1,078,788	+	putP	b1015	0.17	+0.6
1,078,788	+	putP	b1015	0.17	+1.3
1,078,845	+	putP	b1015	0.21	+0.1
1,078,902	+	putP	b1015	0.25	+1.8
1,078,902	+	putP	b1015	0.25	+0.9
1,078,958	+	putP	b1015	0.28	+0.4
1,079,051	-	putP	b1015	0.35	+0.4
1,079,051	-	putP	b1015	0.35	-1.6
1,079,087	+	putP	b1015	0.37	-0.7
1,079,100	-	putP	b1015	0.38	+0.6