Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4670

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
5,207,547	+		PfGW456L13_4668	0.82	-2.9
5,207,548	-		PfGW456L13_4668	0.82	+0.4
5,207,739	-				-1.5
5,207,752	-				+0.0
5,207,752	-				+0.5
5,207,752	-				+0.3
5,207,752	-				-0.6
5,207,752	-				-0.5
5,207,784	-				+1.2
5,207,788	-				-0.1
5,207,852	+				+1.2
5,207,869	+				-3.1
5,207,869	+				-3.1
5,208,038	+		PfGW456L13_4669	0.43	-2.1
5,208,038	+		PfGW456L13_4669	0.43	-0.2
5,208,038	+				-1.5
5,208,039	-		PfGW456L13_4669	0.44	-0.3
5,208,039	-		PfGW456L13_4669	0.44	-3.1
5,208,039	-		PfGW456L13_4669	0.44	+0.8
5,208,045	+		PfGW456L13_4669	0.45	+1.6
5,208,046	-		PfGW456L13_4669	0.45	-1.9
5,208,161	+		PfGW456L13_4669	0.68	-1.9
5,208,161	+		PfGW456L13_4669	0.68	-1.3
5,208,161	+		PfGW456L13_4669	0.68	-0.9
5,208,162	-		PfGW456L13_4669	0.68	+2.3
5,208,171	-		PfGW456L13_4669	0.70	+1.3
5,208,171	-		PfGW456L13_4669	0.70	-0.1
5,208,171	-		PfGW456L13_4669	0.70	-0.1
5,208,171	-		PfGW456L13_4669	0.70	+1.3
5,208,357	+				+1.1
5,208,357	+				+1.9
5,208,357	+				+0.4
5,208,357	+				-2.0
5,208,357	+				-2.3
5,208,357	+				-2.4
5,208,358	-				-1.8
5,208,402	+				+1.2
5,208,402	+				-0.5
5,208,402	+				-2.0
5,208,402	+				+0.6
5,208,466	+				+1.3
5,208,504	+		PfGW456L13_4670	0.19	-0.6
5,208,504	+				+0.3
5,208,504	+		PfGW456L13_4670	0.19	+0.2
5,208,504	+		PfGW456L13_4670	0.19	-1.3
5,208,504	+		PfGW456L13_4670	0.19	+0.7
5,208,504	+		PfGW456L13_4670	0.19	+2.2
5,208,504	+		PfGW456L13_4670	0.19	+0.6
5,208,504	+		PfGW456L13_4670	0.19	+0.7
5,208,504	+		PfGW456L13_4670	0.19	+1.1
5,208,505	-		PfGW456L13_4670	0.19	-0.0
5,208,505	-		PfGW456L13_4670	0.19	+2.6
5,208,505	-		PfGW456L13_4670	0.19	+1.1
5,208,765	+				+0.1
5,208,798	+				-3.1
5,208,798	+				-3.1
5,208,799	-				+0.6
5,208,822	+				-1.0
5,208,823	-				+0.5
5,208,823	-				-2.3
5,208,881	-				-2.0
5,208,887	-				+0.5
5,208,965	+				+1.1
5,208,965	+				-2.8
5,208,965	+				+0.3
5,208,965	+				-1.2
5,208,965	+				-3.7
5,208,966	-				-1.0
5,208,966	-				-0.6
5,208,966	-				+0.8
5,208,966	-				-1.8
5,208,966	-				-3.7
5,208,966	-				-3.6
5,208,969	+				-1.3
5,208,969	+				-2.4
5,208,970	-				-1.1
5,208,970	-				-0.7
5,208,970	-				-1.8
5,208,970	-				+1.0
5,208,970	-				-0.8
5,208,970	-				-3.0
5,208,997	+				-0.1
5,209,031	+		PfGW456L13_4671	0.10	+2.1
5,209,031	+		PfGW456L13_4671	0.10	-3.5
5,209,031	+		PfGW456L13_4671	0.10	+1.1
5,209,032	-		PfGW456L13_4671	0.10	-2.8
5,209,032	-		PfGW456L13_4671	0.10	+0.6
5,209,032	-		PfGW456L13_4671	0.10	-4.4
5,209,032	-		PfGW456L13_4671	0.10	-0.7
5,209,032	-		PfGW456L13_4671	0.10	-4.6
5,209,032	-		PfGW456L13_4671	0.10	-3.5
5,209,136	+		PfGW456L13_4671	0.25	+1.4
5,209,208	-		PfGW456L13_4671	0.34	-4.0
5,209,208	-		PfGW456L13_4671	0.34	-2.5
5,209,306	-		PfGW456L13_4671	0.48	-4.4
5,209,306	-		PfGW456L13_4671	0.48	-3.5
5,209,423	+		PfGW456L13_4671	0.64	+2.1
5,209,423	+		PfGW456L13_4671	0.64	+1.9
5,209,423	+		PfGW456L13_4671	0.64	-2.1
5,209,423	+		PfGW456L13_4671	0.64	+1.9
5,209,423	+		PfGW456L13_4671	0.64	+2.3
5,209,423	+		PfGW456L13_4671	0.64	+1.5
5,209,423	+		PfGW456L13_4671	0.64	+2.8
5,209,423	+		PfGW456L13_4671	0.64	-2.9
5,209,423	+		PfGW456L13_4671	0.64	-1.1
5,209,423	+		PfGW456L13_4671	0.64	-2.9
5,209,423	+		PfGW456L13_4671	0.64	-1.0
5,209,423	+		PfGW456L13_4671	0.64	-0.6
5,209,423	+		PfGW456L13_4671	0.64	-1.4
5,209,423	+		PfGW456L13_4671	0.64	+2.3
5,209,423	+		PfGW456L13_4671	0.64	-2.0
5,209,423	+		PfGW456L13_4671	0.64	-2.5
5,209,423	+		PfGW456L13_4671	0.64	+1.1
5,209,423	+		PfGW456L13_4671	0.64	+1.2
5,209,423	+		PfGW456L13_4671	0.64	-2.5
5,209,423	+		PfGW456L13_4671	0.64	+0.9
5,209,423	+		PfGW456L13_4671	0.64	-1.3
5,209,423	+		PfGW456L13_4671	0.64	+2.1
5,209,423	+		PfGW456L13_4671	0.64	-2.4
5,209,423	+		PfGW456L13_4671	0.64	+0.8
5,209,424	-		PfGW456L13_4671	0.64	-3.5
5,209,424	-		PfGW456L13_4671	0.64	-3.0
5,209,424	-		PfGW456L13_4671	0.64	-2.9
5,209,424	-		PfGW456L13_4671	0.64	-3.3
5,209,424	-		PfGW456L13_4671	0.64	-1.0
5,209,424	-		PfGW456L13_4671	0.64	-2.5
5,209,424	-		PfGW456L13_4671	0.64	-3.9
5,209,424	-		PfGW456L13_4671	0.64	+0.2
5,209,424	-		PfGW456L13_4671	0.64	-3.5
5,209,424	-		PfGW456L13_4671	0.64	-1.9
5,209,424	-		PfGW456L13_4671	0.64	-5.1
5,209,424	-		PfGW456L13_4671	0.64	-4.5
5,209,424	-		PfGW456L13_4671	0.64	-4.9
5,209,424	-		PfGW456L13_4671	0.64	+0.2
5,209,424	-		PfGW456L13_4671	0.64	-2.7
5,209,424	-		PfGW456L13_4671	0.64	-5.1
5,209,424	-		PfGW456L13_4671	0.64	-3.5
5,209,424	-		PfGW456L13_4671	0.64	-2.9
5,209,424	-		PfGW456L13_4671	0.64	-2.9
5,209,424	-		PfGW456L13_4671	0.64	-2.9
5,209,424	-		PfGW456L13_4671	0.64	-3.1
5,209,424	-		PfGW456L13_4671	0.64	-4.0
5,209,424	-		PfGW456L13_4671	0.64	-2.9
5,209,424	-		PfGW456L13_4671	0.64	-4.0
5,209,424	-		PfGW456L13_4671	0.64	-4.3
5,209,425	+		PfGW456L13_4671	0.64	-3.1
5,209,425	+		PfGW456L13_4671	0.64	-0.9
5,209,425	+		PfGW456L13_4671	0.64	+1.9
5,209,426	-		PfGW456L13_4671	0.64	-1.3
5,209,426	-		PfGW456L13_4671	0.64	-2.8
5,209,426	-		PfGW456L13_4671	0.64	-2.1
5,209,426	-		PfGW456L13_4671	0.64	-3.8
5,209,520	+		PfGW456L13_4671	0.77	-1.3
5,209,660	+				-2.2
5,209,661	-				-4.6
5,209,663	+				-0.1
5,209,663	+				-2.7
5,209,663	+				-3.4
5,209,663	+				+0.7
5,209,663	+				-1.7
5,209,664	-				-3.4
5,209,664	-				-2.8
5,209,664	-				-0.7
5,209,664	-				-2.4
5,209,668	+				+2.4
5,209,668	+				-3.6
5,209,669	-				-1.7
5,209,672	+				-2.6
5,209,672	+				+1.9
5,209,672	+				-1.3
5,209,672	+				-0.3
5,209,673	-				-0.3
5,209,673	-				-4.5
5,209,690	-				+0.6
5,209,749	+				+1.3
5,209,749	+				+0.8
5,209,750	-				+1.9
5,209,768	+				-1.5
5,209,768	+				-0.6