Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3816

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
4,283,185	+		PfGW456L13_3814	0.47	-0.4
4,283,185	+		PfGW456L13_3814	0.47	+0.4
4,283,185	+		PfGW456L13_3814	0.47	+0.3
4,283,185	+		PfGW456L13_3814	0.47	-0.2
4,283,185	+		PfGW456L13_3814	0.47	+1.3
4,283,186	-		PfGW456L13_3814	0.48	+1.0
4,283,187	+		PfGW456L13_3814	0.48	+0.0
4,283,187	+		PfGW456L13_3814	0.48	-0.0
4,283,187	+		PfGW456L13_3814	0.48	-2.5
4,283,187	+		PfGW456L13_3814	0.48	-3.1
4,283,187	+		PfGW456L13_3814	0.48	-3.7
4,283,187	+		PfGW456L13_3814	0.48	-1.0
4,283,187	+		PfGW456L13_3814	0.48	+0.4
4,283,187	+		PfGW456L13_3814	0.48	+1.7
4,283,187	+		PfGW456L13_3814	0.48	-0.2
4,283,187	+		PfGW456L13_3814	0.48	+0.1
4,283,187	+		PfGW456L13_3814	0.48	-1.5
4,283,187	+		PfGW456L13_3814	0.48	-2.6
4,283,187	+		PfGW456L13_3814	0.48	-0.0
4,283,187	+		PfGW456L13_3814	0.48	+0.6
4,283,187	+		PfGW456L13_3814	0.48	+0.4
4,283,188	-		PfGW456L13_3814	0.48	-0.5
4,283,188	-		PfGW456L13_3814	0.48	+0.2
4,283,188	-		PfGW456L13_3814	0.48	-1.6
4,283,188	-		PfGW456L13_3814	0.48	+0.0
4,283,188	-		PfGW456L13_3814	0.48	-0.8
4,283,227	+				-0.6
4,283,228	-		PfGW456L13_3814	0.59	+1.1
4,283,228	-		PfGW456L13_3814	0.59	+0.6
4,283,228	-		PfGW456L13_3814	0.59	-0.2
4,283,228	-		PfGW456L13_3814	0.59	-2.8
4,283,228	-		PfGW456L13_3814	0.59	-0.8
4,283,228	-		PfGW456L13_3814	0.59	-4.0
4,283,228	-		PfGW456L13_3814	0.59	-1.3
4,283,228	-		PfGW456L13_3814	0.59	+0.1
4,283,311	+		PfGW456L13_3814	0.82	+1.2
4,283,345	+				-3.7
4,283,363	-				-2.4
4,283,373	+				-0.0
4,283,374	-				+0.3
4,283,592	-		PfGW456L13_3815	0.30	-2.9
4,283,592	-		PfGW456L13_3815	0.30	+0.3
4,283,592	-		PfGW456L13_3815	0.30	+0.5
4,283,606	+		PfGW456L13_3815	0.32	-3.3
4,283,634	-		PfGW456L13_3815	0.36	-1.1
4,283,711	-		PfGW456L13_3815	0.47	+0.7
4,283,711	-		PfGW456L13_3815	0.47	-0.2
4,283,711	-		PfGW456L13_3815	0.47	+0.5
4,283,711	-		PfGW456L13_3815	0.47	+2.3
4,283,751	+		PfGW456L13_3815	0.53	-1.4
4,283,752	-		PfGW456L13_3815	0.53	-1.9
4,283,752	-		PfGW456L13_3815	0.53	+1.5
4,283,752	-		PfGW456L13_3815	0.53	-2.7
4,283,752	-		PfGW456L13_3815	0.53	-0.9
4,283,812	+		PfGW456L13_3815	0.61	-1.8
4,283,813	-		PfGW456L13_3815	0.62	-1.3
4,283,813	-		PfGW456L13_3815	0.62	-0.1
4,283,813	-		PfGW456L13_3815	0.62	-3.2
4,283,813	-		PfGW456L13_3815	0.62	-3.6
4,283,835	+		PfGW456L13_3815	0.65	-0.1
4,283,870	-		PfGW456L13_3815	0.70	+1.0
4,283,870	-		PfGW456L13_3815	0.70	+0.3
4,284,003	-		PfGW456L13_3815	0.89	-2.9
4,284,003	-		PfGW456L13_3815	0.89	+0.6
4,284,068	+				+0.9
4,284,068	+				-0.8
4,284,069	-				-3.0
4,284,069	-				-0.1
4,284,166	+				+2.4
4,284,166	+				-1.4
4,284,166	+				+1.1
4,284,166	+				+0.7
4,284,166	+				+2.0
4,284,166	+				-2.7
4,284,166	+				-3.3
4,284,167	-				+3.3
4,284,167	-				+1.7
4,284,167	-				-1.8
4,284,197	+				+2.1
4,284,198	-		PfGW456L13_3816	0.10	-1.0
4,284,226	+		PfGW456L13_3816	0.14	-0.2
4,284,275	-		PfGW456L13_3816	0.20	-2.2
4,284,439	+		PfGW456L13_3816	0.41	+1.3
4,284,540	+		PfGW456L13_3816	0.54	-0.8
4,284,541	-		PfGW456L13_3816	0.54	+0.9
4,284,541	-		PfGW456L13_3816	0.54	-3.5
4,284,541	-		PfGW456L13_3816	0.54	+0.5
4,284,592	+		PfGW456L13_3816	0.61	-2.7
4,284,592	+		PfGW456L13_3816	0.61	+0.8
4,284,592	+		PfGW456L13_3816	0.61	-0.4
4,284,593	-		PfGW456L13_3816	0.61	-0.1
4,284,700	+		PfGW456L13_3816	0.75	-0.3
4,284,701	-		PfGW456L13_3816	0.75	+0.3
4,284,730	-		PfGW456L13_3816	0.79	-1.8
4,284,819	-				+0.5
4,284,843	-				-2.3
4,284,897	+				+0.7
4,284,897	+				+1.0
4,284,898	-				-0.1
4,284,898	-				+1.7
4,284,898	-				-1.6
4,284,898	-				-0.1
4,284,968	+				+0.8
4,284,968	+				-0.8
4,284,968	+				-0.8
4,284,968	+				-0.9
4,284,968	+				-0.8
4,284,968	+				-1.2
4,284,968	+				-0.3
4,284,968	+				+0.3
4,284,969	-				+1.2
4,284,969	-				+1.2
4,284,969	-				-0.4
4,284,969	-				+1.3
4,284,969	-				-0.1
4,285,020	+				+0.3
4,285,020	+				+1.3
4,285,020	+				-1.2
4,285,021	-				-0.0
4,285,021	-				+0.8
4,285,024	+				-0.2
4,285,024	+				+0.1
4,285,025	-				+0.8
4,285,025	-				-1.3
4,285,079	+				-0.5
4,285,080	-				+0.8
4,285,080	-				-2.4
4,285,118	+				+1.7
4,285,118	+				-3.6
4,285,160	+		PfGW456L13_3817	0.11	-3.3
4,285,214	+		PfGW456L13_3817	0.16	-0.5
4,285,214	+		PfGW456L13_3817	0.16	-0.5
4,285,214	+		PfGW456L13_3817	0.16	-0.6
4,285,214	+		PfGW456L13_3817	0.16	+1.4
4,285,214	+		PfGW456L13_3817	0.16	+0.1
4,285,215	-		PfGW456L13_3817	0.16	+0.0
4,285,215	-		PfGW456L13_3817	0.16	+1.2
4,285,460	+		PfGW456L13_3817	0.40	-2.1
4,285,460	+		PfGW456L13_3817	0.40	+0.2
4,285,601	+		PfGW456L13_3817	0.54	+2.2
4,285,643	+		PfGW456L13_3817	0.58	-2.5
4,285,644	-		PfGW456L13_3817	0.58	+2.3
4,285,644	-		PfGW456L13_3817	0.58	-0.1
4,285,644	-		PfGW456L13_3817	0.58	+2.9
4,285,644	-		PfGW456L13_3817	0.58	-0.0
4,285,745	+		PfGW456L13_3817	0.68	+0.4
4,285,746	-		PfGW456L13_3817	0.69	+0.8
4,285,746	-		PfGW456L13_3817	0.69	+1.6
4,285,746	-		PfGW456L13_3817	0.69	-0.1
4,285,746	-				+3.4
4,285,746	-		PfGW456L13_3817	0.69	-3.3
4,285,877	+		PfGW456L13_3817	0.81	+0.3
4,285,877	+		PfGW456L13_3817	0.81	-1.0
4,285,878	-		PfGW456L13_3817	0.82	-0.7
4,285,878	-		PfGW456L13_3817	0.82	+0.1
4,285,878	-		PfGW456L13_3817	0.82	-3.7