Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3156

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,532,818	-		PfGW456L13_3155	0.32	+1.1
3,532,974	-		PfGW456L13_3155	0.44	+0.3
3,533,127	-		PfGW456L13_3155	0.56	-1.2
3,533,127	-		PfGW456L13_3155	0.56	-3.8
3,533,127	-		PfGW456L13_3155	0.56	-0.3
3,533,127	-		PfGW456L13_3155	0.56	+1.1
3,533,127	-		PfGW456L13_3155	0.56	+0.7
3,533,128	+		PfGW456L13_3155	0.56	+0.8
3,533,128	+		PfGW456L13_3155	0.56	-0.5
3,533,128	+		PfGW456L13_3155	0.56	+1.5
3,533,128	+		PfGW456L13_3155	0.56	+1.6
3,533,129	-		PfGW456L13_3155	0.56	-1.1
3,533,129	-		PfGW456L13_3155	0.56	+3.0
3,533,129	-		PfGW456L13_3155	0.56	-0.8
3,533,141	+		PfGW456L13_3155	0.57	-1.4
3,533,141	+		PfGW456L13_3155	0.57	+0.5
3,533,141	+		PfGW456L13_3155	0.57	+0.2
3,533,142	-		PfGW456L13_3155	0.57	+0.9
3,533,142	-		PfGW456L13_3155	0.57	-0.8
3,533,142	-		PfGW456L13_3155	0.57	+1.1
3,533,142	-		PfGW456L13_3155	0.57	+0.5
3,533,142	-		PfGW456L13_3155	0.57	+2.8
3,533,142	-		PfGW456L13_3155	0.57	-0.6
3,533,153	+		PfGW456L13_3155	0.58	-2.2
3,533,154	-		PfGW456L13_3155	0.58	-1.0
3,533,154	-		PfGW456L13_3155	0.58	-3.0
3,533,457	-		PfGW456L13_3155	0.82	+1.3
3,533,477	+		PfGW456L13_3155	0.83	-0.5
3,533,477	+		PfGW456L13_3155	0.83	-1.4
3,533,477	+		PfGW456L13_3155	0.83	-2.0
3,533,477	+		PfGW456L13_3155	0.83	+0.0
3,533,478	-		PfGW456L13_3155	0.83	-3.8
3,533,478	-		PfGW456L13_3155	0.83	+2.4
3,533,478	-		PfGW456L13_3155	0.83	+1.1
3,533,489	+		PfGW456L13_3155	0.84	+0.2
3,533,489	+		PfGW456L13_3155	0.84	-0.3
3,533,490	-		PfGW456L13_3155	0.84	-2.2
3,533,490	-		PfGW456L13_3155	0.84	+0.0
3,533,490	-		PfGW456L13_3155	0.84	+2.1
3,533,490	-		PfGW456L13_3155	0.84	-2.8
3,533,571	-				-0.8
3,533,820	+				+0.7
3,533,826	+				+1.8
3,533,826	+				-1.2
3,533,826	+				-0.0
3,533,826	+				+0.1
3,533,826	+				+0.5
3,533,826	+				+0.2
3,533,827	-				-0.5
3,533,986	+		PfGW456L13_3156	0.33	+0.9
3,534,008	+		PfGW456L13_3156	0.37	+0.1
3,534,008	+		PfGW456L13_3156	0.37	+0.4
3,534,008	+		PfGW456L13_3156	0.37	-0.3
3,534,008	+		PfGW456L13_3156	0.37	-3.0
3,534,009	-		PfGW456L13_3156	0.38	+0.8
3,534,009	-		PfGW456L13_3156	0.38	+1.4
3,534,009	-		PfGW456L13_3156	0.38	-1.5
3,534,009	-		PfGW456L13_3156	0.38	-2.8
3,534,009	-		PfGW456L13_3156	0.38	+0.5
3,534,068	-		PfGW456L13_3156	0.49	-0.2
3,534,271	+		PfGW456L13_3156	0.86	-3.0
3,534,272	-		PfGW456L13_3156	0.87	-0.2
3,534,272	-		PfGW456L13_3156	0.87	-0.5
3,534,272	-		PfGW456L13_3156	0.87	+1.8
3,534,339	+				-4.4
3,534,339	+				-2.0
3,534,340	-				-0.5
3,534,340	-				-1.8
3,534,340	-				+0.9
3,534,341	+				+0.4
3,534,341	+				-1.0
3,534,341	+				+1.2
3,534,341	+				+0.9
3,534,342	-				-3.8
3,534,342	-				-3.6
3,534,342	-				+1.2
3,534,342	-				-2.0
3,534,342	-				+0.3
3,534,342	-				+1.3
3,534,342	-				-1.2
3,534,342	-				+1.4
3,534,342	-				+0.1
3,534,519	+				+1.7
3,534,519	+				-0.9
3,534,519	+				-0.5
3,534,520	-				+0.3
3,534,520	-				+0.1
3,534,520	-				-3.1
3,534,522	-				-2.7
3,534,532	+				-0.1
3,534,532	+				-0.6
3,534,533	-				-0.8
3,534,535	+				-2.7
3,534,535	+				-0.1
3,534,535	+				-2.1
3,534,536	-				-0.5
3,534,558	+				-3.3
3,534,558	+				-0.1
3,534,558	+				+2.2
3,534,558	+				-2.4
3,534,558	+				-2.8
3,534,558	+				+1.7
3,534,558	+				+1.4
3,534,559	-				+1.0
3,534,559	-				+1.9
3,534,559	-				-3.6
3,534,559	-				+0.9
3,534,559	-				-1.3
3,534,559	-				+0.3
3,534,559	-				+0.6
3,534,559	-				+0.1
3,534,559	-				+1.9
3,534,559	-				-2.5
3,534,559	-				+0.4
3,534,559	-				-1.9
3,534,559	-				-0.0
3,534,559	-				-1.0
3,534,559	-				-0.3
3,534,559	-				-1.2
3,534,559	-				-0.1
3,534,559	-				+0.8
3,534,559	-				-1.9
3,534,559	-				-2.0
3,534,559	-				+0.7
3,534,559	-				+1.2
3,534,652	+				-1.7
3,534,653	-				-0.7
3,534,653	-				-0.6
3,534,653	-				-2.6
3,534,653	-				-3.1
3,534,653	-				+4.3
3,534,691	+				+1.7
3,534,762	+		PfGW456L13_3157	0.13	+0.4
3,534,762	+		PfGW456L13_3157	0.13	-0.9
3,534,762	+		PfGW456L13_3157	0.13	+0.9
3,534,762	+		PfGW456L13_3157	0.13	-2.3
3,534,762	+		PfGW456L13_3157	0.13	+1.0
3,534,762	+		PfGW456L13_3157	0.13	+2.4
3,534,762	+		PfGW456L13_3157	0.13	-0.6
3,534,762	+				+0.8
3,534,762	+		PfGW456L13_3157	0.13	-0.2
3,534,762	+		PfGW456L13_3157	0.13	-0.0
3,534,763	-		PfGW456L13_3157	0.13	-3.1
3,534,763	-		PfGW456L13_3157	0.13	+1.2
3,534,763	-		PfGW456L13_3157	0.13	+1.4
3,534,763	-		PfGW456L13_3157	0.13	+2.0
3,534,763	-		PfGW456L13_3157	0.13	-2.2
3,534,763	-		PfGW456L13_3157	0.13	-3.0
3,534,763	-		PfGW456L13_3157	0.13	+1.5
3,534,763	-		PfGW456L13_3157	0.13	+1.1
3,534,763	-		PfGW456L13_3157	0.13	+0.9
3,534,763	-		PfGW456L13_3157	0.13	+0.4
3,534,763	-		PfGW456L13_3157	0.13	-0.3
3,534,763	-		PfGW456L13_3157	0.13	+1.0
3,534,835	+		PfGW456L13_3157	0.18	+0.9
3,534,850	+		PfGW456L13_3157	0.19	-0.4
3,534,850	+		PfGW456L13_3157	0.19	+1.8
3,534,851	-		PfGW456L13_3157	0.19	+0.3
3,534,851	-		PfGW456L13_3157	0.19	-0.1
3,534,851	-		PfGW456L13_3157	0.19	+0.3
3,534,851	-		PfGW456L13_3157	0.19	+1.0
3,534,865	+		PfGW456L13_3157	0.20	-0.3
3,534,865	+		PfGW456L13_3157	0.20	+0.7
3,534,865	+		PfGW456L13_3157	0.20	+2.1
3,534,865	+		PfGW456L13_3157	0.20	+0.2
3,534,865	+		PfGW456L13_3157	0.20	-0.6
3,534,866	-		PfGW456L13_3157	0.20	+0.8
3,534,866	-		PfGW456L13_3157	0.20	+1.4
3,534,866	-		PfGW456L13_3157	0.20	+0.4
3,534,866	-		PfGW456L13_3157	0.20	+1.5
3,534,889	+		PfGW456L13_3157	0.21	-2.3
3,534,947	-		PfGW456L13_3157	0.25	-2.4
3,535,121	-		PfGW456L13_3157	0.36	+1.1
3,535,159	-		PfGW456L13_3157	0.38	+0.5
3,535,210	+		PfGW456L13_3157	0.42	+1.4
3,535,210	+		PfGW456L13_3157	0.42	+0.8
3,535,211	-		PfGW456L13_3157	0.42	-2.4
3,535,211	-		PfGW456L13_3157	0.42	+0.6
3,535,218	+		PfGW456L13_3157	0.42	-2.5
3,535,222	+		PfGW456L13_3157	0.42	-0.3
3,535,222	+		PfGW456L13_3157	0.42	+0.1
3,535,222	+		PfGW456L13_3157	0.42	-1.5
3,535,222	+		PfGW456L13_3157	0.42	-1.1
3,535,223	-		PfGW456L13_3157	0.42	+2.1
3,535,223	-		PfGW456L13_3157	0.42	-3.4
3,535,223	-		PfGW456L13_3157	0.42	+0.1