Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2582

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,868,002	-		PfGW456L13_2580	0.74	+2.2
2,868,045	+				-2.0
2,868,045	+				+0.3
2,868,045	+				-2.3
2,868,045	+				+2.3
2,868,201	+				-1.0
2,868,202	-				-3.7
2,868,224	+				+1.0
2,868,224	+				+0.1
2,868,224	+				+0.5
2,868,224	+				+1.2
2,868,224	+				+0.6
2,868,224	+				+1.0
2,868,224	+				-0.7
2,868,224	+				-0.1
2,868,224	+				+0.7
2,868,224	+				+1.6
2,868,224	+				-1.3
2,868,225	-				+0.3
2,868,225	-				-2.4
2,868,225	-				+1.4
2,868,225	-				+0.4
2,868,225	-				+0.5
2,868,230	+				+1.2
2,868,231	-				+1.3
2,868,231	-				+0.2
2,868,249	-		PfGW456L13_2581	0.12	+1.2
2,868,323	+		PfGW456L13_2581	0.22	-0.6
2,868,357	-		PfGW456L13_2581	0.26	-3.5
2,868,697	+		PfGW456L13_2581	0.71	-3.0
2,868,698	-		PfGW456L13_2581	0.71	-2.4
2,868,698	-		PfGW456L13_2581	0.71	-2.4
2,868,698	-		PfGW456L13_2581	0.71	-0.8
2,868,872	+				-1.2
2,868,872	+				-1.0
2,868,873	-				-1.2
2,868,873	-				-1.4
2,869,011	+		PfGW456L13_2582	0.20	-3.1
2,869,012	-		PfGW456L13_2582	0.20	+0.5
2,869,012	-		PfGW456L13_2582	0.20	+1.0
2,869,012	-		PfGW456L13_2582	0.20	-2.3
2,869,039	+		PfGW456L13_2582	0.26	-2.8
2,869,241	-		PfGW456L13_2582	0.65	+1.2
2,869,428	-				+1.0
2,869,435	-				-0.1
2,869,446	+				+0.0
2,869,446	+				-2.2
2,869,447	-				+0.3
2,869,447	-				+1.6
2,869,471	+				-1.0
2,869,490	+				+0.4
2,869,509	+				-0.7
2,869,578	+				+1.1
2,869,578	+				-2.8
2,869,578	+				+0.4
2,869,578	+				+1.8
2,869,578	+				+2.3
2,869,579	-				+2.3
2,869,579	-				-0.2
2,869,685	+		PfGW456L13_2583	0.10	+1.3
2,869,841	+		PfGW456L13_2583	0.25	+0.0
2,869,841	+		PfGW456L13_2583	0.25	-0.8
2,869,841	+		PfGW456L13_2583	0.25	+0.4
2,869,916	+		PfGW456L13_2583	0.31	+0.3
2,869,917	-		PfGW456L13_2583	0.32	-2.2
2,869,917	-		PfGW456L13_2583	0.32	-1.3
2,869,917	-		PfGW456L13_2583	0.32	+0.4
2,869,917	-		PfGW456L13_2583	0.32	-0.7
2,869,917	-		PfGW456L13_2583	0.32	-0.2
2,870,042	+		PfGW456L13_2583	0.43	-0.9
2,870,043	-		PfGW456L13_2583	0.43	-2.5
2,870,043	-		PfGW456L13_2583	0.43	+1.1
2,870,180	+		PfGW456L13_2583	0.56	-0.8
2,870,181	-		PfGW456L13_2583	0.56	+0.1
2,870,181	-		PfGW456L13_2583	0.56	+0.7
2,870,195	+		PfGW456L13_2583	0.57	-1.7
2,870,195	+		PfGW456L13_2583	0.57	-3.3
2,870,195	+		PfGW456L13_2583	0.57	+1.1
2,870,195	+		PfGW456L13_2583	0.57	-1.0
2,870,195	+		PfGW456L13_2583	0.57	-1.5
2,870,195	+		PfGW456L13_2583	0.57	-0.1
2,870,195	+		PfGW456L13_2583	0.57	-3.0
2,870,195	+		PfGW456L13_2583	0.57	-4.1
2,870,195	+		PfGW456L13_2583	0.57	+0.2
2,870,195	+		PfGW456L13_2583	0.57	+0.9
2,870,195	+		PfGW456L13_2583	0.57	+3.0
2,870,195	+		PfGW456L13_2583	0.57	+1.3
2,870,195	+		PfGW456L13_2583	0.57	-1.7
2,870,195	+		PfGW456L13_2583	0.57	-0.6
2,870,195	+				+1.0
2,870,195	+		PfGW456L13_2583	0.57	+1.8
2,870,195	+		PfGW456L13_2583	0.57	-0.3
2,870,195	+		PfGW456L13_2583	0.57	-0.1
2,870,195	+				-0.6
2,870,195	+		PfGW456L13_2583	0.57	-4.2
2,870,195	+		PfGW456L13_2583	0.57	-2.0
2,870,195	+		PfGW456L13_2583	0.57	+1.0
2,870,196	-		PfGW456L13_2583	0.57	+1.1
2,870,196	-		PfGW456L13_2583	0.57	-1.5
2,870,196	-		PfGW456L13_2583	0.57	+0.4
2,870,196	-		PfGW456L13_2583	0.57	+2.1
2,870,196	-		PfGW456L13_2583	0.57	-0.1
2,870,196	-		PfGW456L13_2583	0.57	-2.2
2,870,196	-		PfGW456L13_2583	0.57	+0.9
2,870,196	-		PfGW456L13_2583	0.57	-3.2
2,870,196	-		PfGW456L13_2583	0.57	+1.7
2,870,196	-		PfGW456L13_2583	0.57	-0.3
2,870,196	-		PfGW456L13_2583	0.57	+1.1
2,870,196	-		PfGW456L13_2583	0.57	+0.3
2,870,196	-		PfGW456L13_2583	0.57	+0.5
2,870,196	-		PfGW456L13_2583	0.57	-0.7
2,870,196	-		PfGW456L13_2583	0.57	-0.5
2,870,197	+		PfGW456L13_2583	0.57	+0.4
2,870,197	+		PfGW456L13_2583	0.57	+1.6
2,870,197	+		PfGW456L13_2583	0.57	+0.6
2,870,197	+		PfGW456L13_2583	0.57	-0.6
2,870,197	+		PfGW456L13_2583	0.57	-1.7
2,870,197	+		PfGW456L13_2583	0.57	+0.6
2,870,197	+		PfGW456L13_2583	0.57	-3.3
2,870,197	+		PfGW456L13_2583	0.57	+0.6
2,870,197	+		PfGW456L13_2583	0.57	-0.3
2,870,197	+		PfGW456L13_2583	0.57	+0.8
2,870,197	+		PfGW456L13_2583	0.57	-0.6
2,870,197	+		PfGW456L13_2583	0.57	-0.7
2,870,197	+		PfGW456L13_2583	0.57	+1.3
2,870,197	+		PfGW456L13_2583	0.57	-1.3
2,870,197	+		PfGW456L13_2583	0.57	-0.7
2,870,197	+		PfGW456L13_2583	0.57	+0.8
2,870,197	+		PfGW456L13_2583	0.57	-2.9
2,870,197	+		PfGW456L13_2583	0.57	+1.6
2,870,198	-		PfGW456L13_2583	0.57	+0.5
2,870,198	-		PfGW456L13_2583	0.57	+0.0
2,870,198	-		PfGW456L13_2583	0.57	+0.9
2,870,198	-		PfGW456L13_2583	0.57	+0.4
2,870,198	-		PfGW456L13_2583	0.57	+0.0
2,870,198	-		PfGW456L13_2583	0.57	-1.7
2,870,198	-		PfGW456L13_2583	0.57	+0.5
2,870,198	-		PfGW456L13_2583	0.57	+1.2
2,870,198	-		PfGW456L13_2583	0.57	-1.2
2,870,198	-		PfGW456L13_2583	0.57	+1.4
2,870,198	-		PfGW456L13_2583	0.57	+0.1
2,870,198	-		PfGW456L13_2583	0.57	+1.9
2,870,198	-		PfGW456L13_2583	0.57	-2.5
2,870,217	-		PfGW456L13_2583	0.59	-1.9
2,870,341	+		PfGW456L13_2583	0.71	-0.6
2,870,341	+		PfGW456L13_2583	0.71	+2.1
2,870,341	+		PfGW456L13_2583	0.71	-0.4
2,870,342	-		PfGW456L13_2583	0.71	+0.7
2,870,343	+		PfGW456L13_2583	0.71	+0.2
2,870,344	-		PfGW456L13_2583	0.71	+0.3