Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2060

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,262,703	-		PfGW456L13_2059	0.47	+0.2
2,262,785	-		PfGW456L13_2059	0.53	-1.9
2,262,785	-		PfGW456L13_2059	0.53	-3.0
2,262,791	+		PfGW456L13_2059	0.53	-2.7
2,262,792	-		PfGW456L13_2059	0.54	-0.4
2,262,792	-		PfGW456L13_2059	0.54	+1.4
2,262,890	+		PfGW456L13_2059	0.61	-2.5
2,262,890	+		PfGW456L13_2059	0.61	+4.8
2,262,891	-		PfGW456L13_2059	0.61	+0.4
2,262,950	+		PfGW456L13_2059	0.65	-0.1
2,262,950	+		PfGW456L13_2059	0.65	-2.7
2,262,951	-		PfGW456L13_2059	0.65	-1.1
2,262,951	-		PfGW456L13_2059	0.65	-1.8
2,262,951	-		PfGW456L13_2059	0.65	-0.0
2,262,951	-		PfGW456L13_2059	0.65	+1.3
2,262,951	-		PfGW456L13_2059	0.65	-0.4
2,262,951	-		PfGW456L13_2059	0.65	-2.6
2,263,024	+		PfGW456L13_2059	0.70	-2.5
2,263,024	+		PfGW456L13_2059	0.70	+0.6
2,263,025	-		PfGW456L13_2059	0.70	-2.7
2,263,128	+		PfGW456L13_2059	0.78	+0.4
2,263,128	+		PfGW456L13_2059	0.78	-0.8
2,263,128	+		PfGW456L13_2059	0.78	-0.9
2,263,129	-		PfGW456L13_2059	0.78	-1.4
2,263,129	-		PfGW456L13_2059	0.78	-0.3
2,263,129	-		PfGW456L13_2059	0.78	+1.0
2,263,260	-		PfGW456L13_2059	0.87	+0.5
2,263,260	-		PfGW456L13_2059	0.87	+1.8
2,263,260	-		PfGW456L13_2059	0.87	+1.2
2,263,296	+		PfGW456L13_2059	0.90	-3.1
2,263,296	+		PfGW456L13_2059	0.90	-3.3
2,263,296	+		PfGW456L13_2059	0.90	+1.5
2,263,296	+		PfGW456L13_2059	0.90	-1.2
2,263,296	+		PfGW456L13_2059	0.90	+0.8
2,263,297	-				+0.2
2,263,297	-				+1.4
2,263,297	-				-2.8
2,263,297	-				-2.6
2,263,297	-				-1.0
2,263,297	-				-0.7
2,263,354	+				-2.6
2,263,354	+				+0.7
2,263,355	-				+0.6
2,263,355	-				-1.1
2,263,367	+				-1.9
2,263,367	+				-3.1
2,263,367	+				+0.9
2,263,367	+				-2.0
2,263,367	+				-0.2
2,263,367	+				-3.6
2,263,367	+				+1.5
2,263,367	+				-1.9
2,263,367	+				+0.1
2,263,367	+				-2.9
2,263,367	+				+1.8
2,263,367	+				+0.3
2,263,368	-				-1.3
2,263,368	-				+1.3
2,263,368	-				+0.6
2,263,368	-				+1.2
2,263,368	-				-0.6
2,263,368	-				+1.1
2,263,368	-				+0.0
2,263,368	-				+0.1
2,263,368	-				+1.7
2,263,368	-				-0.3
2,263,368	-				-3.1
2,263,368	-				+0.2
2,263,368	-				-1.4
2,263,368	-				+1.9
2,263,368	-				+0.9
2,263,368	-				-2.5
2,263,368	-				+1.0
2,263,368	-				-0.9
2,263,368	-				+1.2
2,263,368	-				+0.7
2,263,368	-				+1.4
2,263,368	-				+0.2
2,263,368	-				+0.4
2,263,368	-				-1.5
2,263,368	-				-1.8
2,263,464	+				+2.0
2,263,517	-				-3.7
2,263,517	-				+0.4
2,263,536	+				+1.4
2,263,536	+				-1.1
2,263,536	+				-0.9
2,263,536	+				-0.9
2,263,537	-				+0.2
2,263,537	-				+0.8
2,263,537	-				-0.3
2,263,751	+		PfGW456L13_2060	0.11	+1.0
2,263,751	+		PfGW456L13_2060	0.11	+0.3
2,263,751	+		PfGW456L13_2060	0.11	+0.9
2,263,751	+		PfGW456L13_2060	0.11	-0.7
2,263,752	-		PfGW456L13_2060	0.11	+1.2
2,263,995	+		PfGW456L13_2060	0.23	+0.7
2,263,995	+		PfGW456L13_2060	0.23	+1.5
2,263,995	+		PfGW456L13_2060	0.23	-1.3
2,263,995	+		PfGW456L13_2060	0.23	-1.1
2,263,995	+		PfGW456L13_2060	0.23	+1.9
2,263,995	+		PfGW456L13_2060	0.23	-0.3
2,263,995	+		PfGW456L13_2060	0.23	+1.1
2,263,996	-		PfGW456L13_2060	0.23	+1.0
2,263,996	-		PfGW456L13_2060	0.23	+0.7
2,263,996	-		PfGW456L13_2060	0.23	+0.3
2,263,996	-		PfGW456L13_2060	0.23	-1.4
2,263,996	-		PfGW456L13_2060	0.23	-0.2
2,263,996	-		PfGW456L13_2060	0.23	-0.7
2,264,027	+		PfGW456L13_2060	0.25	-3.1
2,264,028	-		PfGW456L13_2060	0.25	+1.2
2,264,028	-		PfGW456L13_2060	0.25	-0.1
2,264,029	+		PfGW456L13_2060	0.25	+0.7
2,264,029	+		PfGW456L13_2060	0.25	-1.5
2,264,030	-		PfGW456L13_2060	0.25	+0.3
2,264,030	-		PfGW456L13_2060	0.25	+0.4
2,264,030	-		PfGW456L13_2060	0.25	+0.3
2,264,030	-		PfGW456L13_2060	0.25	-0.7
2,264,253	-		PfGW456L13_2060	0.36	-1.9
2,264,284	+		PfGW456L13_2060	0.38	+1.9
2,264,284	+		PfGW456L13_2060	0.38	+0.7
2,264,285	-		PfGW456L13_2060	0.38	-1.0
2,264,285	-		PfGW456L13_2060	0.38	+0.4
2,264,316	-		PfGW456L13_2060	0.39	+1.1
2,264,316	-		PfGW456L13_2060	0.39	-2.9
2,264,348	+		PfGW456L13_2060	0.41	+1.4
2,264,349	-		PfGW456L13_2060	0.41	-2.3
2,264,349	-		PfGW456L13_2060	0.41	+0.5
2,264,349	-		PfGW456L13_2060	0.41	+0.7
2,264,402	+		PfGW456L13_2060	0.44	+1.7
2,264,402	+		PfGW456L13_2060	0.44	+0.9
2,264,402	+		PfGW456L13_2060	0.44	+1.8
2,264,403	-		PfGW456L13_2060	0.44	+0.9
2,264,403	-		PfGW456L13_2060	0.44	-2.3
2,264,403	-		PfGW456L13_2060	0.44	-1.3
2,264,403	-		PfGW456L13_2060	0.44	+3.0
2,264,403	-		PfGW456L13_2060	0.44	+1.4
2,264,403	-		PfGW456L13_2060	0.44	-0.3
2,264,403	-		PfGW456L13_2060	0.44	+0.0
2,264,403	-		PfGW456L13_2060	0.44	+0.8
2,264,403	-		PfGW456L13_2060	0.44	-0.2
2,264,403	-		PfGW456L13_2060	0.44	+2.8
2,264,665	+		PfGW456L13_2060	0.57	+1.4
2,264,665	+		PfGW456L13_2060	0.57	-0.1
2,264,665	+		PfGW456L13_2060	0.57	+0.7
2,264,665	+		PfGW456L13_2060	0.57	+1.0
2,264,665	+		PfGW456L13_2060	0.57	+0.3
2,264,666	-		PfGW456L13_2060	0.57	-0.2
2,264,666	-		PfGW456L13_2060	0.57	+0.8
2,264,666	-		PfGW456L13_2060	0.57	+0.1
2,264,666	-				-0.8
2,264,666	-		PfGW456L13_2060	0.57	-0.4
2,264,667	+		PfGW456L13_2060	0.57	+1.5
2,264,667	+		PfGW456L13_2060	0.57	-1.0
2,264,667	+		PfGW456L13_2060	0.57	-0.9
2,264,667	+		PfGW456L13_2060	0.57	+0.6
2,264,667	+		PfGW456L13_2060	0.57	-1.0
2,264,668	-		PfGW456L13_2060	0.57	-0.4
2,264,668	-		PfGW456L13_2060	0.57	-0.9
2,264,668	-		PfGW456L13_2060	0.57	-1.3
2,264,668	-		PfGW456L13_2060	0.57	+0.1
2,264,668	-		PfGW456L13_2060	0.57	-2.3
2,264,668	-		PfGW456L13_2060	0.57	+1.0
2,264,668	-		PfGW456L13_2060	0.57	-0.5
2,264,668	-		PfGW456L13_2060	0.57	+0.8
2,264,668	-		PfGW456L13_2060	0.57	+0.6
2,264,668	-				+0.2
2,264,668	-		PfGW456L13_2060	0.57	-2.8
2,264,668	-		PfGW456L13_2060	0.57	+1.2
2,264,668	-		PfGW456L13_2060	0.57	+1.7
2,264,834	-		PfGW456L13_2060	0.66	+0.3
2,264,985	+		PfGW456L13_2060	0.73	-0.9
2,264,986	-		PfGW456L13_2060	0.73	+1.1
2,264,986	-		PfGW456L13_2060	0.73	+0.1
2,264,986	-		PfGW456L13_2060	0.73	-0.2
2,264,986	-		PfGW456L13_2060	0.73	-1.6
2,265,561	+				+0.1
2,265,561	+				-0.6
2,265,562	-				-1.7
2,265,699	+				-0.7
2,265,699	+				+0.7
2,265,706	+				+0.9
2,265,706	+				+0.5
2,265,706	+				-0.6
2,265,706	+				+0.5
2,265,706	+				+1.1
2,265,706	+				-1.6
2,265,706	+				+2.2
2,265,706	+				+1.6
2,265,707	-				-0.2
2,265,738	+				+0.6
2,265,738	+				-1.9
2,265,738	+				+0.0
2,265,738	+				-0.7
2,265,873	+		PfGW456L13_2061	0.19	+0.1
2,265,873	+		PfGW456L13_2061	0.19	+0.9
2,265,873	+		PfGW456L13_2061	0.19	+0.7
2,265,891	+		PfGW456L13_2061	0.21	+0.5
2,265,891	+		PfGW456L13_2061	0.21	+1.0
2,265,891	+		PfGW456L13_2061	0.21	-2.3
2,265,891	+		PfGW456L13_2061	0.21	+0.2
2,265,891	+		PfGW456L13_2061	0.21	+0.6
2,265,891	+		PfGW456L13_2061	0.21	-0.9
2,265,891	+		PfGW456L13_2061	0.21	-2.3
2,265,892	-		PfGW456L13_2061	0.21	+1.4
2,265,892	-		PfGW456L13_2061	0.21	-2.2
2,265,892	-		PfGW456L13_2061	0.21	+1.2
2,265,892	-		PfGW456L13_2061	0.21	+1.5
2,265,892	-		PfGW456L13_2061	0.21	+1.4
2,265,892	-		PfGW456L13_2061	0.21	+1.4
2,265,922	-		PfGW456L13_2061	0.25	+0.7
2,266,130	+		PfGW456L13_2061	0.53	+0.2
2,266,130	+		PfGW456L13_2061	0.53	+0.2
2,266,130	+		PfGW456L13_2061	0.53	-2.0
2,266,130	+		PfGW456L13_2061	0.53	+2.0
2,266,130	+		PfGW456L13_2061	0.53	-3.0
2,266,130	+		PfGW456L13_2061	0.53	-0.3
2,266,130	+		PfGW456L13_2061	0.53	-3.8
2,266,130	+		PfGW456L13_2061	0.53	-0.6
2,266,130	+		PfGW456L13_2061	0.53	-0.2
2,266,130	+		PfGW456L13_2061	0.53	-1.5
2,266,130	+		PfGW456L13_2061	0.53	+1.7
2,266,131	-		PfGW456L13_2061	0.53	-0.2
2,266,131	-		PfGW456L13_2061	0.53	+0.6
2,266,131	-		PfGW456L13_2061	0.53	-0.1
2,266,131	-		PfGW456L13_2061	0.53	-0.5
2,266,131	-		PfGW456L13_2061	0.53	+0.7
2,266,131	-		PfGW456L13_2061	0.53	+0.5
2,266,131	-		PfGW456L13_2061	0.53	+1.4
2,266,131	-		PfGW456L13_2061	0.53	-0.3
2,266,437	+				-2.7
2,266,437	+				+2.0
2,266,438	-				-2.1
2,266,469	+				-0.6
2,266,475	+				-1.9
2,266,476	-				-1.2
2,266,476	-				+0.7