Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1823

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,008,461	-		PfGW456L13_1822	0.33	+1.3
2,008,542	-		PfGW456L13_1822	0.44	+1.3
2,008,694	+		PfGW456L13_1822	0.65	+1.5
2,008,694	+		PfGW456L13_1822	0.65	+0.4
2,008,694	+		PfGW456L13_1822	0.65	-0.6
2,008,694	+		PfGW456L13_1822	0.65	+2.0
2,008,694	+		PfGW456L13_1822	0.65	+0.2
2,008,695	-		PfGW456L13_1822	0.65	-1.5
2,008,695	-		PfGW456L13_1822	0.65	+0.9
2,008,695	-		PfGW456L13_1822	0.65	-2.7
2,008,695	-		PfGW456L13_1822	0.65	-0.8
2,008,795	+		PfGW456L13_1822	0.79	-3.6
2,008,970	+				+2.6
2,008,971	-				+0.6
2,008,984	+				+0.9
2,008,984	+				-4.3
2,008,985	-				-1.5
2,008,998	+				-3.4
2,008,998	+				-1.2
2,008,999	-				-0.9
2,008,999	-				-0.2
2,008,999	-				-2.3
2,009,006	+				-0.8
2,009,006	+				+0.3
2,009,038	+				-1.1
2,009,038	+				+0.6
2,009,038	+				+0.6
2,009,038	+				+0.9
2,009,038	+				+2.2
2,009,038	+				-3.3
2,009,038	+				+0.6
2,009,038	+				-1.5
2,009,038	+				+0.3
2,009,038	+				-1.3
2,009,038	+				-3.0
2,009,038	+				+1.0
2,009,038	+				+0.2
2,009,038	+				-0.7
2,009,038	+				-1.0
2,009,038	+				+1.7
2,009,038	+				-0.2
2,009,038	+				-0.1
2,009,038	+				+2.4
2,009,038	+				+2.5
2,009,038	+				-0.8
2,009,042	+				+1.9
2,009,042	+				+0.9
2,009,042	+				+1.0
2,009,042	+				-1.3
2,009,042	+				-0.9
2,009,042	+				-0.2
2,009,042	+				+0.8
2,009,042	+				+0.6
2,009,042	+				+1.4
2,009,042	+				+0.4
2,009,042	+				+1.2
2,009,042	+				-2.6
2,009,042	+				-1.8
2,009,042	+				+0.1
2,009,042	+				+2.7
2,009,042	+				-2.2
2,009,043	-				+2.2
2,009,043	-				-1.8
2,009,087	+				-1.6
2,009,088	-				-2.7
2,009,114	+				+0.6
2,009,166	+				-2.3
2,009,166	+				-0.5
2,009,172	+				-3.3
2,009,430	+		PfGW456L13_1823	0.20	-3.0
2,009,430	+		PfGW456L13_1823	0.20	+0.7
2,009,430	+		PfGW456L13_1823	0.20	-1.8
2,009,430	+		PfGW456L13_1823	0.20	-3.0
2,009,430	+		PfGW456L13_1823	0.20	-0.2
2,009,430	+		PfGW456L13_1823	0.20	+1.4
2,009,430	+		PfGW456L13_1823	0.20	-3.5
2,009,431	-		PfGW456L13_1823	0.20	-0.3
2,009,431	-		PfGW456L13_1823	0.20	+1.7
2,009,432	+		PfGW456L13_1823	0.20	-3.2
2,009,433	-		PfGW456L13_1823	0.20	+0.8
2,009,433	-		PfGW456L13_1823	0.20	-2.3
2,009,433	-		PfGW456L13_1823	0.20	-3.1
2,009,466	+		PfGW456L13_1823	0.22	+0.7
2,009,467	-		PfGW456L13_1823	0.22	+0.1
2,009,536	+		PfGW456L13_1823	0.27	+0.4
2,009,536	+		PfGW456L13_1823	0.27	-3.4
2,009,536	+		PfGW456L13_1823	0.27	-2.1
2,009,537	-		PfGW456L13_1823	0.27	+1.8
2,009,537	-		PfGW456L13_1823	0.27	+2.3
2,009,537	-		PfGW456L13_1823	0.27	-0.0
2,009,559	+		PfGW456L13_1823	0.29	-3.0
2,009,559	+		PfGW456L13_1823	0.29	-1.0
2,009,740	-		PfGW456L13_1823	0.41	+0.9
2,009,788	+		PfGW456L13_1823	0.45	-1.8
2,009,789	-		PfGW456L13_1823	0.45	-1.6
2,009,844	+		PfGW456L13_1823	0.49	-1.4
2,009,844	+		PfGW456L13_1823	0.49	-0.6
2,009,844	+		PfGW456L13_1823	0.49	-0.5
2,009,844	+		PfGW456L13_1823	0.49	-0.8
2,009,844	+		PfGW456L13_1823	0.49	+0.6
2,009,844	+		PfGW456L13_1823	0.49	+0.9
2,009,844	+		PfGW456L13_1823	0.49	-3.6
2,009,844	+		PfGW456L13_1823	0.49	-3.3
2,009,844	+		PfGW456L13_1823	0.49	+1.3
2,009,844	+		PfGW456L13_1823	0.49	+1.3
2,009,844	+		PfGW456L13_1823	0.49	-0.2
2,009,844	+		PfGW456L13_1823	0.49	-1.2
2,009,845	-		PfGW456L13_1823	0.49	+1.7
2,009,845	-		PfGW456L13_1823	0.49	-0.2
2,009,845	-		PfGW456L13_1823	0.49	-1.2
2,009,845	-		PfGW456L13_1823	0.49	+0.8
2,009,845	-		PfGW456L13_1823	0.49	-0.6
2,009,845	-		PfGW456L13_1823	0.49	+1.6
2,009,845	-		PfGW456L13_1823	0.49	+0.8
2,009,845	-		PfGW456L13_1823	0.49	+0.3
2,009,845	-		PfGW456L13_1823	0.49	+0.3
2,009,845	-		PfGW456L13_1823	0.49	-2.7
2,009,845	-		PfGW456L13_1823	0.49	-1.2
2,009,845	-		PfGW456L13_1823	0.49	-0.5
2,009,970	+		PfGW456L13_1823	0.57	-0.1
2,009,970	+		PfGW456L13_1823	0.57	+0.5
2,009,970	+		PfGW456L13_1823	0.57	+1.7
2,009,970	+		PfGW456L13_1823	0.57	-3.0
2,009,970	+		PfGW456L13_1823	0.57	-0.0
2,009,970	+		PfGW456L13_1823	0.57	-0.4
2,009,970	+		PfGW456L13_1823	0.57	-0.4
2,009,970	+		PfGW456L13_1823	0.57	-0.8
2,009,971	-		PfGW456L13_1823	0.58	+1.9
2,009,971	-		PfGW456L13_1823	0.58	+0.1
2,009,971	-		PfGW456L13_1823	0.58	-2.7
2,009,971	-		PfGW456L13_1823	0.58	-1.5
2,009,971	-		PfGW456L13_1823	0.58	-2.1
2,009,971	-		PfGW456L13_1823	0.58	+0.7
2,009,971	-		PfGW456L13_1823	0.58	+0.7
2,009,971	-		PfGW456L13_1823	0.58	-3.0
2,009,972	+		PfGW456L13_1823	0.58	-2.7
2,010,111	+		PfGW456L13_1823	0.67	-0.0
2,010,111	+		PfGW456L13_1823	0.67	-0.3
2,010,111	+		PfGW456L13_1823	0.67	+0.0
2,010,111	+		PfGW456L13_1823	0.67	+0.8
2,010,111	+		PfGW456L13_1823	0.67	+1.5
2,010,112	-		PfGW456L13_1823	0.67	-1.9
2,010,178	-		PfGW456L13_1823	0.72	-1.6
2,010,223	+		PfGW456L13_1823	0.75	-0.3
2,010,223	+		PfGW456L13_1823	0.75	-3.5
2,010,224	-		PfGW456L13_1823	0.75	+3.8
2,010,225	+		PfGW456L13_1823	0.75	-1.6
2,010,225	+		PfGW456L13_1823	0.75	-0.3
2,010,225	+		PfGW456L13_1823	0.75	-1.1
2,010,225	+		PfGW456L13_1823	0.75	+0.8
2,010,225	+		PfGW456L13_1823	0.75	+1.4
2,010,225	+		PfGW456L13_1823	0.75	+0.8
2,010,225	+		PfGW456L13_1823	0.75	+1.3
2,010,226	-		PfGW456L13_1823	0.75	+1.6
2,010,237	-		PfGW456L13_1823	0.76	-2.4
2,010,455	+				-0.2
2,010,497	+				+0.5
2,010,503	+				-2.2
2,010,543	+				+0.1
2,010,544	-				-0.5
2,010,611	+				+0.4
2,010,612	-				-2.3
2,010,612	-				-1.8
2,010,799	-		PfGW456L13_1824	0.32	-1.0
2,011,016	-		PfGW456L13_1824	0.90	+1.2
2,011,016	-		PfGW456L13_1824	0.90	-0.0
2,011,062	-				-1.6
2,011,066	+				-1.5
2,011,066	+				+2.6
2,011,067	-				-2.9
2,011,067	-				+1.2
2,011,067	-				+0.2
2,011,067	-				-0.6
2,011,067	-				+0.4
2,011,067	-				-2.9
2,011,104	-				+0.9
2,011,106	+				+0.0
2,011,127	+				+0.9
2,011,128	-				+1.0
2,011,135	+				+1.4
2,011,183	+				-2.3
2,011,192	+				-3.0
2,011,193	-				-2.5
2,011,219	-				-1.5
2,011,219	-				-0.5
2,011,219	-				+0.1
2,011,220	+				-3.0
2,011,221	-				-1.2
2,011,224	+				-2.0
2,011,230	-				-1.2
2,011,326	+				-1.1
2,011,327	-				+1.4
2,011,327	-				-2.1
2,011,327	-				-0.6