Strain Fitness in Pseudomonas sp. RS175 around PFR28_04886

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
5,579,339	+		PFR28_04884	0.76	-0.0
5,579,339	+		PFR28_04884	0.76	-1.2
5,579,339	+		PFR28_04884	0.76	+0.8
5,579,339	+		PFR28_04884	0.76	-0.9
5,579,357	+		PFR28_04884	0.80	-0.2
5,579,357	+		PFR28_04884	0.80	+0.8
5,579,358	-		PFR28_04884	0.80	-1.2
5,579,381	-		PFR28_04884	0.86	+0.3
5,579,381	-		PFR28_04884	0.86	-0.6
5,579,412	-				-1.9
5,579,412	-				+0.9
5,579,412	-				+0.4
5,579,441	+				+1.0
5,579,441	+				+0.4
5,579,441	+				+0.1
5,579,441	+				+0.4
5,579,441	+				+0.0
5,579,441	+				-0.1
5,579,442	-				+1.2
5,579,444	+				+0.2
5,579,490	+				+1.7
5,579,490	+				-0.7
5,579,490	+				+0.8
5,579,490	+				-1.8
5,579,490	+				+0.2
5,579,490	+				-0.2
5,579,491	-				+0.3
5,579,491	-				-0.1
5,579,491	-				-0.7
5,579,491	-				-0.7
5,579,583	+		PFR28_04885	0.14	+0.3
5,579,583	+		PFR28_04885	0.14	-0.5
5,579,584	-		PFR28_04885	0.15	+0.1
5,579,616	+		PFR28_04885	0.19	-0.0
5,579,616	+		PFR28_04885	0.19	+0.9
5,579,616	+		PFR28_04885	0.19	-1.2
5,579,616	+		PFR28_04885	0.19	-0.6
5,579,616	+		PFR28_04885	0.19	+0.4
5,579,616	+		PFR28_04885	0.19	+0.7
5,579,617	-		PFR28_04885	0.20	+0.2
5,579,617	-		PFR28_04885	0.20	-1.2
5,579,617	-		PFR28_04885	0.20	-0.6
5,579,619	+		PFR28_04885	0.20	+0.3
5,579,620	-		PFR28_04885	0.20	+1.2
5,579,719	+		PFR28_04885	0.35	+0.6
5,579,719	+		PFR28_04885	0.35	-2.0
5,579,720	-		PFR28_04885	0.35	-1.3
5,579,720	-		PFR28_04885	0.35	+0.5
5,579,749	+		PFR28_04885	0.40	+0.7
5,579,749	+		PFR28_04885	0.40	+0.1
5,579,765	+		PFR28_04885	0.42	+1.2
5,579,765	+		PFR28_04885	0.42	+0.4
5,579,765	+		PFR28_04885	0.42	+0.0
5,579,765	+		PFR28_04885	0.42	-1.6
5,579,807	+		PFR28_04885	0.48	+0.1
5,579,808	-		PFR28_04885	0.48	+0.6
5,579,950	+		PFR28_04885	0.70	-1.6
5,579,950	+		PFR28_04885	0.70	+1.1
5,579,951	-		PFR28_04885	0.70	+0.3
5,579,951	-		PFR28_04885	0.70	-0.3
5,580,076	+		PFR28_04885	0.89	-0.9
5,580,076	+		PFR28_04885	0.89	-1.3
5,580,076	+		PFR28_04885	0.89	-0.0
5,580,077	-		PFR28_04885	0.89	+1.2
5,580,077	-		PFR28_04885	0.89	-1.8
5,580,077	-		PFR28_04885	0.89	-0.1
5,580,077	-		PFR28_04885	0.89	-0.9
5,580,119	+				+0.8
5,580,149	+				-0.0
5,580,149	+				-1.1
5,580,150	-				+0.5
5,580,196	+				-2.2
5,580,196	+				-1.1
5,580,196	+				-1.4
5,580,196	+				+0.4
5,580,196	+				+0.1
5,580,196	+				-1.4
5,580,197	-				-0.3
5,580,197	-				-0.6
5,580,205	+				-0.2
5,580,205	+				-0.6
5,580,205	+				+1.7
5,580,206	-				+0.4
5,580,206	-				+0.0
5,580,207	+				-0.5
5,580,207	+				-1.1
5,580,207	+				+0.1
5,580,207	+				+0.1
5,580,207	+				+0.1
5,580,207	+				-2.3
5,580,207	+				-1.1
5,580,207	+				-1.4
5,580,207	+				-0.9
5,580,207	+				+0.0
5,580,207	+				-0.7
5,580,207	+				-1.3
5,580,207	+				-0.3
5,580,207	+				-0.5
5,580,207	+				-1.0
5,580,207	+				+0.7
5,580,207	+				+0.1
5,580,208	-				-2.6
5,580,208	-				+0.2
5,580,208	-				+4.9
5,580,208	-				-0.6
5,580,208	-				-1.5
5,580,208	-				-0.3
5,580,208	-				+0.5
5,580,208	-				+0.4
5,580,208	-				-1.8
5,580,208	-				+0.2
5,580,208	-				+1.3
5,580,208	-				-0.3
5,580,210	+				+0.3
5,580,210	+				-0.6
5,580,210	+				-0.3
5,580,211	-				+0.4
5,580,211	-				-0.8
5,580,211	-				+0.9
5,580,237	+				-1.1
5,580,257	+				-0.5
5,580,257	+				+1.5
5,580,257	+				-0.1
5,580,257	+				+1.2
5,580,258	-				+0.5
5,580,343	+		PFR28_04886	0.19	-0.0
5,580,343	+		PFR28_04886	0.19	-0.8
5,580,343	+		PFR28_04886	0.19	-0.6
5,580,344	-		PFR28_04886	0.19	+1.8
5,580,344	-		PFR28_04886	0.19	+2.7
5,580,344	-		PFR28_04886	0.19	+0.3
5,580,344	-		PFR28_04886	0.19	+1.1
5,580,344	-		PFR28_04886	0.19	+1.5
5,580,344	-		PFR28_04886	0.19	+2.2
5,580,433	+		PFR28_04886	0.34	+0.6
5,580,433	+		PFR28_04886	0.34	+1.2
5,580,433	+		PFR28_04886	0.34	+0.1
5,580,433	+		PFR28_04886	0.34	-0.3
5,580,433	+		PFR28_04886	0.34	+0.2
5,580,433	+		PFR28_04886	0.34	-0.8
5,580,433	+		PFR28_04886	0.34	+0.5
5,580,434	-		PFR28_04886	0.35	+0.5
5,580,434	-		PFR28_04886	0.35	+0.7
5,580,434	-		PFR28_04886	0.35	+0.3
5,580,434	-		PFR28_04886	0.35	+1.2
5,580,434	-		PFR28_04886	0.35	+0.4
5,580,434	-		PFR28_04886	0.35	+1.2
5,580,454	+		PFR28_04886	0.38	+0.5
5,580,454	+		PFR28_04886	0.38	+0.3
5,580,592	+		PFR28_04886	0.62	-0.8
5,580,593	-		PFR28_04886	0.63	+1.8
5,580,757	+				-0.5
5,580,757	+				-0.2
5,580,757	+				+0.4
5,580,758	-				+1.2
5,580,758	-				+0.2
5,580,758	-				+0.8
5,580,807	+				+1.3
5,580,807	+				+2.0
5,580,808	-				+1.1
5,580,808	-				+1.1
5,580,808	-				+1.2
5,580,808	-				-0.3
5,581,185	+		PFR28_04887	0.46	+0.6
5,581,185	+		PFR28_04887	0.46	-0.2
5,581,186	-		PFR28_04887	0.46	-2.3
5,581,283	+		PFR28_04887	0.58	+0.8
5,581,307	+		PFR28_04887	0.61	+0.9
5,581,428	+		PFR28_04887	0.76	+1.1
5,581,429	-		PFR28_04887	0.76	-0.0
5,581,719	+				+0.7
5,581,775	+				-0.6
5,581,775	+				-1.1
5,581,775	+				-0.1
5,581,775	+				-1.3
5,581,775	+				-0.1
5,581,775	+				+0.5
5,581,775	+				+0.1
5,581,775	+				+0.4
5,581,775	+				+0.3
5,581,775	+				-0.2
5,581,775	+				+0.1
5,581,776	-				+0.3