Strain Fitness in Pseudomonas sp. RS175 around PFR28_03137

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
3,641,153	+				-0.1
3,641,172	+				+1.9
3,641,173	-				-0.4
3,641,222	+				-1.6
3,641,234	+				+1.0
3,641,501	+		PFR28_03136	0.63	-1.8
3,641,501	+		PFR28_03136	0.63	-1.5
3,641,501	+		PFR28_03136	0.63	-0.7
3,641,502	-		PFR28_03136	0.64	-0.2
3,641,633	+				+0.0
3,641,634	-				-1.3
3,641,745	-				+0.1
3,641,745	-				-0.7
3,641,745	-				+0.0
3,641,788	+				+0.5
3,641,788	+				-0.9
3,641,788	+				-0.9
3,641,788	+				-0.5
3,641,788	+				+0.5
3,641,788	+				-0.4
3,641,789	-				-0.5
3,641,789	-				-0.0
3,641,789	-				-0.1
3,641,789	-				-0.4
3,641,790	+				+0.4
3,641,790	+				+1.1
3,641,790	+				-0.8
3,641,790	+				+0.7
3,641,790	+				+0.0
3,641,790	+				+1.0
3,641,790	+				-0.5
3,641,790	+				+0.0
3,641,791	-				-0.7
3,641,791	-				-0.0
3,641,791	-				-1.7
3,641,912	+				-0.9
3,641,913	-				-0.6
3,641,913	-				-1.5
3,641,962	+				-0.5
3,641,984	+				-1.4
3,641,985	-				-1.6
3,642,024	-				+0.2
3,642,024	-				-0.7
3,642,024	-				+0.4
3,642,024	-				+0.1
3,642,041	+				-1.5
3,642,142	+		PFR28_03137	0.11	-0.8
3,642,142	+		PFR28_03137	0.11	+0.4
3,642,142	+		PFR28_03137	0.11	+0.7
3,642,142	+		PFR28_03137	0.11	-0.2
3,642,142	+		PFR28_03137	0.11	+1.7
3,642,142	+		PFR28_03137	0.11	+0.1
3,642,142	+		PFR28_03137	0.11	-0.0
3,642,142	+		PFR28_03137	0.11	-0.1
3,642,142	+		PFR28_03137	0.11	-0.2
3,642,142	+		PFR28_03137	0.11	+0.5
3,642,142	+		PFR28_03137	0.11	-0.3
3,642,142	+		PFR28_03137	0.11	-0.5
3,642,142	+		PFR28_03137	0.11	+0.0
3,642,142	+		PFR28_03137	0.11	-0.5
3,642,142	+		PFR28_03137	0.11	+0.8
3,642,142	+		PFR28_03137	0.11	-0.1
3,642,142	+		PFR28_03137	0.11	-0.6
3,642,142	+		PFR28_03137	0.11	-0.0
3,642,143	-		PFR28_03137	0.11	+0.1
3,642,143	-		PFR28_03137	0.11	+0.2
3,642,143	-		PFR28_03137	0.11	-1.4
3,642,143	-		PFR28_03137	0.11	+0.2
3,642,143	-		PFR28_03137	0.11	+0.5
3,642,143	-		PFR28_03137	0.11	-0.0
3,642,143	-		PFR28_03137	0.11	+0.5
3,642,143	-		PFR28_03137	0.11	+2.9
3,642,143	-		PFR28_03137	0.11	-1.3
3,642,143	-		PFR28_03137	0.11	+0.0
3,642,143	-		PFR28_03137	0.11	+0.5
3,642,143	-		PFR28_03137	0.11	-0.1
3,642,143	-		PFR28_03137	0.11	-1.1
3,642,143	-		PFR28_03137	0.11	-0.7
3,642,143	-		PFR28_03137	0.11	+0.8
3,642,143	-		PFR28_03137	0.11	+1.0
3,642,143	-		PFR28_03137	0.11	-0.5
3,642,144	+		PFR28_03137	0.11	+0.1
3,642,144	+		PFR28_03137	0.11	-0.8
3,642,144	+		PFR28_03137	0.11	+0.5
3,642,145	-		PFR28_03137	0.11	-1.2
3,642,145	-		PFR28_03137	0.11	-0.2
3,642,145	-		PFR28_03137	0.11	+0.1
3,642,253	+		PFR28_03137	0.19	-0.9
3,642,310	+		PFR28_03137	0.24	+0.5
3,642,310	+		PFR28_03137	0.24	-0.3
3,642,310	+		PFR28_03137	0.24	-1.0
3,642,310	+		PFR28_03137	0.24	-1.2
3,642,311	-		PFR28_03137	0.24	+0.2
3,642,311	-		PFR28_03137	0.24	-0.7
3,642,311	-		PFR28_03137	0.24	-2.1
3,642,311	-		PFR28_03137	0.24	-0.4
3,642,311	-		PFR28_03137	0.24	+0.1
3,642,335	-		PFR28_03137	0.25	-0.6
3,642,335	-		PFR28_03137	0.25	+0.5
3,642,335	-		PFR28_03137	0.25	+0.2
3,642,610	+		PFR28_03137	0.46	-0.1
3,642,611	-		PFR28_03137	0.46	-0.6
3,642,611	-		PFR28_03137	0.46	+0.0
3,642,688	+		PFR28_03137	0.52	-0.4
3,642,688	+		PFR28_03137	0.52	+0.0
3,642,688	+		PFR28_03137	0.52	+0.6
3,642,688	+		PFR28_03137	0.52	-0.7
3,642,768	+		PFR28_03137	0.57	+0.1
3,642,768	+		PFR28_03137	0.57	+0.9
3,642,768	+		PFR28_03137	0.57	-0.6
3,642,768	+		PFR28_03137	0.57	-1.0
3,642,769	-		PFR28_03137	0.58	-1.5
3,642,769	-		PFR28_03137	0.58	+0.3
3,642,769	-		PFR28_03137	0.58	-0.4
3,642,920	+		PFR28_03137	0.69	-0.8
3,642,920	+		PFR28_03137	0.69	-0.8
3,642,921	-		PFR28_03137	0.69	-0.4
3,642,921	-		PFR28_03137	0.69	-1.2
3,642,921	-		PFR28_03137	0.69	+1.3
3,642,921	-		PFR28_03137	0.69	+0.1
3,642,921	-		PFR28_03137	0.69	-0.6
3,642,958	+		PFR28_03137	0.72	-0.6
3,642,958	+		PFR28_03137	0.72	+0.3
3,642,958	+		PFR28_03137	0.72	-0.9
3,642,959	-		PFR28_03137	0.72	+1.1
3,642,959	-		PFR28_03137	0.72	-0.9
3,643,028	+		PFR28_03137	0.77	-0.3
3,643,028	+		PFR28_03137	0.77	+1.1
3,643,028	+		PFR28_03137	0.77	-1.1
3,643,028	+		PFR28_03137	0.77	+0.8
3,643,029	-		PFR28_03137	0.77	+0.5
3,643,029	-		PFR28_03137	0.77	-0.0
3,643,029	-		PFR28_03137	0.77	+0.2
3,643,029	-		PFR28_03137	0.77	+1.0
3,643,102	+		PFR28_03137	0.82	+0.4
3,643,102	+		PFR28_03137	0.82	-2.7
3,643,102	+		PFR28_03137	0.82	+0.3
3,643,102	+		PFR28_03137	0.82	-1.1
3,643,102	+		PFR28_03137	0.82	-0.5
3,643,102	+		PFR28_03137	0.82	-0.5
3,643,102	+		PFR28_03137	0.82	-0.0
3,643,103	-		PFR28_03137	0.82	+0.0
3,643,103	-		PFR28_03137	0.82	+1.0
3,643,103	-		PFR28_03137	0.82	+0.2
3,643,103	-		PFR28_03137	0.82	+0.3
3,643,103	-		PFR28_03137	0.82	-1.2
3,643,103	-		PFR28_03137	0.82	-1.7
3,643,243	+				-0.4
3,643,243	+				-0.1
3,643,243	+				-0.5
3,643,243	+				+0.5
3,643,243	+				+0.6
3,643,243	+				-0.4
3,643,243	+				+0.3
3,643,243	+				+1.4
3,643,243	+				+0.7
3,643,243	+				+0.0
3,643,243	+				+1.0
3,643,243	+				-0.5
3,643,243	+				-0.2
3,643,243	+				-0.2
3,643,243	+				-1.4
3,643,244	-				-0.3
3,643,244	-				-0.1
3,643,244	-				+0.7
3,643,244	-				-0.3
3,643,244	-				+0.4
3,643,244	-				-0.9
3,643,244	-				+0.4
3,643,244	-				+0.3
3,643,244	-				-0.4
3,643,244	-				-0.9
3,643,244	-				-0.1
3,643,244	-				+0.5
3,643,244	-				-0.2
3,643,244	-				-1.0
3,643,244	-				+0.7
3,643,244	-				-1.4
3,643,244	-				+0.2
3,643,346	+				+0.3
3,643,346	+				+0.2
3,643,347	-				-0.7
3,643,347	-				+0.5
3,643,388	+				-0.2
3,643,388	+				-0.3
3,643,388	+				+0.8
3,643,388	+				+0.0
3,643,388	+				-0.0
3,643,388	+				+0.5
3,643,389	-				-2.6
3,643,389	-				-1.2
3,643,389	-				+2.4
3,643,389	-				+0.7
3,643,389	-				-0.4
3,643,389	-				-2.5
3,643,391	-				+0.2
3,643,391	-				-0.8
3,643,505	+		PFR28_03138	0.16	-0.7
3,643,505	+		PFR28_03138	0.16	-0.5
3,643,505	+		PFR28_03138	0.16	+0.4
3,643,505	+		PFR28_03138	0.16	+0.8
3,643,506	-		PFR28_03138	0.16	+0.3
3,643,506	-		PFR28_03138	0.16	-1.9
3,643,506	-		PFR28_03138	0.16	-0.6
3,643,506	-		PFR28_03138	0.16	+0.6
3,643,506	-		PFR28_03138	0.16	-1.5
3,643,506	-		PFR28_03138	0.16	+1.0
3,643,555	+		PFR28_03138	0.24	+0.1
3,643,555	+		PFR28_03138	0.24	-0.6
3,643,556	-		PFR28_03138	0.24	+0.5
3,643,556	-		PFR28_03138	0.24	+0.1
3,643,649	+		PFR28_03138	0.39	+0.4
3,643,649	+		PFR28_03138	0.39	-1.1
3,643,650	-		PFR28_03138	0.39	+1.4
3,643,650	-		PFR28_03138	0.39	+0.1
3,643,650	-		PFR28_03138	0.39	+0.8
3,643,650	-		PFR28_03138	0.39	+0.0
3,643,650	-		PFR28_03138	0.39	+0.3
3,643,650	-		PFR28_03138	0.39	-1.2
3,643,658	+		PFR28_03138	0.40	+0.2
3,643,658	+		PFR28_03138	0.40	+0.0
3,643,658	+		PFR28_03138	0.40	+0.2
3,643,941	-		PFR28_03138	0.85	-0.3
3,643,941	-		PFR28_03138	0.85	+0.4
3,644,036	+				-2.2
3,644,037	-				+1.3
3,644,047	+				+0.4
3,644,085	+				-0.4
3,644,086	-				+0.8
3,644,117	-				-0.4
3,644,117	-				-0.6
3,644,152	-				-1.0
3,644,281	+				+1.2
3,644,295	+				+0.3
3,644,338	+				-0.5