Strain Fitness in Pseudomonas sp. RS175 around PFR28_03110

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
3,614,881	+		PFR28_03108	0.81	-0.4
3,614,881	+		PFR28_03108	0.81	-0.2
3,614,882	-		PFR28_03108	0.81	-0.7
3,614,882	-		PFR28_03108	0.81	-0.3
3,614,944	+				-0.4
3,615,057	+				+1.0
3,615,058	-				-0.2
3,615,058	-				+1.0
3,615,064	+				+0.7
3,615,064	+				+1.2
3,615,064	+				+0.0
3,615,064	+				-0.5
3,615,064	+				+0.3
3,615,064	+				-1.0
3,615,064	+				-1.1
3,615,064	+				-0.1
3,615,064	+				+0.4
3,615,064	+				+3.0
3,615,064	+				+1.6
3,615,064	+				-0.1
3,615,064	+				-0.4
3,615,064	+				-1.5
3,615,064	+				-0.3
3,615,064	+				+0.6
3,615,065	-				+0.2
3,615,065	-				-0.6
3,615,065	-				+0.6
3,615,065	-				+0.1
3,615,065	-				-0.4
3,615,065	-				-0.9
3,615,065	-				+0.1
3,615,065	-				+0.4
3,615,065	-				-2.0
3,615,065	-				-1.1
3,615,065	-				+1.4
3,615,065	-				+0.6
3,615,065	-				-0.3
3,615,065	-				+2.6
3,615,065	-				+1.4
3,615,065	-				+0.1
3,615,065	-				-0.4
3,615,065	-				+0.2
3,615,065	-				+1.9
3,615,065	-				+0.0
3,615,545	-				-2.0
3,615,785	+				-0.6
3,615,785	+				-1.1
3,615,785	+				+0.1
3,615,785	+				-0.9
3,615,785	+				+0.2
3,615,785	+				-0.4
3,615,785	+				-0.1
3,615,785	+				+0.6
3,615,785	+				-0.5
3,615,785	+				+0.3
3,615,785	+				-0.0
3,615,786	-				-3.3
3,615,786	-				-2.5
3,615,786	-				-0.5
3,615,786	-				-3.4
3,615,786	-				-1.1
3,615,786	-				-1.3
3,615,786	-				-1.8
3,615,786	-				-2.1
3,615,941	+				-3.4
3,615,942	-				-0.5
3,616,053	+		PFR28_03110	0.12	-1.3
3,616,053	+		PFR28_03110	0.12	-0.8
3,616,053	+		PFR28_03110	0.12	-1.2
3,616,053	+		PFR28_03110	0.12	-2.4
3,616,053	+		PFR28_03110	0.12	-2.0
3,616,053	+		PFR28_03110	0.12	+0.5
3,616,054	-		PFR28_03110	0.12	-0.7
3,616,054	-		PFR28_03110	0.12	-1.8
3,616,054	-		PFR28_03110	0.12	-2.8
3,616,064	-		PFR28_03110	0.12	-2.5
3,616,103	+		PFR28_03110	0.15	-1.8
3,616,103	+		PFR28_03110	0.15	-1.0
3,616,104	-		PFR28_03110	0.15	-2.8
3,616,262	+		PFR28_03110	0.24	+1.0
3,616,262	+		PFR28_03110	0.24	-2.1
3,616,262	+		PFR28_03110	0.24	-1.9
3,616,262	+		PFR28_03110	0.24	-3.9
3,616,263	-		PFR28_03110	0.24	-1.6
3,616,549	+		PFR28_03110	0.40	-1.6
3,616,715	+		PFR28_03110	0.49	-4.3
3,616,716	-		PFR28_03110	0.49	-1.2
3,616,716	-		PFR28_03110	0.49	-1.3
3,616,716	-		PFR28_03110	0.49	-0.1
3,616,967	+		PFR28_03110	0.63	-2.3
3,616,967	+		PFR28_03110	0.63	-2.6
3,616,968	-		PFR28_03110	0.63	-1.4
3,616,968	-		PFR28_03110	0.63	-2.8
3,616,968	-		PFR28_03110	0.63	-1.2
3,616,968	-		PFR28_03110	0.63	-1.9
3,617,006	+		PFR28_03110	0.66	+0.1
3,617,006	+		PFR28_03110	0.66	+0.1
3,617,006	+		PFR28_03110	0.66	-4.0
3,617,006	+		PFR28_03110	0.66	-3.6
3,617,006	+		PFR28_03110	0.66	-1.9
3,617,006	+		PFR28_03110	0.66	-1.4
3,617,006	+		PFR28_03110	0.66	-1.3
3,617,006	+		PFR28_03110	0.66	-0.5
3,617,007	-		PFR28_03110	0.66	-1.7
3,617,007	-		PFR28_03110	0.66	-2.7
3,617,007	-		PFR28_03110	0.66	-2.3
3,617,007	-		PFR28_03110	0.66	-2.6
3,617,007	-		PFR28_03110	0.66	-2.4
3,617,007	-		PFR28_03110	0.66	+0.0
3,617,007	-		PFR28_03110	0.66	-1.4
3,617,060	+		PFR28_03110	0.69	-2.3
3,617,060	+		PFR28_03110	0.69	-3.1
3,617,060	+		PFR28_03110	0.69	-3.6
3,617,060	+		PFR28_03110	0.69	-2.9
3,617,060	+		PFR28_03110	0.69	-0.0
3,617,060	+		PFR28_03110	0.69	-1.8
3,617,060	+		PFR28_03110	0.69	-2.2
3,617,061	-		PFR28_03110	0.69	-0.4
3,617,061	-		PFR28_03110	0.69	-3.6
3,617,061	-		PFR28_03110	0.69	-2.1
3,617,061	-		PFR28_03110	0.69	-2.2
3,617,061	-		PFR28_03110	0.69	-2.7
3,617,061	-		PFR28_03110	0.69	-1.8
3,617,061	-		PFR28_03110	0.69	-2.5
3,617,180	+		PFR28_03110	0.75	-1.4
3,617,180	+		PFR28_03110	0.75	-2.8
3,617,181	-		PFR28_03110	0.75	-1.3
3,617,237	+		PFR28_03110	0.79	-1.4
3,617,237	+		PFR28_03110	0.79	-0.6
3,617,237	+		PFR28_03110	0.79	-1.7
3,617,237	+		PFR28_03110	0.79	-2.1
3,617,238	-		PFR28_03110	0.79	-2.0
3,617,238	-		PFR28_03110	0.79	-2.1
3,617,264	+		PFR28_03110	0.80	-3.2
3,617,309	+		PFR28_03110	0.83	-1.7
3,617,309	+		PFR28_03110	0.83	+0.0
3,617,310	-		PFR28_03110	0.83	-2.9
3,617,521	+				-3.2
3,617,522	-				-3.9
3,617,732	+				-0.7
3,617,732	+				-2.6
3,617,733	-				-2.8
3,617,733	-				-2.4
3,617,733	-				-0.5
3,617,736	+				-1.0
3,617,736	+				+1.3
3,617,736	+				-0.6
3,617,736	+				-0.4
3,617,737	-				-2.4
3,617,737	-				-1.0
3,617,737	-				-2.2
3,617,789	+				-3.7
3,617,853	+		PFR28_03111	0.13	-2.6
3,617,854	-		PFR28_03111	0.13	-1.9
3,617,871	+		PFR28_03111	0.15	-3.0
3,617,871	+		PFR28_03111	0.15	-2.1
3,617,872	-		PFR28_03111	0.15	-3.1
3,617,970	-		PFR28_03111	0.28	-0.8
3,618,030	+		PFR28_03111	0.35	+0.2
3,618,050	+		PFR28_03111	0.38	-0.9
3,618,051	-		PFR28_03111	0.38	-1.4
3,618,051	-		PFR28_03111	0.38	-2.3
3,618,213	+		PFR28_03111	0.59	-3.2
3,618,213	+		PFR28_03111	0.59	-2.1
3,618,213	+		PFR28_03111	0.59	-2.2
3,618,213	+		PFR28_03111	0.59	-1.9
3,618,214	-		PFR28_03111	0.59	-3.3
3,618,282	+		PFR28_03111	0.67	-1.0
3,618,282	+		PFR28_03111	0.67	-1.3
3,618,282	+		PFR28_03111	0.67	-1.8
3,618,282	+		PFR28_03111	0.67	-2.1
3,618,283	-		PFR28_03111	0.68	-1.6
3,618,283	-		PFR28_03111	0.68	-3.6
3,618,283	-		PFR28_03111	0.68	-2.1
3,618,283	-		PFR28_03111	0.68	-2.2
3,618,283	-		PFR28_03111	0.68	-2.2
3,618,283	-		PFR28_03111	0.68	-2.3
3,618,291	+		PFR28_03111	0.69	-1.2
3,618,291	+		PFR28_03111	0.69	-2.6
3,618,291	+		PFR28_03111	0.69	-1.4
3,618,291	+		PFR28_03111	0.69	-2.1
3,618,291	+		PFR28_03111	0.69	-2.6
3,618,291	+		PFR28_03111	0.69	-1.4
3,618,291	+		PFR28_03111	0.69	-3.1
3,618,291	+		PFR28_03111	0.69	-3.3
3,618,291	+		PFR28_03111	0.69	-2.3
3,618,291	+		PFR28_03111	0.69	-3.0
3,618,292	-		PFR28_03111	0.69	-1.2
3,618,292	-		PFR28_03111	0.69	-2.0
3,618,292	-		PFR28_03111	0.69	-2.3
3,618,292	-		PFR28_03111	0.69	-3.4
3,618,292	-		PFR28_03111	0.69	-2.3
3,618,292	-		PFR28_03111	0.69	-1.4
3,618,292	-		PFR28_03111	0.69	-1.7
3,618,292	-		PFR28_03111	0.69	-1.1
3,618,292	-		PFR28_03111	0.69	-3.1
3,618,292	-		PFR28_03111	0.69	-1.8
3,618,292	-		PFR28_03111	0.69	-1.7
3,618,292	-		PFR28_03111	0.69	-0.4
3,618,292	-		PFR28_03111	0.69	-2.4
3,618,292	-		PFR28_03111	0.69	-2.3
3,618,292	-		PFR28_03111	0.69	+1.6
3,618,292	-		PFR28_03111	0.69	-3.3
3,618,292	-		PFR28_03111	0.69	-0.2
3,618,414	+		PFR28_03111	0.84	-1.0
3,618,414	+		PFR28_03111	0.84	-3.2
3,618,414	+		PFR28_03111	0.84	-1.2
3,618,414	+		PFR28_03111	0.84	-3.8
3,618,414	+		PFR28_03111	0.84	-2.5
3,618,415	-		PFR28_03111	0.84	-1.6
3,618,451	-		PFR28_03111	0.89	-1.5
3,618,474	+				-1.9
3,618,474	+				-3.0
3,618,474	+				-1.2
3,618,474	+				-2.3
3,618,475	-				-2.5
3,618,475	-				-1.4
3,618,475	-				-4.2
3,618,475	-				-3.2
3,618,475	-				-2.3