Strain Fitness in Pseudomonas sp. RS175 around PFR28_02483

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
2,958,330	+				+1.5
2,958,330	+				-0.4
2,958,331	-				+0.2
2,958,331	-				+0.1
2,958,331	-				+0.4
2,958,349	+				-0.8
2,958,349	+				-0.6
2,958,367	+				+0.1
2,958,367	+				+1.1
2,958,493	+				-1.1
2,958,493	+				+0.5
2,958,493	+				-0.4
2,958,494	-				-0.5
2,958,494	-				-0.3
2,958,494	-				-0.7
2,958,494	-				+0.4
2,958,727	-		PFR28_02482	0.42	-0.2
2,958,727	-		PFR28_02482	0.42	+0.4
2,958,727	-		PFR28_02482	0.42	+0.1
2,958,727	-		PFR28_02482	0.42	+0.4
2,958,775	+		PFR28_02482	0.50	-1.0
2,958,775	+		PFR28_02482	0.50	+0.8
2,958,775	+		PFR28_02482	0.50	+0.4
2,958,776	-		PFR28_02482	0.50	-0.3
2,958,776	-		PFR28_02482	0.50	-0.5
2,958,850	+		PFR28_02482	0.63	+2.0
2,958,850	+		PFR28_02482	0.63	-0.1
2,958,850	+		PFR28_02482	0.63	+0.7
2,958,850	+		PFR28_02482	0.63	+0.4
2,958,850	+		PFR28_02482	0.63	+0.0
2,958,850	+		PFR28_02482	0.63	-0.2
2,958,850	+		PFR28_02482	0.63	+0.8
2,958,850	+		PFR28_02482	0.63	+0.9
2,958,851	-		PFR28_02482	0.64	+0.2
2,958,851	-		PFR28_02482	0.64	+0.5
2,958,883	+		PFR28_02482	0.69	-0.6
2,958,883	+		PFR28_02482	0.69	+0.0
2,958,883	+		PFR28_02482	0.69	-0.5
2,958,883	+		PFR28_02482	0.69	-0.9
2,958,883	+		PFR28_02482	0.69	+0.3
2,958,884	-		PFR28_02482	0.70	-0.5
2,958,884	-		PFR28_02482	0.70	-0.0
2,958,884	-		PFR28_02482	0.70	+0.4
2,958,884	-		PFR28_02482	0.70	-0.9
2,959,009	+				+1.2
2,959,049	+				+0.1
2,959,049	+				+0.5
2,959,049	+				-0.3
2,959,049	+				+0.7
2,959,050	-				-0.5
2,959,050	-				-1.6
2,959,099	+				+0.9
2,959,099	+				+1.0
2,959,100	-				+0.2
2,959,144	+				-0.3
2,959,145	-				-0.0
2,959,145	-				-0.9
2,959,145	-				-3.0
2,959,172	-				+0.3
2,959,173	+				-2.5
2,959,173	+				-0.6
2,959,173	+				-1.6
2,959,173	+				+0.5
2,959,173	+				+0.6
2,959,173	+				-0.1
2,959,173	+				+0.6
2,959,173	+				-0.9
2,959,173	+				+0.4
2,959,173	+				-0.5
2,959,173	+				+0.0
2,959,173	+				-0.7
2,959,173	+				+0.5
2,959,173	+				-0.3
2,959,174	-				-1.1
2,959,174	-				-0.2
2,959,174	-				-0.3
2,959,174	-				+0.7
2,959,174	-				-1.2
2,959,174	-				-0.4
2,959,174	-				+0.3
2,959,177	+				+0.7
2,959,177	+				+1.5
2,959,177	+				-0.2
2,959,178	-				-0.3
2,959,178	-				+0.4
2,959,178	-				-0.8
2,959,178	-				-0.0
2,959,178	-				+0.2
2,959,193	+				-0.2
2,959,193	+				+0.3
2,959,193	+				-0.7
2,959,193	+				+0.3
2,959,193	+				+0.3
2,959,193	+				-0.3
2,959,193	+				+0.9
2,959,193	+				+0.2
2,959,194	-				+0.4
2,959,194	-				-2.8
2,959,194	-				+1.1
2,959,194	-				+0.1
2,959,194	-				+0.8
2,959,194	-				-3.4
2,959,194	-				+1.0
2,959,194	-				+1.1
2,959,194	-				+0.1
2,959,221	-				-0.0
2,959,300	+				+0.4
2,959,654	-		PFR28_02483	0.27	+0.3
2,959,654	-		PFR28_02483	0.27	+1.0
2,959,654	-		PFR28_02483	0.27	+1.1
2,959,773	+		PFR28_02483	0.36	+1.5
2,959,774	-		PFR28_02483	0.36	+1.2
2,959,869	+		PFR28_02483	0.43	+1.2
2,959,870	-		PFR28_02483	0.43	+1.2
2,959,870	-		PFR28_02483	0.43	+0.5
2,959,870	-		PFR28_02483	0.43	+1.1
2,959,870	-		PFR28_02483	0.43	+1.5
2,960,093	-		PFR28_02483	0.60	+0.3
2,960,114	-		PFR28_02483	0.61	+0.2
2,960,115	+		PFR28_02483	0.61	+2.2
2,960,115	+		PFR28_02483	0.61	+1.2
2,960,115	+		PFR28_02483	0.61	+1.2
2,960,115	+		PFR28_02483	0.61	+1.5
2,960,115	+		PFR28_02483	0.61	+1.1
2,960,115	+		PFR28_02483	0.61	+0.8
2,960,115	+		PFR28_02483	0.61	+1.9
2,960,115	+		PFR28_02483	0.61	+1.5
2,960,115	+		PFR28_02483	0.61	+1.4
2,960,116	-		PFR28_02483	0.61	+0.6
2,960,116	-		PFR28_02483	0.61	-0.3
2,960,116	-		PFR28_02483	0.61	+1.0
2,960,242	+		PFR28_02483	0.71	+1.2
2,960,242	+		PFR28_02483	0.71	+1.3
2,960,349	+		PFR28_02483	0.78	+1.5
2,960,349	+		PFR28_02483	0.78	+0.8
2,960,349	+		PFR28_02483	0.78	+1.5
2,960,349	+		PFR28_02483	0.78	+1.4
2,960,350	-		PFR28_02483	0.78	+1.3
2,960,350	-		PFR28_02483	0.78	+0.8
2,960,350	-		PFR28_02483	0.78	+1.5
2,960,350	-		PFR28_02483	0.78	+1.1
2,960,353	+		PFR28_02483	0.79	+0.8
2,960,353	+		PFR28_02483	0.79	-0.3
2,960,353	+		PFR28_02483	0.79	+2.1
2,960,353	+		PFR28_02483	0.79	+1.5
2,960,353	+		PFR28_02483	0.79	+1.0
2,960,353	+		PFR28_02483	0.79	+1.8
2,960,353	+		PFR28_02483	0.79	+1.1
2,960,353	+		PFR28_02483	0.79	+2.4
2,960,354	-		PFR28_02483	0.79	-0.5
2,960,354	-		PFR28_02483	0.79	+1.1
2,960,354	-		PFR28_02483	0.79	+1.4
2,960,354	-		PFR28_02483	0.79	+1.8
2,960,354	-		PFR28_02483	0.79	+1.1
2,960,478	+		PFR28_02483	0.88	+0.7
2,960,619	+				+1.3
2,960,619	+				+0.2
2,960,619	+				+1.5
2,960,619	+				+1.8
2,960,619	+				+1.0
2,960,619	+				+0.8
2,960,619	+				+1.1
2,960,619	+				-0.0
2,960,619	+				+0.4
2,960,619	+				+1.4
2,960,619	+				+1.2
2,960,620	-				+1.2
2,960,620	-				+0.5
2,960,620	-				+1.3
2,960,620	-				+1.4
2,960,620	-				+0.8
2,960,620	-				+1.5
2,960,620	-				+1.5
2,960,620	-				+1.2
2,960,620	-				+1.4
2,960,635	-				+2.5
2,960,635	-				-0.0
2,960,706	+				-0.3
2,960,706	+				+0.4
2,960,706	+				+0.3
2,960,706	+				-0.3
2,960,797	+				-0.2
2,960,798	-				-0.5
2,960,798	-				+1.5
2,960,798	-				-0.9
2,960,897	+				-0.3
2,960,945	+				-1.2
2,960,945	+				+1.1
2,960,945	+				-0.5
2,960,945	+				-0.7
2,960,946	-				+0.3
2,960,946	-				+0.0
2,960,946	-				+0.5
2,961,000	+				-0.0
2,961,000	+				+0.2
2,961,000	+				-0.3
2,961,000	+				-0.3
2,961,000	+				+0.0
2,961,001	-				-1.6
2,961,001	-				+0.3
2,961,018	+				-1.4
2,961,018	+				+0.7
2,961,019	-				-0.4
2,961,019	-				+1.2
2,961,019	-				+0.4
2,961,053	-				+0.3
2,961,054	+				-0.4
2,961,054	+				-1.2
2,961,054	+				+1.0
2,961,054	+				-0.2
2,961,055	-				+0.5
2,961,055	-				+1.2
2,961,055	-				+0.6
2,961,055	-				+0.4
2,961,099	+		PFR28_02484	0.12	+0.6
2,961,100	-		PFR28_02484	0.12	+0.2
2,961,100	-		PFR28_02484	0.12	+1.4
2,961,100	-		PFR28_02484	0.12	-0.1
2,961,100	-		PFR28_02484	0.12	-1.3
2,961,100	-		PFR28_02484	0.12	-0.0
2,961,100	-		PFR28_02484	0.12	-0.3
2,961,199	+		PFR28_02484	0.24	-0.3
2,961,216	+		PFR28_02484	0.26	-0.2
2,961,216	+		PFR28_02484	0.26	+0.0
2,961,216	+		PFR28_02484	0.26	-0.3
2,961,216	+		PFR28_02484	0.26	+0.6
2,961,217	-		PFR28_02484	0.26	+0.4
2,961,217	-		PFR28_02484	0.26	+0.3
2,961,288	+		PFR28_02484	0.35	-0.4
2,961,288	+		PFR28_02484	0.35	+1.3
2,961,289	-		PFR28_02484	0.35	+0.4
2,961,289	-		PFR28_02484	0.35	+0.1
2,961,289	-		PFR28_02484	0.35	-0.1
2,961,327	+		PFR28_02484	0.39	+0.6
2,961,327	+		PFR28_02484	0.39	-1.0
2,961,327	+		PFR28_02484	0.39	+0.3
2,961,327	+		PFR28_02484	0.39	+0.2
2,961,327	+		PFR28_02484	0.39	-0.3
2,961,327	+		PFR28_02484	0.39	+0.4
2,961,328	-		PFR28_02484	0.40	-0.2
2,961,328	-		PFR28_02484	0.40	+0.4
2,961,328	-		PFR28_02484	0.40	+0.4
2,961,390	+		PFR28_02484	0.47	-0.5
2,961,390	+		PFR28_02484	0.47	+0.8
2,961,390	+		PFR28_02484	0.47	-0.8
2,961,540	+		PFR28_02484	0.65	+0.4
2,961,541	-		PFR28_02484	0.65	+0.2
2,961,585	+		PFR28_02484	0.70	+1.0
2,961,586	-		PFR28_02484	0.70	-0.0
2,961,586	-		PFR28_02484	0.70	+0.2
2,961,627	+		PFR28_02484	0.75	-0.8
2,961,628	-		PFR28_02484	0.75	+0.2
2,961,628	-		PFR28_02484	0.75	+0.0