Strain Fitness in Pseudomonas sp. RS175 around PFR28_01273

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
1,387,795	+		PFR28_01271	0.79	-0.5
1,387,795	+		PFR28_01271	0.79	-1.1
1,387,795	+		PFR28_01271	0.79	+0.4
1,387,795	+		PFR28_01271	0.79	-0.2
1,387,796	-		PFR28_01271	0.79	-0.1
1,387,796	-		PFR28_01271	0.79	-0.3
1,387,796	-		PFR28_01271	0.79	+0.5
1,387,796	-		PFR28_01271	0.79	+2.2
1,387,880	-		PFR28_01271	0.85	+0.2
1,387,880	-		PFR28_01271	0.85	-1.6
1,387,966	+				+0.8
1,387,967	-				-1.6
1,387,967	-				+0.9
1,387,967	-				-2.1
1,387,967	-				+0.3
1,388,140	-				+1.1
1,388,140	-				-2.1
1,388,184	+		PFR28_01272	0.16	-0.8
1,388,184	+		PFR28_01272	0.16	-0.6
1,388,184	+		PFR28_01272	0.16	+0.5
1,388,185	-		PFR28_01272	0.16	+2.3
1,388,185	-		PFR28_01272	0.16	-0.3
1,388,221	-		PFR28_01272	0.22	+1.2
1,388,244	-		PFR28_01272	0.25	+0.2
1,388,315	+		PFR28_01272	0.36	-0.5
1,388,315	+		PFR28_01272	0.36	+0.9
1,388,316	-		PFR28_01272	0.36	-0.1
1,388,319	+		PFR28_01272	0.37	-0.9
1,388,319	+		PFR28_01272	0.37	-0.3
1,388,320	-		PFR28_01272	0.37	+1.0
1,388,320	-		PFR28_01272	0.37	-0.6
1,388,320	-		PFR28_01272	0.37	-1.3
1,388,320	-		PFR28_01272	0.37	-0.1
1,388,589	+		PFR28_01272	0.79	-0.8
1,388,589	+		PFR28_01272	0.79	+1.1
1,388,589	+		PFR28_01272	0.79	-1.1
1,388,589	+		PFR28_01272	0.79	-0.8
1,388,589	+		PFR28_01272	0.79	-0.9
1,388,590	-		PFR28_01272	0.79	-0.3
1,388,590	-		PFR28_01272	0.79	-1.6
1,388,590	-		PFR28_01272	0.79	+1.5
1,388,590	-		PFR28_01272	0.79	+0.3
1,388,651	-		PFR28_01272	0.88	-1.6
1,388,939	+		PFR28_01273	0.25	-1.1
1,388,939	+		PFR28_01273	0.25	+0.1
1,388,939	+		PFR28_01273	0.25	+0.4
1,388,939	+		PFR28_01273	0.25	+0.7
1,388,939	+		PFR28_01273	0.25	+0.4
1,388,939	+		PFR28_01273	0.25	-0.1
1,388,939	+		PFR28_01273	0.25	-0.1
1,388,940	-		PFR28_01273	0.25	+3.5
1,388,940	-		PFR28_01273	0.25	+3.5
1,388,940	-		PFR28_01273	0.25	+2.8
1,388,940	-		PFR28_01273	0.25	+3.7
1,388,940	-		PFR28_01273	0.25	+3.5
1,388,940	-		PFR28_01273	0.25	+3.1
1,388,940	-		PFR28_01273	0.25	+3.8
1,388,940	-		PFR28_01273	0.25	+3.3
1,388,943	+		PFR28_01273	0.25	+1.5
1,388,944	-		PFR28_01273	0.25	+3.8
1,388,944	-		PFR28_01273	0.25	+3.0
1,388,944	-		PFR28_01273	0.25	+3.8
1,389,140	+		PFR28_01273	0.48	-0.8
1,389,140	+		PFR28_01273	0.48	-0.7
1,389,141	-		PFR28_01273	0.48	+0.9
1,389,141	-		PFR28_01273	0.48	+0.9
1,389,141	-		PFR28_01273	0.48	+1.4
1,389,223	+		PFR28_01273	0.58	-1.3
1,389,223	+		PFR28_01273	0.58	+0.5
1,389,223	+		PFR28_01273	0.58	+1.1
1,389,223	+		PFR28_01273	0.58	-1.5
1,389,223	+		PFR28_01273	0.58	+0.1
1,389,223	+		PFR28_01273	0.58	-1.1
1,389,223	+		PFR28_01273	0.58	-2.7
1,389,223	+		PFR28_01273	0.58	-0.2
1,389,223	+		PFR28_01273	0.58	+0.4
1,389,223	+		PFR28_01273	0.58	+0.7
1,389,224	-		PFR28_01273	0.58	+1.4
1,389,224	-		PFR28_01273	0.58	+1.1
1,389,224	-		PFR28_01273	0.58	+0.4
1,389,224	-		PFR28_01273	0.58	-0.1
1,389,224	-		PFR28_01273	0.58	+3.3
1,389,224	-		PFR28_01273	0.58	+1.7
1,389,224	-		PFR28_01273	0.58	+0.8
1,389,284	+		PFR28_01273	0.65	-0.6
1,389,517	+				+0.8
1,389,518	-				-1.3
1,389,518	-				+0.1
1,389,518	-				-0.5
1,389,544	+				+0.3
1,389,564	+				+1.0
1,389,564	+				-0.7
1,389,564	+				+1.0
1,389,565	-				+0.4
1,389,565	-				+1.2
1,389,565	-				-1.5
1,389,565	-				+1.4
1,389,565	-				-0.3
1,389,565	-				-1.2
1,389,620	+				-1.5
1,389,621	-				+1.0
1,389,621	-				+1.3
1,389,621	-				+2.0
1,389,621	-				+1.8
1,389,621	-				+1.1
1,389,621	-				+1.6
1,389,624	+				-2.3
1,389,624	+				+1.7
1,389,624	+				-2.1
1,389,624	+				-2.1
1,389,624	+				-1.9
1,389,624	+				+1.8
1,389,624	+				+0.9
1,389,625	-				+1.5
1,389,625	-				+2.5
1,389,625	-				+2.2
1,389,625	-				+1.0
1,389,625	-				+2.3
1,389,625	-				+0.6
1,389,625	-				+3.2
1,389,625	-				+1.1
1,389,640	+				-0.6
1,389,640	+				+0.8
1,389,641	-				+1.0
1,389,641	-				+2.4
1,389,644	+				+0.9
1,389,644	+				+0.4
1,389,644	+				-2.7
1,389,644	+				+0.7
1,389,645	-				+1.2
1,389,645	-				+0.5
1,389,645	-				+2.5
1,389,645	-				+1.7
1,389,645	-				+0.9
1,389,645	-				+1.4
1,389,645	-				+0.8
1,389,645	-				+2.0
1,389,645	-				+1.4
1,389,645	-				+0.8
1,389,658	+				+0.7
1,389,658	+				+0.8
1,389,658	+				+0.9
1,389,659	-				+2.4
1,389,659	-				+1.5
1,389,659	-				+2.9
1,389,676	+				+0.3
1,389,677	-				+1.4
1,389,719	-				+2.4
1,389,814	+				+0.3
1,389,814	+				+1.2
1,389,814	+				-0.5
1,389,814	+				-0.0
1,389,815	-				+1.8
1,389,815	-				+2.4
1,389,815	-				+0.9
1,389,815	-				+2.3
1,389,815	-				+1.9
1,389,815	-				+2.1
1,389,816	+				+0.9
1,389,816	+				-0.5
1,389,816	+				-0.1
1,389,816	+				-1.0
1,389,816	+				+0.5
1,389,816	+				-1.1
1,389,816	+				+0.4
1,389,816	+				-1.2
1,389,816	+				-0.7
1,389,817	-				+1.4
1,389,817	-				+2.3
1,389,817	-				+2.7
1,389,817	-				+1.9
1,389,817	-				+1.7
1,389,817	-				+2.1
1,389,817	-				+1.7
1,389,817	-				+1.7
1,389,817	-				+1.6
1,389,817	-				+1.3
1,390,073	+		PFR28_01274	0.33	+0.3
1,390,073	+		PFR28_01274	0.33	+0.4
1,390,073	+		PFR28_01274	0.33	+0.7
1,390,074	-		PFR28_01274	0.33	+0.3
1,390,074	-		PFR28_01274	0.33	+0.7
1,390,338	+		PFR28_01274	0.79	-0.5
1,390,338	+		PFR28_01274	0.79	-0.9
1,390,339	-		PFR28_01274	0.79	+0.6
1,390,339	-		PFR28_01274	0.79	+0.1
1,390,339	-		PFR28_01274	0.79	-0.0
1,390,339	-		PFR28_01274	0.79	-0.6
1,390,425	+				+1.0
1,390,426	-				+1.6
1,390,469	+				+1.4
1,390,469	+				-0.3
1,390,469	+				-0.2