Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28090 and PS417_28095 are separated by 454 nucleotides PS417_28095 and PS417_28100 are separated by 58 nucleotides
PS417_28090: PS417_28090 - MFS transporter, at 6,062,683 to 6,063,972
_28090
PS417_28095: PS417_28095 - long-chain acyl-CoA thioester hydrolase, at 6,064,427 to 6,064,831
_28095
PS417_28100: PS417_28100 - glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) , at 6,064,890 to 6,065,789
_28100
Position (kb)
6064
6065 Strain fitness (log2 ratio)
-2
-1
0
1 at 6063.914 kb on + strand at 6063.972 kb on + strand at 6063.972 kb on + strand at 6063.972 kb on + strand at 6063.972 kb on + strand at 6063.972 kb on + strand at 6063.973 kb on - strand at 6063.973 kb on - strand at 6063.973 kb on - strand at 6063.973 kb on - strand at 6063.973 kb on - strand at 6063.987 kb on + strand at 6063.987 kb on + strand at 6063.987 kb on + strand at 6063.988 kb on - strand at 6063.989 kb on + strand at 6063.990 kb on - strand at 6063.990 kb on - strand at 6063.990 kb on - strand at 6063.990 kb on - strand at 6063.992 kb on + strand at 6064.035 kb on - strand at 6064.035 kb on - strand at 6064.078 kb on + strand at 6064.078 kb on + strand at 6064.079 kb on - strand at 6064.312 kb on - strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.344 kb on + strand at 6064.345 kb on - strand at 6064.345 kb on - strand at 6064.345 kb on - strand at 6064.393 kb on - strand at 6064.773 kb on + strand, within PS417_28095 at 6065.001 kb on + strand, within PS417_28100 at 6065.110 kb on + strand, within PS417_28100 at 6065.397 kb on + strand, within PS417_28100 at 6065.398 kb on - strand, within PS417_28100 at 6065.454 kb on + strand, within PS417_28100 at 6065.454 kb on + strand, within PS417_28100 at 6065.454 kb on + strand, within PS417_28100 at 6065.455 kb on - strand, within PS417_28100 at 6065.532 kb on + strand, within PS417_28100 at 6065.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 6,063,914 + +0.6 6,063,972 + -0.1 6,063,972 + -1.1 6,063,972 + +0.6 6,063,972 + -1.0 6,063,972 + -0.1 6,063,973 - -0.8 6,063,973 - -0.1 6,063,973 - -0.5 6,063,973 - +1.2 6,063,973 - +0.1 6,063,987 + +0.1 6,063,987 + -0.3 6,063,987 + -0.7 6,063,988 - +0.2 6,063,989 + -0.1 6,063,990 - +0.1 6,063,990 - +0.2 6,063,990 - -1.3 6,063,990 - +0.8 6,063,992 + -0.2 6,064,035 - +1.6 6,064,035 - -0.3 6,064,078 + +0.1 6,064,078 + +0.2 6,064,079 - -0.7 6,064,312 - +0.9 6,064,344 + +0.7 6,064,344 + +0.2 6,064,344 + -1.8 6,064,344 + +0.1 6,064,344 + -0.2 6,064,344 + +0.1 6,064,344 + -0.9 6,064,345 - +1.0 6,064,345 - +0.3 6,064,345 - +1.4 6,064,393 - +0.8 6,064,773 + PS417_28095 0.85 +0.7 6,065,001 + PS417_28100 0.12 -0.4 6,065,110 + PS417_28100 0.24 +1.2 6,065,397 + PS417_28100 0.56 +0.5 6,065,398 - PS417_28100 0.56 +0.3 6,065,454 + PS417_28100 0.63 -0.1 6,065,454 + PS417_28100 0.63 -1.6 6,065,454 + PS417_28100 0.63 -0.4 6,065,455 - PS417_28100 0.63 -0.2 6,065,532 + PS417_28100 0.71 -0.8 6,065,780 - +0.0
Or see this region's nucleotide sequence