Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4374 and Echvi_4375 are separated by 793 nucleotides Echvi_4375 and Echvi_4376 are separated by 168 nucleotides Echvi_4376 and Echvi_4377 are separated by 271 nucleotides
Echvi_4374: Echvi_4374 - Thiol-disulfide isomerase and thioredoxins, at 5,230,775 to 5,232,133
_4374
Echvi_4375: Echvi_4375 - hypothetical protein, at 5,232,927 to 5,233,028
_4375
Echvi_4376: Echvi_4376 - hypothetical protein, at 5,233,197 to 5,233,439
_4376
Echvi_4377: Echvi_4377 - hypothetical protein, at 5,233,711 to 5,234,262
_4377
Position (kb) 5232
5233
5234 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5231.930 kb on + strand, within Echvi_4374 at 5231.931 kb on - strand, within Echvi_4374 at 5232.005 kb on + strand at 5232.096 kb on - strand at 5232.096 kb on - strand at 5232.096 kb on - strand at 5232.096 kb on - strand at 5232.100 kb on - strand at 5232.100 kb on - strand at 5232.108 kb on - strand at 5232.114 kb on - strand at 5232.118 kb on - strand at 5232.118 kb on - strand at 5232.118 kb on - strand at 5232.118 kb on - strand at 5232.145 kb on + strand at 5232.170 kb on + strand at 5232.286 kb on + strand at 5232.287 kb on - strand at 5232.403 kb on + strand at 5232.444 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.446 kb on + strand at 5232.447 kb on - strand at 5232.447 kb on - strand at 5232.448 kb on + strand at 5232.448 kb on + strand at 5232.451 kb on + strand at 5232.451 kb on + strand at 5232.451 kb on + strand at 5232.452 kb on - strand at 5232.452 kb on - strand at 5232.457 kb on - strand at 5232.457 kb on - strand at 5232.516 kb on - strand at 5232.521 kb on + strand at 5232.521 kb on + strand at 5232.522 kb on - strand at 5232.522 kb on - strand at 5232.522 kb on - strand at 5232.525 kb on + strand at 5232.525 kb on + strand at 5232.525 kb on + strand at 5232.525 kb on + strand at 5232.526 kb on - strand at 5232.526 kb on - strand at 5232.526 kb on - strand at 5232.527 kb on + strand at 5232.527 kb on + strand at 5232.527 kb on + strand at 5232.528 kb on - strand at 5232.528 kb on - strand at 5232.593 kb on + strand at 5232.593 kb on + strand at 5232.593 kb on + strand at 5232.593 kb on + strand at 5232.594 kb on - strand at 5232.594 kb on - strand at 5232.598 kb on + strand at 5232.598 kb on + strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.599 kb on - strand at 5232.683 kb on - strand at 5232.714 kb on + strand at 5232.817 kb on - strand at 5232.875 kb on - strand at 5233.013 kb on + strand, within Echvi_4375 at 5233.029 kb on + strand at 5233.035 kb on - strand at 5233.037 kb on + strand at 5233.046 kb on + strand at 5233.047 kb on - strand at 5233.047 kb on - strand at 5233.107 kb on - strand at 5233.120 kb on - strand at 5233.135 kb on + strand at 5233.136 kb on - strand at 5233.137 kb on + strand at 5233.138 kb on - strand at 5233.138 kb on - strand at 5233.138 kb on - strand at 5233.175 kb on + strand at 5233.177 kb on + strand at 5233.181 kb on + strand at 5233.181 kb on + strand at 5233.182 kb on - strand at 5233.182 kb on - strand at 5233.185 kb on + strand at 5233.185 kb on + strand at 5233.210 kb on + strand at 5233.210 kb on + strand at 5233.210 kb on + strand at 5233.214 kb on + strand at 5233.214 kb on + strand at 5233.214 kb on + strand at 5233.231 kb on + strand, within Echvi_4376 at 5233.236 kb on - strand, within Echvi_4376 at 5233.260 kb on - strand, within Echvi_4376 at 5233.260 kb on - strand, within Echvi_4376 at 5233.277 kb on + strand, within Echvi_4376 at 5233.277 kb on + strand, within Echvi_4376 at 5233.284 kb on - strand, within Echvi_4376 at 5233.301 kb on + strand, within Echvi_4376 at 5233.308 kb on + strand, within Echvi_4376 at 5233.323 kb on - strand, within Echvi_4376 at 5233.323 kb on - strand, within Echvi_4376 at 5233.326 kb on + strand, within Echvi_4376 at 5233.339 kb on + strand, within Echvi_4376 at 5233.380 kb on - strand, within Echvi_4376 at 5233.508 kb on - strand at 5233.577 kb on + strand at 5233.641 kb on - strand at 5233.657 kb on - strand at 5233.710 kb on + strand at 5233.728 kb on - strand at 5233.736 kb on - strand at 5233.750 kb on - strand at 5233.755 kb on - strand at 5233.839 kb on - strand, within Echvi_4377 at 5233.849 kb on - strand, within Echvi_4377 at 5233.849 kb on - strand, within Echvi_4377 at 5233.849 kb on - strand, within Echvi_4377 at 5233.849 kb on - strand, within Echvi_4377 at 5233.856 kb on + strand, within Echvi_4377 at 5233.856 kb on + strand, within Echvi_4377 at 5233.877 kb on - strand, within Echvi_4377 at 5233.906 kb on - strand, within Echvi_4377 at 5233.906 kb on - strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.913 kb on + strand, within Echvi_4377 at 5233.914 kb on - strand, within Echvi_4377 at 5233.914 kb on - strand, within Echvi_4377 at 5233.916 kb on + strand, within Echvi_4377 at 5233.916 kb on + strand, within Echvi_4377 at 5233.916 kb on + strand, within Echvi_4377 at 5233.916 kb on + strand, within Echvi_4377 at 5233.917 kb on - strand, within Echvi_4377 at 5233.917 kb on - strand, within Echvi_4377 at 5233.917 kb on - strand, within Echvi_4377 at 5233.917 kb on - strand, within Echvi_4377 at 5233.918 kb on + strand, within Echvi_4377 at 5233.919 kb on - strand, within Echvi_4377 at 5233.919 kb on - strand, within Echvi_4377 at 5233.946 kb on + strand, within Echvi_4377 at 5233.947 kb on - strand, within Echvi_4377 at 5233.947 kb on - strand, within Echvi_4377 at 5233.979 kb on + strand, within Echvi_4377 at 5233.986 kb on + strand, within Echvi_4377 at 5233.986 kb on + strand, within Echvi_4377 at 5234.001 kb on + strand, within Echvi_4377 at 5234.022 kb on - strand, within Echvi_4377
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 5,231,930 + Echvi_4374 0.85 -1.3 5,231,931 - Echvi_4374 0.85 -0.0 5,232,005 + +0.8 5,232,096 - -1.8 5,232,096 - -0.9 5,232,096 - -0.2 5,232,096 - -0.5 5,232,100 - +0.6 5,232,100 - +0.2 5,232,108 - +0.6 5,232,114 - +0.8 5,232,118 - -1.1 5,232,118 - -0.8 5,232,118 - -0.2 5,232,118 - +0.3 5,232,145 + +0.3 5,232,170 + +1.1 5,232,286 + -1.7 5,232,287 - +0.1 5,232,403 + +1.5 5,232,444 + +1.9 5,232,446 + +0.7 5,232,446 + +0.7 5,232,446 + +0.6 5,232,446 + -0.4 5,232,446 + -0.1 5,232,446 + +3.5 5,232,446 + +0.5 5,232,447 - -1.3 5,232,447 - -0.2 5,232,448 + -2.6 5,232,448 + -0.4 5,232,451 + +0.0 5,232,451 + -0.2 5,232,451 + +0.1 5,232,452 - -1.4 5,232,452 - -0.1 5,232,457 - -2.0 5,232,457 - -0.0 5,232,516 - +0.3 5,232,521 + -0.1 5,232,521 + +1.0 5,232,522 - -0.8 5,232,522 - -0.3 5,232,522 - +0.2 5,232,525 + +1.9 5,232,525 + -0.4 5,232,525 + +0.3 5,232,525 + -0.4 5,232,526 - +0.5 5,232,526 - +1.0 5,232,526 - +0.0 5,232,527 + +0.4 5,232,527 + -0.3 5,232,527 + -0.1 5,232,528 - -0.3 5,232,528 - -1.3 5,232,593 + -1.3 5,232,593 + +0.6 5,232,593 + -0.4 5,232,593 + -0.8 5,232,594 - +0.3 5,232,594 - +0.5 5,232,598 + +0.4 5,232,598 + -0.3 5,232,599 - +0.5 5,232,599 - -0.5 5,232,599 - -0.3 5,232,599 - +2.2 5,232,599 - -0.9 5,232,599 - +1.9 5,232,599 - +0.2 5,232,683 - +2.1 5,232,714 + +0.3 5,232,817 - -0.2 5,232,875 - +0.8 5,233,013 + Echvi_4375 0.84 +0.7 5,233,029 + -0.1 5,233,035 - -1.3 5,233,037 + -0.9 5,233,046 + -0.9 5,233,047 - +0.5 5,233,047 - +0.2 5,233,107 - -0.4 5,233,120 - +0.9 5,233,135 + -0.7 5,233,136 - -1.3 5,233,137 + -0.1 5,233,138 - -0.9 5,233,138 - -0.5 5,233,138 - +0.0 5,233,175 + +0.9 5,233,177 + -0.8 5,233,181 + -0.9 5,233,181 + +0.4 5,233,182 - -1.2 5,233,182 - -0.9 5,233,185 + -1.4 5,233,185 + +0.7 5,233,210 + -0.6 5,233,210 + -0.5 5,233,210 + -0.2 5,233,214 + -0.4 5,233,214 + +0.1 5,233,214 + +0.2 5,233,231 + Echvi_4376 0.14 +1.4 5,233,236 - Echvi_4376 0.16 -0.3 5,233,260 - Echvi_4376 0.26 -0.0 5,233,260 - Echvi_4376 0.26 +0.2 5,233,277 + Echvi_4376 0.33 -0.6 5,233,277 + Echvi_4376 0.33 -0.1 5,233,284 - Echvi_4376 0.36 -0.0 5,233,301 + Echvi_4376 0.43 +0.2 5,233,308 + Echvi_4376 0.46 -1.3 5,233,323 - Echvi_4376 0.52 -1.3 5,233,323 - Echvi_4376 0.52 +0.6 5,233,326 + Echvi_4376 0.53 -0.3 5,233,339 + Echvi_4376 0.58 -0.7 5,233,380 - Echvi_4376 0.75 +0.4 5,233,508 - -0.6 5,233,577 + +0.0 5,233,641 - -0.5 5,233,657 - -1.0 5,233,710 + +0.7 5,233,728 - -1.9 5,233,736 - -0.7 5,233,750 - +0.1 5,233,755 - +0.3 5,233,839 - Echvi_4377 0.23 -0.2 5,233,849 - Echvi_4377 0.25 -0.8 5,233,849 - Echvi_4377 0.25 +0.8 5,233,849 - Echvi_4377 0.25 +0.0 5,233,849 - Echvi_4377 0.25 +0.9 5,233,856 + Echvi_4377 0.26 +0.4 5,233,856 + Echvi_4377 0.26 -1.0 5,233,877 - Echvi_4377 0.30 -0.4 5,233,906 - Echvi_4377 0.35 +0.2 5,233,906 - Echvi_4377 0.35 -0.0 5,233,913 + Echvi_4377 0.37 +0.6 5,233,913 + Echvi_4377 0.37 +0.5 5,233,913 + Echvi_4377 0.37 +1.5 5,233,913 + Echvi_4377 0.37 -0.2 5,233,913 + Echvi_4377 0.37 -0.5 5,233,913 + Echvi_4377 0.37 -0.0 5,233,914 - Echvi_4377 0.37 +0.5 5,233,914 - Echvi_4377 0.37 -2.4 5,233,916 + Echvi_4377 0.37 -0.9 5,233,916 + Echvi_4377 0.37 +0.0 5,233,916 + Echvi_4377 0.37 +1.5 5,233,916 + Echvi_4377 0.37 +0.4 5,233,917 - Echvi_4377 0.37 +1.5 5,233,917 - Echvi_4377 0.37 +0.7 5,233,917 - Echvi_4377 0.37 -0.7 5,233,917 - Echvi_4377 0.37 +0.6 5,233,918 + Echvi_4377 0.38 -0.4 5,233,919 - Echvi_4377 0.38 +0.5 5,233,919 - Echvi_4377 0.38 -0.9 5,233,946 + Echvi_4377 0.43 +0.6 5,233,947 - Echvi_4377 0.43 +0.5 5,233,947 - Echvi_4377 0.43 +0.1 5,233,979 + Echvi_4377 0.49 -0.1 5,233,986 + Echvi_4377 0.50 -0.2 5,233,986 + Echvi_4377 0.50 +0.3 5,234,001 + Echvi_4377 0.53 +1.0 5,234,022 - Echvi_4377 0.56 -0.4
Or see this region's nucleotide sequence