Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4028 and Echvi_4029 are separated by 51 nucleotides Echvi_4029 and Echvi_4030 are separated by 106 nucleotides Echvi_4030 and Echvi_4031 are separated by 121 nucleotides
Echvi_4028: Echvi_4028 - Outer membrane receptor for ferrienterochelin and colicins, at 4,822,566 to 4,824,929
_4028
Echvi_4029: Echvi_4029 - Thiol:disulfide interchange protein, at 4,824,981 to 4,825,478
_4029
Echvi_4030: Echvi_4030 - Pirin-related protein, at 4,825,585 to 4,826,604
_4030
Echvi_4031: Echvi_4031 - glycerate kinase, at 4,826,726 to 4,827,838
_4031
Position (kb)
4825
4826
4827 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4824.598 kb on - strand, within Echvi_4028 at 4824.683 kb on - strand, within Echvi_4028 at 4824.702 kb on - strand at 4824.753 kb on + strand at 4824.770 kb on - strand at 4824.803 kb on - strand at 4824.815 kb on - strand at 4824.865 kb on - strand at 4824.866 kb on + strand at 4824.932 kb on + strand at 4824.933 kb on - strand at 4825.040 kb on + strand, within Echvi_4029 at 4825.148 kb on + strand, within Echvi_4029 at 4825.152 kb on + strand, within Echvi_4029 at 4825.219 kb on - strand, within Echvi_4029 at 4825.324 kb on + strand, within Echvi_4029 at 4825.333 kb on + strand, within Echvi_4029 at 4825.343 kb on + strand, within Echvi_4029 at 4825.419 kb on + strand, within Echvi_4029 at 4825.593 kb on + strand at 4825.831 kb on - strand, within Echvi_4030 at 4825.997 kb on + strand, within Echvi_4030 at 4825.997 kb on + strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.281 kb on + strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030 at 4826.603 kb on - strand at 4826.607 kb on + strand at 4826.615 kb on + strand at 4826.885 kb on + strand, within Echvi_4031 at 4826.885 kb on + strand, within Echvi_4031 at 4826.926 kb on + strand, within Echvi_4031 at 4826.926 kb on + strand, within Echvi_4031 at 4826.927 kb on - strand, within Echvi_4031 at 4826.928 kb on + strand, within Echvi_4031 at 4826.928 kb on + strand, within Echvi_4031 at 4826.928 kb on + strand, within Echvi_4031 at 4826.928 kb on + strand, within Echvi_4031 at 4826.929 kb on - strand, within Echvi_4031 at 4827.033 kb on + strand, within Echvi_4031 at 4827.088 kb on + strand, within Echvi_4031 at 4827.280 kb on + strand, within Echvi_4031
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 4,824,598 - Echvi_4028 0.86 -0.1 4,824,683 - Echvi_4028 0.90 -0.3 4,824,702 - -0.8 4,824,753 + -0.6 4,824,770 - -0.1 4,824,803 - -0.3 4,824,815 - -0.1 4,824,865 - -2.9 4,824,866 + +1.4 4,824,932 + -1.2 4,824,933 - +0.4 4,825,040 + Echvi_4029 0.12 +2.3 4,825,148 + Echvi_4029 0.34 -0.0 4,825,152 + Echvi_4029 0.34 -0.4 4,825,219 - Echvi_4029 0.48 +1.1 4,825,324 + Echvi_4029 0.69 +0.4 4,825,333 + Echvi_4029 0.71 -0.4 4,825,343 + Echvi_4029 0.73 +0.2 4,825,419 + Echvi_4029 0.88 -1.6 4,825,593 + +1.7 4,825,831 - Echvi_4030 0.24 -1.3 4,825,997 + Echvi_4030 0.40 -0.3 4,825,997 + Echvi_4030 0.40 -1.1 4,826,142 - Echvi_4030 0.55 -0.3 4,826,142 - Echvi_4030 0.55 -0.8 4,826,142 - Echvi_4030 0.55 +0.3 4,826,281 + Echvi_4030 0.68 -0.5 4,826,282 - Echvi_4030 0.68 -0.8 4,826,282 - Echvi_4030 0.68 -0.1 4,826,282 - Echvi_4030 0.68 -2.0 4,826,603 - +0.2 4,826,607 + +0.3 4,826,615 + -2.9 4,826,885 + Echvi_4031 0.14 -0.6 4,826,885 + Echvi_4031 0.14 -1.5 4,826,926 + Echvi_4031 0.18 +0.4 4,826,926 + Echvi_4031 0.18 -0.2 4,826,927 - Echvi_4031 0.18 +0.7 4,826,928 + Echvi_4031 0.18 -0.6 4,826,928 + Echvi_4031 0.18 +0.2 4,826,928 + Echvi_4031 0.18 -0.1 4,826,928 + Echvi_4031 0.18 -0.7 4,826,929 - Echvi_4031 0.18 +0.5 4,827,033 + Echvi_4031 0.28 -0.2 4,827,088 + Echvi_4031 0.33 -2.3 4,827,280 + Echvi_4031 0.50 -2.0
Or see this region's nucleotide sequence