Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3836 and Echvi_3837 are separated by 206 nucleotides Echvi_3837 and Echvi_3838 are separated by 93 nucleotides
Echvi_3836: Echvi_3836 - FOG: Transposase and inactivated derivatives, at 4,585,346 to 4,586,578
_3836
Echvi_3837: Echvi_3837 - chromosome segregation protein SMC, common bacterial type, at 4,586,785 to 4,590,339
_3837
Echvi_3838: Echvi_3838 - Fe-S oxidoreductase, at 4,590,433 to 4,592,607
_3838
Position (kb)
4586
4587
4588
4589
4590
4591 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4586.762 kb on + strand at 4586.782 kb on + strand at 4586.782 kb on + strand at 4586.783 kb on - strand at 4586.783 kb on - strand at 4586.783 kb on - strand at 4586.785 kb on - strand at 4586.785 kb on - strand at 4586.817 kb on + strand at 4586.874 kb on - strand at 4587.067 kb on + strand at 4587.197 kb on - strand, within Echvi_3837 at 4587.197 kb on - strand, within Echvi_3837 at 4587.282 kb on + strand, within Echvi_3837 at 4587.366 kb on - strand, within Echvi_3837 at 4587.366 kb on - strand, within Echvi_3837 at 4587.371 kb on - strand, within Echvi_3837 at 4587.371 kb on - strand, within Echvi_3837 at 4587.390 kb on - strand, within Echvi_3837 at 4587.427 kb on + strand, within Echvi_3837 at 4587.513 kb on + strand, within Echvi_3837 at 4587.513 kb on + strand, within Echvi_3837 at 4587.514 kb on - strand, within Echvi_3837 at 4587.514 kb on - strand, within Echvi_3837 at 4587.557 kb on + strand, within Echvi_3837 at 4587.557 kb on + strand, within Echvi_3837 at 4587.654 kb on - strand, within Echvi_3837 at 4587.740 kb on + strand, within Echvi_3837 at 4587.772 kb on - strand, within Echvi_3837 at 4587.946 kb on + strand, within Echvi_3837 at 4587.947 kb on - strand, within Echvi_3837 at 4588.004 kb on + strand, within Echvi_3837 at 4588.004 kb on + strand, within Echvi_3837 at 4588.005 kb on - strand, within Echvi_3837 at 4588.010 kb on + strand, within Echvi_3837 at 4588.284 kb on - strand, within Echvi_3837 at 4588.398 kb on - strand, within Echvi_3837 at 4588.433 kb on - strand, within Echvi_3837 at 4588.433 kb on - strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.645 kb on + strand, within Echvi_3837 at 4588.645 kb on + strand, within Echvi_3837 at 4588.818 kb on - strand, within Echvi_3837 at 4588.818 kb on - strand, within Echvi_3837 at 4588.891 kb on - strand, within Echvi_3837 at 4588.903 kb on + strand, within Echvi_3837 at 4588.916 kb on + strand, within Echvi_3837 at 4588.917 kb on - strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.958 kb on - strand, within Echvi_3837 at 4588.958 kb on - strand, within Echvi_3837 at 4588.959 kb on + strand, within Echvi_3837 at 4588.959 kb on + strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4589.004 kb on + strand, within Echvi_3837 at 4589.043 kb on - strand, within Echvi_3837 at 4589.072 kb on + strand, within Echvi_3837 at 4589.072 kb on + strand, within Echvi_3837 at 4589.188 kb on + strand, within Echvi_3837 at 4589.188 kb on + strand, within Echvi_3837 at 4589.189 kb on - strand, within Echvi_3837 at 4589.189 kb on - strand, within Echvi_3837 at 4589.209 kb on + strand, within Echvi_3837 at 4589.209 kb on + strand, within Echvi_3837 at 4589.389 kb on + strand, within Echvi_3837 at 4589.389 kb on + strand, within Echvi_3837 at 4589.421 kb on - strand, within Echvi_3837 at 4589.484 kb on - strand, within Echvi_3837 at 4589.594 kb on + strand, within Echvi_3837 at 4589.594 kb on + strand, within Echvi_3837 at 4589.667 kb on + strand, within Echvi_3837 at 4589.753 kb on - strand, within Echvi_3837 at 4590.077 kb on + strand at 4590.077 kb on + strand at 4590.091 kb on + strand at 4590.256 kb on + strand at 4590.257 kb on - strand at 4590.324 kb on + strand at 4590.337 kb on + strand at 4590.356 kb on + strand at 4590.356 kb on + strand at 4590.361 kb on + strand at 4590.361 kb on + strand at 4590.361 kb on + strand at 4590.362 kb on - strand at 4590.362 kb on - strand at 4590.425 kb on - strand at 4590.429 kb on + strand at 4590.430 kb on - strand at 4590.765 kb on + strand, within Echvi_3838 at 4590.767 kb on + strand, within Echvi_3838 at 4590.848 kb on + strand, within Echvi_3838 at 4590.853 kb on - strand, within Echvi_3838 at 4590.914 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.958 kb on - strand, within Echvi_3838 at 4591.039 kb on + strand, within Echvi_3838 at 4591.057 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.128 kb on - strand, within Echvi_3838 at 4591.168 kb on + strand, within Echvi_3838 at 4591.257 kb on + strand, within Echvi_3838 at 4591.258 kb on - strand, within Echvi_3838 at 4591.330 kb on + strand, within Echvi_3838 at 4591.330 kb on + strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.337 kb on - strand, within Echvi_3838
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 4,586,762 + -0.5 4,586,782 + +0.5 4,586,782 + +0.4 4,586,783 - -0.2 4,586,783 - -0.4 4,586,783 - -0.1 4,586,785 - -0.4 4,586,785 - +2.0 4,586,817 + -0.8 4,586,874 - -0.5 4,587,067 + +0.2 4,587,197 - Echvi_3837 0.12 +0.1 4,587,197 - Echvi_3837 0.12 -1.5 4,587,282 + Echvi_3837 0.14 +0.7 4,587,366 - Echvi_3837 0.16 +0.6 4,587,366 - Echvi_3837 0.16 -0.3 4,587,371 - Echvi_3837 0.16 -0.3 4,587,371 - Echvi_3837 0.16 -2.3 4,587,390 - Echvi_3837 0.17 -0.1 4,587,427 + Echvi_3837 0.18 +0.7 4,587,513 + Echvi_3837 0.20 +0.9 4,587,513 + Echvi_3837 0.20 -0.1 4,587,514 - Echvi_3837 0.21 +0.2 4,587,514 - Echvi_3837 0.21 +0.1 4,587,557 + Echvi_3837 0.22 -0.4 4,587,557 + Echvi_3837 0.22 +0.8 4,587,654 - Echvi_3837 0.24 -3.1 4,587,740 + Echvi_3837 0.27 +2.7 4,587,772 - Echvi_3837 0.28 -0.7 4,587,946 + Echvi_3837 0.33 -0.8 4,587,947 - Echvi_3837 0.33 +0.4 4,588,004 + Echvi_3837 0.34 -2.3 4,588,004 + Echvi_3837 0.34 -0.6 4,588,005 - Echvi_3837 0.34 +1.1 4,588,010 + Echvi_3837 0.34 +0.3 4,588,284 - Echvi_3837 0.42 -2.0 4,588,398 - Echvi_3837 0.45 -0.2 4,588,433 - Echvi_3837 0.46 -1.1 4,588,433 - Echvi_3837 0.46 -0.3 4,588,627 + Echvi_3837 0.52 -0.5 4,588,627 + Echvi_3837 0.52 -1.5 4,588,627 + Echvi_3837 0.52 -0.2 4,588,627 + Echvi_3837 0.52 +0.2 4,588,627 + Echvi_3837 0.52 -0.8 4,588,627 + Echvi_3837 0.52 +0.5 4,588,628 - Echvi_3837 0.52 -2.6 4,588,628 - Echvi_3837 0.52 -0.7 4,588,628 - Echvi_3837 0.52 -0.3 4,588,628 - Echvi_3837 0.52 +0.7 4,588,645 + Echvi_3837 0.52 +0.1 4,588,645 + Echvi_3837 0.52 +0.1 4,588,818 - Echvi_3837 0.57 -2.3 4,588,818 - Echvi_3837 0.57 -0.2 4,588,891 - Echvi_3837 0.59 -0.9 4,588,903 + Echvi_3837 0.60 -1.3 4,588,916 + Echvi_3837 0.60 +0.2 4,588,917 - Echvi_3837 0.60 +0.1 4,588,957 + Echvi_3837 0.61 -0.2 4,588,957 + Echvi_3837 0.61 +0.7 4,588,957 + Echvi_3837 0.61 +0.7 4,588,958 - Echvi_3837 0.61 -0.8 4,588,958 - Echvi_3837 0.61 -0.6 4,588,959 + Echvi_3837 0.61 -0.1 4,588,959 + Echvi_3837 0.61 +0.1 4,588,960 - Echvi_3837 0.61 -0.3 4,588,960 - Echvi_3837 0.61 -0.7 4,588,960 - Echvi_3837 0.61 -0.0 4,589,004 + Echvi_3837 0.62 -1.7 4,589,043 - Echvi_3837 0.64 +0.4 4,589,072 + Echvi_3837 0.64 -0.7 4,589,072 + Echvi_3837 0.64 -1.8 4,589,188 + Echvi_3837 0.68 -0.1 4,589,188 + Echvi_3837 0.68 -1.1 4,589,189 - Echvi_3837 0.68 +0.7 4,589,189 - Echvi_3837 0.68 -2.4 4,589,209 + Echvi_3837 0.68 +0.2 4,589,209 + Echvi_3837 0.68 -0.5 4,589,389 + Echvi_3837 0.73 -0.2 4,589,389 + Echvi_3837 0.73 +1.0 4,589,421 - Echvi_3837 0.74 +1.3 4,589,484 - Echvi_3837 0.76 +0.6 4,589,594 + Echvi_3837 0.79 -1.1 4,589,594 + Echvi_3837 0.79 -1.2 4,589,667 + Echvi_3837 0.81 +0.4 4,589,753 - Echvi_3837 0.83 +0.1 4,590,077 + +0.1 4,590,077 + -0.2 4,590,091 + -0.1 4,590,256 + -1.1 4,590,257 - +1.0 4,590,324 + +0.1 4,590,337 + +1.5 4,590,356 + +2.2 4,590,356 + -0.6 4,590,361 + +0.1 4,590,361 + -1.0 4,590,361 + -0.1 4,590,362 - -0.5 4,590,362 - -1.5 4,590,425 - +0.1 4,590,429 + +0.6 4,590,430 - -0.7 4,590,765 + Echvi_3838 0.15 +0.0 4,590,767 + Echvi_3838 0.15 +0.4 4,590,848 + Echvi_3838 0.19 +0.6 4,590,853 - Echvi_3838 0.19 +0.1 4,590,914 + Echvi_3838 0.22 +0.9 4,590,948 + Echvi_3838 0.24 -2.6 4,590,948 + Echvi_3838 0.24 -0.2 4,590,948 + Echvi_3838 0.24 -1.4 4,590,948 + Echvi_3838 0.24 +0.1 4,590,958 - Echvi_3838 0.24 +0.7 4,591,039 + Echvi_3838 0.28 -1.3 4,591,057 + Echvi_3838 0.29 +1.9 4,591,118 + Echvi_3838 0.31 -0.9 4,591,118 + Echvi_3838 0.31 -0.3 4,591,118 + Echvi_3838 0.31 +1.2 4,591,118 + Echvi_3838 0.31 -0.1 4,591,119 - Echvi_3838 0.32 -0.0 4,591,119 - Echvi_3838 0.32 +1.0 4,591,119 - Echvi_3838 0.32 +0.5 4,591,119 - Echvi_3838 0.32 -0.1 4,591,119 - Echvi_3838 0.32 -0.2 4,591,119 - Echvi_3838 0.32 +1.0 4,591,119 - Echvi_3838 0.32 +0.1 4,591,127 + Echvi_3838 0.32 +2.4 4,591,127 + Echvi_3838 0.32 -0.3 4,591,127 + Echvi_3838 0.32 +1.0 4,591,128 - Echvi_3838 0.32 -1.1 4,591,168 + Echvi_3838 0.34 +0.8 4,591,257 + Echvi_3838 0.38 -0.2 4,591,258 - Echvi_3838 0.38 -2.1 4,591,330 + Echvi_3838 0.41 +0.6 4,591,330 + Echvi_3838 0.41 -0.3 4,591,331 - Echvi_3838 0.41 -0.4 4,591,331 - Echvi_3838 0.41 +0.7 4,591,331 - Echvi_3838 0.41 -0.5 4,591,337 - Echvi_3838 0.42 -0.4
Or see this region's nucleotide sequence