Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2989 and Echvi_2990 are separated by 5 nucleotides Echvi_2990 and Echvi_2991 are separated by 129 nucleotides
Echvi_2989: Echvi_2989 - Protein of unknown function (DUF1573)., at 3,572,344 to 3,573,441
_2989
Echvi_2990: Echvi_2990 - Acyl-CoA dehydrogenases, at 3,573,447 to 3,574,655
_2990
Echvi_2991: Echvi_2991 - Tryptophan 2,3-dioxygenase (vermilion), at 3,574,785 to 3,575,759
_2991
Position (kb)
3573
3574
3575 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3572.568 kb on + strand, within Echvi_2989 at 3572.605 kb on - strand, within Echvi_2989 at 3572.718 kb on - strand, within Echvi_2989 at 3572.718 kb on - strand, within Echvi_2989 at 3572.718 kb on - strand, within Echvi_2989 at 3572.758 kb on + strand, within Echvi_2989 at 3572.758 kb on + strand, within Echvi_2989 at 3572.767 kb on + strand, within Echvi_2989 at 3572.768 kb on - strand, within Echvi_2989 at 3572.768 kb on - strand, within Echvi_2989 at 3572.769 kb on + strand, within Echvi_2989 at 3572.770 kb on - strand, within Echvi_2989 at 3572.770 kb on - strand, within Echvi_2989 at 3572.790 kb on + strand, within Echvi_2989 at 3572.796 kb on + strand, within Echvi_2989 at 3572.803 kb on - strand, within Echvi_2989 at 3572.820 kb on - strand, within Echvi_2989 at 3572.820 kb on - strand, within Echvi_2989 at 3572.820 kb on - strand, within Echvi_2989 at 3572.820 kb on - strand, within Echvi_2989 at 3572.820 kb on - strand, within Echvi_2989 at 3572.898 kb on + strand, within Echvi_2989 at 3572.899 kb on - strand, within Echvi_2989 at 3572.925 kb on + strand, within Echvi_2989 at 3572.952 kb on + strand, within Echvi_2989 at 3573.006 kb on - strand, within Echvi_2989 at 3573.034 kb on - strand, within Echvi_2989 at 3573.094 kb on + strand, within Echvi_2989 at 3573.146 kb on + strand, within Echvi_2989 at 3573.207 kb on + strand, within Echvi_2989 at 3573.208 kb on - strand, within Echvi_2989 at 3573.208 kb on - strand, within Echvi_2989 at 3573.208 kb on - strand, within Echvi_2989 at 3573.238 kb on - strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.270 kb on + strand, within Echvi_2989 at 3573.271 kb on - strand, within Echvi_2989 at 3573.271 kb on - strand, within Echvi_2989 at 3573.292 kb on + strand, within Echvi_2989 at 3573.366 kb on + strand at 3573.367 kb on - strand at 3573.398 kb on + strand at 3573.423 kb on + strand at 3573.465 kb on - strand at 3573.517 kb on + strand at 3573.517 kb on + strand at 3573.518 kb on - strand at 3573.545 kb on + strand at 3573.546 kb on - strand at 3573.635 kb on + strand, within Echvi_2990 at 3573.636 kb on - strand, within Echvi_2990 at 3573.687 kb on + strand, within Echvi_2990 at 3573.688 kb on - strand, within Echvi_2990 at 3573.696 kb on + strand, within Echvi_2990 at 3573.762 kb on + strand, within Echvi_2990 at 3573.762 kb on + strand, within Echvi_2990 at 3573.762 kb on + strand, within Echvi_2990 at 3573.779 kb on + strand, within Echvi_2990 at 3573.780 kb on - strand, within Echvi_2990 at 3573.829 kb on + strand, within Echvi_2990 at 3573.830 kb on - strand, within Echvi_2990 at 3573.998 kb on + strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3574.020 kb on - strand, within Echvi_2990 at 3574.046 kb on + strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.083 kb on + strand, within Echvi_2990 at 3574.083 kb on + strand, within Echvi_2990 at 3574.087 kb on - strand, within Echvi_2990 at 3574.087 kb on - strand, within Echvi_2990 at 3574.093 kb on - strand, within Echvi_2990 at 3574.093 kb on - strand, within Echvi_2990 at 3574.112 kb on + strand, within Echvi_2990 at 3574.137 kb on + strand, within Echvi_2990 at 3574.138 kb on - strand, within Echvi_2990 at 3574.141 kb on - strand, within Echvi_2990 at 3574.144 kb on + strand, within Echvi_2990 at 3574.388 kb on + strand, within Echvi_2990 at 3574.388 kb on + strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.390 kb on + strand, within Echvi_2990 at 3574.391 kb on - strand, within Echvi_2990 at 3574.412 kb on - strand, within Echvi_2990 at 3574.412 kb on - strand, within Echvi_2990 at 3574.507 kb on + strand, within Echvi_2990 at 3574.507 kb on + strand, within Echvi_2990 at 3574.508 kb on - strand, within Echvi_2990 at 3574.557 kb on + strand at 3574.656 kb on - strand at 3574.657 kb on + strand at 3574.658 kb on - strand at 3574.658 kb on - strand at 3574.699 kb on - strand at 3574.700 kb on + strand at 3574.720 kb on + strand at 3574.734 kb on + strand at 3574.780 kb on + strand at 3574.805 kb on + strand at 3574.834 kb on + strand at 3574.834 kb on + strand at 3574.835 kb on - strand at 3574.835 kb on - strand at 3574.846 kb on - strand at 3574.846 kb on - strand at 3574.848 kb on - strand at 3574.894 kb on - strand, within Echvi_2991 at 3574.906 kb on + strand, within Echvi_2991 at 3574.907 kb on - strand, within Echvi_2991 at 3574.911 kb on + strand, within Echvi_2991 at 3574.912 kb on - strand, within Echvi_2991 at 3574.912 kb on - strand, within Echvi_2991 at 3574.920 kb on + strand, within Echvi_2991 at 3574.920 kb on + strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.922 kb on + strand, within Echvi_2991 at 3574.923 kb on - strand, within Echvi_2991 at 3574.970 kb on + strand, within Echvi_2991 at 3575.032 kb on + strand, within Echvi_2991 at 3575.033 kb on - strand, within Echvi_2991 at 3575.068 kb on + strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.183 kb on + strand, within Echvi_2991 at 3575.304 kb on - strand, within Echvi_2991 at 3575.470 kb on + strand, within Echvi_2991 at 3575.470 kb on + strand, within Echvi_2991 at 3575.544 kb on + strand, within Echvi_2991 at 3575.545 kb on - strand, within Echvi_2991 at 3575.565 kb on - strand, within Echvi_2991 at 3575.576 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.581 kb on - strand, within Echvi_2991 at 3575.581 kb on - strand, within Echvi_2991 at 3575.588 kb on + strand, within Echvi_2991 at 3575.637 kb on + strand, within Echvi_2991 at 3575.638 kb on - strand, within Echvi_2991
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 3,572,568 + Echvi_2989 0.20 +1.6 3,572,605 - Echvi_2989 0.24 -0.8 3,572,718 - Echvi_2989 0.34 -0.7 3,572,718 - Echvi_2989 0.34 +0.1 3,572,718 - Echvi_2989 0.34 +0.4 3,572,758 + Echvi_2989 0.38 +0.3 3,572,758 + Echvi_2989 0.38 +0.4 3,572,767 + Echvi_2989 0.39 -0.4 3,572,768 - Echvi_2989 0.39 -0.8 3,572,768 - Echvi_2989 0.39 -1.5 3,572,769 + Echvi_2989 0.39 +0.3 3,572,770 - Echvi_2989 0.39 +0.8 3,572,770 - Echvi_2989 0.39 -0.6 3,572,790 + Echvi_2989 0.41 +0.2 3,572,796 + Echvi_2989 0.41 -1.5 3,572,803 - Echvi_2989 0.42 -0.3 3,572,820 - Echvi_2989 0.43 +0.1 3,572,820 - Echvi_2989 0.43 +0.5 3,572,820 - Echvi_2989 0.43 +1.2 3,572,820 - Echvi_2989 0.43 +0.4 3,572,820 - Echvi_2989 0.43 +0.3 3,572,898 + Echvi_2989 0.50 +0.5 3,572,899 - Echvi_2989 0.51 -0.8 3,572,925 + Echvi_2989 0.53 -0.3 3,572,952 + Echvi_2989 0.55 +1.0 3,573,006 - Echvi_2989 0.60 -1.1 3,573,034 - Echvi_2989 0.63 -0.5 3,573,094 + Echvi_2989 0.68 -1.2 3,573,146 + Echvi_2989 0.73 +0.6 3,573,207 + Echvi_2989 0.79 +0.7 3,573,208 - Echvi_2989 0.79 +0.9 3,573,208 - Echvi_2989 0.79 +0.3 3,573,208 - Echvi_2989 0.79 +0.4 3,573,238 - Echvi_2989 0.81 -0.6 3,573,270 + Echvi_2989 0.84 -2.2 3,573,270 + Echvi_2989 0.84 +1.2 3,573,270 + Echvi_2989 0.84 -0.1 3,573,270 + Echvi_2989 0.84 -0.8 3,573,270 + Echvi_2989 0.84 -0.1 3,573,270 + Echvi_2989 0.84 -0.4 3,573,271 - Echvi_2989 0.84 -0.2 3,573,271 - Echvi_2989 0.84 +1.4 3,573,292 + Echvi_2989 0.86 +1.1 3,573,366 + +0.3 3,573,367 - -1.0 3,573,398 + -3.4 3,573,423 + -0.7 3,573,465 - +1.5 3,573,517 + -2.1 3,573,517 + +0.4 3,573,518 - -0.2 3,573,545 + -1.5 3,573,546 - +0.4 3,573,635 + Echvi_2990 0.16 +0.2 3,573,636 - Echvi_2990 0.16 +0.5 3,573,687 + Echvi_2990 0.20 +0.2 3,573,688 - Echvi_2990 0.20 +0.7 3,573,696 + Echvi_2990 0.21 -0.0 3,573,762 + Echvi_2990 0.26 -1.1 3,573,762 + Echvi_2990 0.26 -1.9 3,573,762 + Echvi_2990 0.26 -0.1 3,573,779 + Echvi_2990 0.27 +0.4 3,573,780 - Echvi_2990 0.28 -1.1 3,573,829 + Echvi_2990 0.32 -0.3 3,573,830 - Echvi_2990 0.32 -0.0 3,573,998 + Echvi_2990 0.46 -0.4 3,573,999 - Echvi_2990 0.46 -0.1 3,573,999 - Echvi_2990 0.46 -0.2 3,573,999 - Echvi_2990 0.46 -1.9 3,574,020 - Echvi_2990 0.47 +0.0 3,574,046 + Echvi_2990 0.50 -0.1 3,574,047 - Echvi_2990 0.50 -2.7 3,574,047 - Echvi_2990 0.50 -0.7 3,574,047 - Echvi_2990 0.50 +0.7 3,574,083 + Echvi_2990 0.53 -1.2 3,574,083 + Echvi_2990 0.53 +0.5 3,574,087 - Echvi_2990 0.53 +0.4 3,574,087 - Echvi_2990 0.53 +0.4 3,574,093 - Echvi_2990 0.53 +0.8 3,574,093 - Echvi_2990 0.53 -0.6 3,574,112 + Echvi_2990 0.55 +0.0 3,574,137 + Echvi_2990 0.57 -1.5 3,574,138 - Echvi_2990 0.57 -0.5 3,574,141 - Echvi_2990 0.57 -1.1 3,574,144 + Echvi_2990 0.58 -0.3 3,574,388 + Echvi_2990 0.78 -0.5 3,574,388 + Echvi_2990 0.78 -0.5 3,574,389 - Echvi_2990 0.78 -0.4 3,574,389 - Echvi_2990 0.78 +1.7 3,574,389 - Echvi_2990 0.78 -2.0 3,574,390 + Echvi_2990 0.78 -2.3 3,574,391 - Echvi_2990 0.78 +0.0 3,574,412 - Echvi_2990 0.80 +1.0 3,574,412 - Echvi_2990 0.80 -0.3 3,574,507 + Echvi_2990 0.88 -0.4 3,574,507 + Echvi_2990 0.88 -0.5 3,574,508 - Echvi_2990 0.88 -0.5 3,574,557 + +0.3 3,574,656 - +1.1 3,574,657 + +1.2 3,574,658 - -0.7 3,574,658 - +2.2 3,574,699 - -0.7 3,574,700 + -0.3 3,574,720 + -0.2 3,574,734 + +0.2 3,574,780 + +0.2 3,574,805 + -0.3 3,574,834 + +0.7 3,574,834 + +1.7 3,574,835 - +0.1 3,574,835 - -0.3 3,574,846 - -0.2 3,574,846 - +1.0 3,574,848 - +0.3 3,574,894 - Echvi_2991 0.11 +0.1 3,574,906 + Echvi_2991 0.12 -0.7 3,574,907 - Echvi_2991 0.13 -1.3 3,574,911 + Echvi_2991 0.13 -0.6 3,574,912 - Echvi_2991 0.13 +0.0 3,574,912 - Echvi_2991 0.13 -0.9 3,574,920 + Echvi_2991 0.14 -1.5 3,574,920 + Echvi_2991 0.14 -0.7 3,574,921 - Echvi_2991 0.14 -0.0 3,574,921 - Echvi_2991 0.14 -0.7 3,574,921 - Echvi_2991 0.14 +1.9 3,574,922 + Echvi_2991 0.14 +0.1 3,574,923 - Echvi_2991 0.14 -2.1 3,574,970 + Echvi_2991 0.19 -2.1 3,575,032 + Echvi_2991 0.25 +0.2 3,575,033 - Echvi_2991 0.25 -0.2 3,575,068 + Echvi_2991 0.29 -1.0 3,575,069 - Echvi_2991 0.29 +0.3 3,575,069 - Echvi_2991 0.29 -1.2 3,575,069 - Echvi_2991 0.29 +0.5 3,575,183 + Echvi_2991 0.41 -1.9 3,575,304 - Echvi_2991 0.53 -1.5 3,575,470 + Echvi_2991 0.70 +2.0 3,575,470 + Echvi_2991 0.70 -0.3 3,575,544 + Echvi_2991 0.78 -0.9 3,575,545 - Echvi_2991 0.78 +0.7 3,575,565 - Echvi_2991 0.80 -1.4 3,575,576 + Echvi_2991 0.81 -1.1 3,575,580 + Echvi_2991 0.82 +1.2 3,575,580 + Echvi_2991 0.82 -1.7 3,575,580 + Echvi_2991 0.82 -0.0 3,575,581 - Echvi_2991 0.82 -0.8 3,575,581 - Echvi_2991 0.82 +0.2 3,575,588 + Echvi_2991 0.82 +0.3 3,575,637 + Echvi_2991 0.87 -2.0 3,575,638 - Echvi_2991 0.87 +0.2
Or see this region's nucleotide sequence