Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2946 and Echvi_2947 are separated by 145 nucleotides Echvi_2947 and Echvi_2948 are separated by 318 nucleotides
Echvi_2946: Echvi_2946 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 3,523,452 to 3,524,459
_2946
Echvi_2947: Echvi_2947 - hypothetical protein, at 3,524,605 to 3,524,856
_2947
Echvi_2948: Echvi_2948 - replicative DNA helicase, at 3,525,175 to 3,526,773
_2948
Position (kb)
3524
3525 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3523.932 kb on - strand, within Echvi_2946 at 3524.317 kb on + strand, within Echvi_2946 at 3524.346 kb on - strand, within Echvi_2946 at 3524.402 kb on + strand at 3524.402 kb on + strand at 3524.403 kb on - strand at 3524.406 kb on + strand at 3524.407 kb on - strand at 3524.407 kb on - strand at 3524.407 kb on - strand at 3524.410 kb on + strand at 3524.484 kb on + strand at 3524.520 kb on + strand at 3524.521 kb on - strand at 3524.575 kb on + strand at 3524.575 kb on + strand at 3524.576 kb on - strand at 3524.611 kb on + strand at 3524.612 kb on - strand at 3524.612 kb on - strand at 3524.612 kb on - strand at 3524.634 kb on + strand, within Echvi_2947 at 3524.690 kb on - strand, within Echvi_2947 at 3524.695 kb on + strand, within Echvi_2947 at 3524.711 kb on - strand, within Echvi_2947 at 3524.725 kb on + strand, within Echvi_2947 at 3524.803 kb on + strand, within Echvi_2947 at 3524.944 kb on - strand at 3524.945 kb on + strand at 3524.946 kb on - strand at 3524.955 kb on + strand at 3524.955 kb on + strand at 3524.956 kb on - strand at 3524.956 kb on - strand at 3524.956 kb on - strand at 3524.960 kb on - strand at 3525.035 kb on - strand at 3525.035 kb on - strand at 3525.035 kb on - strand at 3525.035 kb on - strand at 3525.043 kb on + strand at 3525.130 kb on + strand at 3525.162 kb on + strand at 3525.174 kb on + strand at 3525.174 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 3,523,932 - Echvi_2946 0.48 -2.1 3,524,317 + Echvi_2946 0.86 +0.1 3,524,346 - Echvi_2946 0.89 -1.1 3,524,402 + +1.6 3,524,402 + -2.2 3,524,403 - +0.1 3,524,406 + +1.1 3,524,407 - -1.7 3,524,407 - -1.5 3,524,407 - +1.2 3,524,410 + -0.0 3,524,484 + +0.5 3,524,520 + +3.2 3,524,521 - +0.2 3,524,575 + +0.9 3,524,575 + +1.1 3,524,576 - +0.1 3,524,611 + -1.8 3,524,612 - -0.8 3,524,612 - -0.1 3,524,612 - -0.7 3,524,634 + Echvi_2947 0.12 +0.0 3,524,690 - Echvi_2947 0.34 -0.2 3,524,695 + Echvi_2947 0.36 +1.1 3,524,711 - Echvi_2947 0.42 -1.2 3,524,725 + Echvi_2947 0.48 +0.7 3,524,803 + Echvi_2947 0.79 +0.5 3,524,944 - -0.4 3,524,945 + -1.2 3,524,946 - +0.1 3,524,955 + -0.1 3,524,955 + +2.9 3,524,956 - +0.1 3,524,956 - -2.7 3,524,956 - -0.1 3,524,960 - +0.0 3,525,035 - -0.1 3,525,035 - -1.5 3,525,035 - -0.0 3,525,035 - -1.6 3,525,043 + +0.6 3,525,130 + +1.9 3,525,162 + +0.5 3,525,174 + -1.7 3,525,174 + -0.6
Or see this region's nucleotide sequence