Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2862 and Echvi_2863 are separated by 6 nucleotides Echvi_2863 and Echvi_2864 are separated by 130 nucleotides Echvi_2864 and Echvi_2865 are separated by 225 nucleotides
Echvi_2862: Echvi_2862 - glucose-6-phosphate 1-dehydrogenase, at 3,432,555 to 3,434,072
_2862
Echvi_2863: Echvi_2863 - 6-phosphogluconolactonase, at 3,434,079 to 3,434,804
_2863
Echvi_2864: Echvi_2864 - Predicted acetyltransferase, at 3,434,935 to 3,435,219
_2864
Echvi_2865: Echvi_2865 - Predicted dehydrogenases and related proteins, at 3,435,445 to 3,436,923
_2865
Position (kb)
3434
3435
3436 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3434.044 kb on + strand at 3434.044 kb on + strand at 3434.045 kb on - strand at 3434.071 kb on - strand at 3434.084 kb on - strand at 3434.891 kb on + strand at 3434.894 kb on - strand at 3434.917 kb on + strand at 3434.939 kb on + strand at 3434.952 kb on + strand at 3435.042 kb on - strand, within Echvi_2864 at 3435.062 kb on + strand, within Echvi_2864 at 3435.076 kb on - strand, within Echvi_2864 at 3435.139 kb on + strand, within Echvi_2864 at 3435.142 kb on - strand, within Echvi_2864 at 3435.184 kb on - strand, within Echvi_2864 at 3435.217 kb on + strand at 3435.218 kb on - strand at 3435.226 kb on + strand at 3435.227 kb on - strand at 3435.227 kb on - strand at 3435.312 kb on - strand at 3435.343 kb on - strand at 3435.350 kb on - strand at 3435.405 kb on + strand at 3435.410 kb on + strand at 3435.417 kb on + strand at 3435.467 kb on + strand at 3435.535 kb on - strand at 3435.535 kb on - strand at 3435.579 kb on + strand at 3435.706 kb on - strand, within Echvi_2865 at 3435.843 kb on - strand, within Echvi_2865 at 3435.846 kb on + strand, within Echvi_2865 at 3435.847 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.886 kb on - strand, within Echvi_2865 at 3435.907 kb on + strand, within Echvi_2865 at 3435.907 kb on + strand, within Echvi_2865 at 3435.908 kb on - strand, within Echvi_2865 at 3435.908 kb on - strand, within Echvi_2865 at 3435.944 kb on + strand, within Echvi_2865 at 3435.944 kb on + strand, within Echvi_2865 at 3435.945 kb on - strand, within Echvi_2865 at 3435.980 kb on + strand, within Echvi_2865 at 3435.980 kb on + strand, within Echvi_2865 at 3435.981 kb on - strand, within Echvi_2865 at 3435.981 kb on - strand, within Echvi_2865 at 3436.022 kb on - strand, within Echvi_2865 at 3436.057 kb on - strand, within Echvi_2865 at 3436.077 kb on + strand, within Echvi_2865 at 3436.078 kb on - strand, within Echvi_2865 at 3436.078 kb on - strand, within Echvi_2865 at 3436.152 kb on + strand, within Echvi_2865 at 3436.153 kb on - strand, within Echvi_2865 at 3436.207 kb on + strand, within Echvi_2865 at 3436.207 kb on + strand, within Echvi_2865 at 3436.209 kb on + strand, within Echvi_2865 at 3436.209 kb on + strand, within Echvi_2865
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 3,434,044 + -0.1 3,434,044 + -0.9 3,434,045 - -0.4 3,434,071 - -0.2 3,434,084 - +0.7 3,434,891 + -1.4 3,434,894 - -0.8 3,434,917 + -1.0 3,434,939 + -0.9 3,434,952 + +0.0 3,435,042 - Echvi_2864 0.38 +0.8 3,435,062 + Echvi_2864 0.45 -0.7 3,435,076 - Echvi_2864 0.49 +0.4 3,435,139 + Echvi_2864 0.72 -0.2 3,435,142 - Echvi_2864 0.73 -0.5 3,435,184 - Echvi_2864 0.87 +2.1 3,435,217 + -0.8 3,435,218 - -0.0 3,435,226 + -0.2 3,435,227 - -0.3 3,435,227 - +0.4 3,435,312 - +0.2 3,435,343 - +1.7 3,435,350 - +0.1 3,435,405 + +1.0 3,435,410 + +0.0 3,435,417 + -0.2 3,435,467 + +0.1 3,435,535 - +1.0 3,435,535 - -0.3 3,435,579 + -0.9 3,435,706 - Echvi_2865 0.18 -1.4 3,435,843 - Echvi_2865 0.27 +1.1 3,435,846 + Echvi_2865 0.27 +0.7 3,435,847 - Echvi_2865 0.27 -0.3 3,435,886 - Echvi_2865 0.30 +0.0 3,435,886 - Echvi_2865 0.30 +0.1 3,435,886 - Echvi_2865 0.30 -1.8 3,435,886 - Echvi_2865 0.30 +0.5 3,435,886 - Echvi_2865 0.30 -0.4 3,435,886 - Echvi_2865 0.30 -0.2 3,435,907 + Echvi_2865 0.31 -3.0 3,435,907 + Echvi_2865 0.31 -0.6 3,435,908 - Echvi_2865 0.31 -0.1 3,435,908 - Echvi_2865 0.31 +0.1 3,435,944 + Echvi_2865 0.34 +0.4 3,435,944 + Echvi_2865 0.34 -0.2 3,435,945 - Echvi_2865 0.34 +0.1 3,435,980 + Echvi_2865 0.36 -1.6 3,435,980 + Echvi_2865 0.36 -1.5 3,435,981 - Echvi_2865 0.36 +0.9 3,435,981 - Echvi_2865 0.36 -1.0 3,436,022 - Echvi_2865 0.39 +0.4 3,436,057 - Echvi_2865 0.41 -0.5 3,436,077 + Echvi_2865 0.43 +2.2 3,436,078 - Echvi_2865 0.43 -1.8 3,436,078 - Echvi_2865 0.43 -1.0 3,436,152 + Echvi_2865 0.48 +0.1 3,436,153 - Echvi_2865 0.48 +0.1 3,436,207 + Echvi_2865 0.52 -1.0 3,436,207 + Echvi_2865 0.52 +0.5 3,436,209 + Echvi_2865 0.52 -0.6 3,436,209 + Echvi_2865 0.52 -1.0
Or see this region's nucleotide sequence