Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2797 and Echvi_2798 are separated by 36 nucleotides Echvi_2798 and Echvi_2799 are separated by 1 nucleotides Echvi_2799 and Echvi_2800 are separated by 117 nucleotides Echvi_2800 and Echvi_2801 are separated by 166 nucleotides
Echvi_2797: Echvi_2797 - Na+/proline symporter, at 3,343,886 to 3,345,349
_2797
Echvi_2798: Echvi_2798 - Acetyltransferases, at 3,345,386 to 3,345,823
_2798
Echvi_2799: Echvi_2799 - Predicted amino acid racemase, at 3,345,825 to 3,346,895
_2799
Echvi_2800: Echvi_2800 - hypothetical protein, at 3,347,013 to 3,347,618
_2800
Echvi_2801: Echvi_2801 - hypothetical protein, at 3,347,785 to 3,347,934
_2801
Position (kb)
3345
3346
3347 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3344.830 kb on - strand, within Echvi_2797 at 3344.830 kb on - strand, within Echvi_2797 at 3344.830 kb on - strand, within Echvi_2797 at 3344.830 kb on - strand, within Echvi_2797 at 3344.830 kb on - strand, within Echvi_2797 at 3344.868 kb on - strand, within Echvi_2797 at 3344.954 kb on - strand, within Echvi_2797 at 3344.985 kb on - strand, within Echvi_2797 at 3344.986 kb on + strand, within Echvi_2797 at 3344.999 kb on - strand, within Echvi_2797 at 3345.069 kb on - strand, within Echvi_2797 at 3345.069 kb on - strand, within Echvi_2797 at 3345.074 kb on + strand, within Echvi_2797 at 3345.082 kb on + strand, within Echvi_2797 at 3345.083 kb on - strand, within Echvi_2797 at 3345.130 kb on + strand, within Echvi_2797 at 3345.259 kb on - strand at 3345.259 kb on - strand at 3345.319 kb on + strand at 3345.319 kb on + strand at 3345.320 kb on - strand at 3345.320 kb on - strand at 3345.320 kb on - strand at 3345.329 kb on - strand at 3345.351 kb on + strand at 3345.385 kb on + strand at 3345.393 kb on + strand at 3345.393 kb on + strand at 3345.393 kb on + strand at 3345.407 kb on - strand at 3345.416 kb on - strand at 3345.425 kb on + strand at 3345.494 kb on + strand, within Echvi_2798 at 3345.494 kb on + strand, within Echvi_2798 at 3345.495 kb on - strand, within Echvi_2798 at 3345.497 kb on - strand, within Echvi_2798 at 3345.497 kb on - strand, within Echvi_2798 at 3345.515 kb on + strand, within Echvi_2798 at 3345.601 kb on + strand, within Echvi_2798 at 3345.602 kb on - strand, within Echvi_2798 at 3345.602 kb on - strand, within Echvi_2798 at 3345.602 kb on - strand, within Echvi_2798 at 3345.634 kb on + strand, within Echvi_2798 at 3345.634 kb on + strand, within Echvi_2798 at 3345.635 kb on - strand, within Echvi_2798 at 3345.640 kb on - strand, within Echvi_2798 at 3345.640 kb on - strand, within Echvi_2798 at 3345.640 kb on - strand, within Echvi_2798 at 3345.644 kb on + strand, within Echvi_2798 at 3345.644 kb on + strand, within Echvi_2798 at 3345.645 kb on - strand, within Echvi_2798 at 3345.645 kb on - strand, within Echvi_2798 at 3345.708 kb on + strand, within Echvi_2798 at 3345.708 kb on + strand, within Echvi_2798 at 3345.727 kb on + strand, within Echvi_2798 at 3345.728 kb on - strand, within Echvi_2798 at 3345.729 kb on + strand, within Echvi_2798 at 3345.742 kb on - strand, within Echvi_2798 at 3345.797 kb on + strand at 3345.798 kb on - strand at 3345.845 kb on + strand at 3345.948 kb on + strand, within Echvi_2799 at 3345.949 kb on - strand, within Echvi_2799 at 3346.013 kb on + strand, within Echvi_2799 at 3346.049 kb on - strand, within Echvi_2799 at 3346.052 kb on + strand, within Echvi_2799 at 3346.052 kb on + strand, within Echvi_2799 at 3346.052 kb on + strand, within Echvi_2799 at 3346.052 kb on + strand, within Echvi_2799 at 3346.095 kb on + strand, within Echvi_2799 at 3346.105 kb on + strand, within Echvi_2799 at 3346.106 kb on - strand, within Echvi_2799 at 3346.106 kb on - strand, within Echvi_2799 at 3346.130 kb on + strand, within Echvi_2799 at 3346.133 kb on + strand, within Echvi_2799 at 3346.133 kb on + strand, within Echvi_2799 at 3346.279 kb on + strand, within Echvi_2799 at 3346.280 kb on - strand, within Echvi_2799 at 3346.301 kb on - strand, within Echvi_2799 at 3346.319 kb on - strand, within Echvi_2799 at 3346.356 kb on + strand, within Echvi_2799 at 3346.356 kb on + strand, within Echvi_2799 at 3346.356 kb on + strand, within Echvi_2799 at 3346.356 kb on + strand, within Echvi_2799 at 3346.356 kb on + strand, within Echvi_2799 at 3346.357 kb on - strand, within Echvi_2799 at 3346.370 kb on - strand, within Echvi_2799 at 3346.370 kb on - strand, within Echvi_2799 at 3346.370 kb on - strand, within Echvi_2799 at 3346.473 kb on - strand, within Echvi_2799 at 3346.491 kb on + strand, within Echvi_2799 at 3346.502 kb on + strand, within Echvi_2799 at 3346.502 kb on + strand, within Echvi_2799 at 3346.595 kb on - strand, within Echvi_2799 at 3346.595 kb on - strand, within Echvi_2799 at 3346.657 kb on - strand, within Echvi_2799 at 3346.690 kb on + strand, within Echvi_2799 at 3346.690 kb on + strand, within Echvi_2799 at 3346.691 kb on - strand, within Echvi_2799 at 3346.691 kb on - strand, within Echvi_2799 at 3346.697 kb on - strand, within Echvi_2799 at 3346.697 kb on - strand, within Echvi_2799 at 3346.697 kb on - strand, within Echvi_2799 at 3346.699 kb on + strand, within Echvi_2799 at 3346.699 kb on + strand, within Echvi_2799 at 3346.700 kb on - strand, within Echvi_2799 at 3346.717 kb on - strand, within Echvi_2799 at 3346.766 kb on + strand, within Echvi_2799 at 3346.783 kb on + strand, within Echvi_2799 at 3346.788 kb on - strand, within Echvi_2799 at 3346.788 kb on - strand, within Echvi_2799 at 3346.835 kb on - strand at 3346.839 kb on + strand at 3346.840 kb on - strand at 3346.869 kb on + strand at 3346.869 kb on + strand at 3346.870 kb on - strand at 3346.872 kb on + strand at 3346.872 kb on + strand at 3346.872 kb on + strand at 3346.942 kb on - strand at 3346.982 kb on + strand at 3346.983 kb on - strand at 3346.984 kb on + strand at 3346.985 kb on - strand at 3346.985 kb on - strand at 3347.002 kb on - strand at 3347.002 kb on - strand at 3347.004 kb on - strand at 3347.106 kb on - strand, within Echvi_2800 at 3347.173 kb on - strand, within Echvi_2800 at 3347.178 kb on - strand, within Echvi_2800 at 3347.205 kb on + strand, within Echvi_2800 at 3347.210 kb on + strand, within Echvi_2800 at 3347.253 kb on + strand, within Echvi_2800 at 3347.360 kb on + strand, within Echvi_2800 at 3347.495 kb on + strand, within Echvi_2800 at 3347.529 kb on + strand, within Echvi_2800 at 3347.602 kb on + strand at 3347.607 kb on + strand at 3347.608 kb on - strand at 3347.650 kb on + strand at 3347.651 kb on - strand at 3347.651 kb on - strand at 3347.746 kb on + strand at 3347.746 kb on + strand at 3347.747 kb on - strand at 3347.790 kb on + strand at 3347.790 kb on + strand at 3347.791 kb on - strand at 3347.791 kb on - strand at 3347.791 kb on - strand at 3347.831 kb on + strand, within Echvi_2801 at 3347.831 kb on + strand, within Echvi_2801 at 3347.832 kb on - strand, within Echvi_2801 at 3347.832 kb on - strand, within Echvi_2801 at 3347.832 kb on - strand, within Echvi_2801 at 3347.840 kb on + strand, within Echvi_2801 at 3347.865 kb on + strand, within Echvi_2801 at 3347.865 kb on + strand, within Echvi_2801 at 3347.865 kb on + strand, within Echvi_2801 at 3347.866 kb on - strand, within Echvi_2801 at 3347.866 kb on - strand, within Echvi_2801 at 3347.866 kb on - strand, within Echvi_2801 at 3347.869 kb on + strand, within Echvi_2801 at 3347.869 kb on + strand, within Echvi_2801 at 3347.870 kb on - strand, within Echvi_2801
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 3,344,830 - Echvi_2797 0.64 +0.1 3,344,830 - Echvi_2797 0.64 -1.5 3,344,830 - Echvi_2797 0.64 +0.9 3,344,830 - Echvi_2797 0.64 +0.4 3,344,830 - Echvi_2797 0.64 +0.6 3,344,868 - Echvi_2797 0.67 +0.3 3,344,954 - Echvi_2797 0.73 -0.6 3,344,985 - Echvi_2797 0.75 +0.3 3,344,986 + Echvi_2797 0.75 -0.2 3,344,999 - Echvi_2797 0.76 -1.3 3,345,069 - Echvi_2797 0.81 +1.3 3,345,069 - Echvi_2797 0.81 +2.5 3,345,074 + Echvi_2797 0.81 +1.7 3,345,082 + Echvi_2797 0.82 +0.3 3,345,083 - Echvi_2797 0.82 +0.3 3,345,130 + Echvi_2797 0.85 -1.0 3,345,259 - -0.7 3,345,259 - -2.7 3,345,319 + +0.1 3,345,319 + +0.5 3,345,320 - -2.1 3,345,320 - +1.7 3,345,320 - -0.5 3,345,329 - +0.1 3,345,351 + +0.3 3,345,385 + +0.5 3,345,393 + +1.4 3,345,393 + -2.2 3,345,393 + -1.3 3,345,407 - +1.0 3,345,416 - -0.3 3,345,425 + -0.6 3,345,494 + Echvi_2798 0.25 -0.8 3,345,494 + Echvi_2798 0.25 -0.6 3,345,495 - Echvi_2798 0.25 -0.6 3,345,497 - Echvi_2798 0.25 +0.2 3,345,497 - Echvi_2798 0.25 -1.1 3,345,515 + Echvi_2798 0.29 -0.0 3,345,601 + Echvi_2798 0.49 +0.2 3,345,602 - Echvi_2798 0.49 -1.1 3,345,602 - Echvi_2798 0.49 +1.6 3,345,602 - Echvi_2798 0.49 +0.4 3,345,634 + Echvi_2798 0.57 -0.3 3,345,634 + Echvi_2798 0.57 +1.2 3,345,635 - Echvi_2798 0.57 -0.2 3,345,640 - Echvi_2798 0.58 -0.8 3,345,640 - Echvi_2798 0.58 +0.9 3,345,640 - Echvi_2798 0.58 -0.4 3,345,644 + Echvi_2798 0.59 +0.6 3,345,644 + Echvi_2798 0.59 +0.6 3,345,645 - Echvi_2798 0.59 -0.7 3,345,645 - Echvi_2798 0.59 -0.7 3,345,708 + Echvi_2798 0.74 +1.2 3,345,708 + Echvi_2798 0.74 +0.3 3,345,727 + Echvi_2798 0.78 -0.1 3,345,728 - Echvi_2798 0.78 -0.2 3,345,729 + Echvi_2798 0.78 -0.1 3,345,742 - Echvi_2798 0.81 +1.0 3,345,797 + +3.1 3,345,798 - +0.4 3,345,845 + -0.4 3,345,948 + Echvi_2799 0.11 +0.0 3,345,949 - Echvi_2799 0.12 -0.6 3,346,013 + Echvi_2799 0.18 -0.0 3,346,049 - Echvi_2799 0.21 -0.8 3,346,052 + Echvi_2799 0.21 -0.6 3,346,052 + Echvi_2799 0.21 +0.6 3,346,052 + Echvi_2799 0.21 -0.9 3,346,052 + Echvi_2799 0.21 -0.6 3,346,095 + Echvi_2799 0.25 -0.4 3,346,105 + Echvi_2799 0.26 -1.4 3,346,106 - Echvi_2799 0.26 +0.4 3,346,106 - Echvi_2799 0.26 -0.1 3,346,130 + Echvi_2799 0.28 -1.1 3,346,133 + Echvi_2799 0.29 +0.4 3,346,133 + Echvi_2799 0.29 -1.0 3,346,279 + Echvi_2799 0.42 +1.0 3,346,280 - Echvi_2799 0.42 -1.4 3,346,301 - Echvi_2799 0.44 -0.5 3,346,319 - Echvi_2799 0.46 -0.1 3,346,356 + Echvi_2799 0.50 +0.3 3,346,356 + Echvi_2799 0.50 +0.5 3,346,356 + Echvi_2799 0.50 -1.4 3,346,356 + Echvi_2799 0.50 -1.8 3,346,356 + Echvi_2799 0.50 -0.9 3,346,357 - Echvi_2799 0.50 +1.7 3,346,370 - Echvi_2799 0.51 +0.1 3,346,370 - Echvi_2799 0.51 +1.3 3,346,370 - Echvi_2799 0.51 -0.2 3,346,473 - Echvi_2799 0.61 +0.1 3,346,491 + Echvi_2799 0.62 +1.7 3,346,502 + Echvi_2799 0.63 -0.6 3,346,502 + Echvi_2799 0.63 +0.4 3,346,595 - Echvi_2799 0.72 -2.3 3,346,595 - Echvi_2799 0.72 -0.4 3,346,657 - Echvi_2799 0.78 +0.2 3,346,690 + Echvi_2799 0.81 -0.3 3,346,690 + Echvi_2799 0.81 -0.1 3,346,691 - Echvi_2799 0.81 -0.0 3,346,691 - Echvi_2799 0.81 -0.3 3,346,697 - Echvi_2799 0.81 -0.2 3,346,697 - Echvi_2799 0.81 -0.6 3,346,697 - Echvi_2799 0.81 -0.6 3,346,699 + Echvi_2799 0.82 -0.3 3,346,699 + Echvi_2799 0.82 -0.3 3,346,700 - Echvi_2799 0.82 -0.0 3,346,717 - Echvi_2799 0.83 -0.5 3,346,766 + Echvi_2799 0.88 -0.5 3,346,783 + Echvi_2799 0.89 -1.1 3,346,788 - Echvi_2799 0.90 +0.6 3,346,788 - Echvi_2799 0.90 -1.7 3,346,835 - +1.4 3,346,839 + +0.4 3,346,840 - +0.1 3,346,869 + -0.9 3,346,869 + -2.2 3,346,870 - +0.3 3,346,872 + -0.3 3,346,872 + -0.9 3,346,872 + -0.8 3,346,942 - +0.6 3,346,982 + -0.8 3,346,983 - -0.7 3,346,984 + +1.7 3,346,985 - -0.3 3,346,985 - +0.7 3,347,002 - -0.3 3,347,002 - +0.8 3,347,004 - -1.9 3,347,106 - Echvi_2800 0.15 +0.3 3,347,173 - Echvi_2800 0.26 +0.6 3,347,178 - Echvi_2800 0.27 -1.3 3,347,205 + Echvi_2800 0.32 -0.7 3,347,210 + Echvi_2800 0.33 -0.9 3,347,253 + Echvi_2800 0.40 +0.0 3,347,360 + Echvi_2800 0.57 +0.1 3,347,495 + Echvi_2800 0.80 +0.1 3,347,529 + Echvi_2800 0.85 +0.1 3,347,602 + +1.1 3,347,607 + -0.2 3,347,608 - +0.9 3,347,650 + -0.4 3,347,651 - -0.0 3,347,651 - -0.8 3,347,746 + +2.1 3,347,746 + -2.1 3,347,747 - +0.1 3,347,790 + +0.0 3,347,790 + +0.6 3,347,791 - -1.6 3,347,791 - -1.4 3,347,791 - -0.4 3,347,831 + Echvi_2801 0.31 -0.9 3,347,831 + Echvi_2801 0.31 -1.1 3,347,832 - Echvi_2801 0.31 -1.0 3,347,832 - Echvi_2801 0.31 -3.2 3,347,832 - Echvi_2801 0.31 +0.1 3,347,840 + Echvi_2801 0.37 -0.5 3,347,865 + Echvi_2801 0.53 -0.6 3,347,865 + Echvi_2801 0.53 -1.9 3,347,865 + Echvi_2801 0.53 +0.7 3,347,866 - Echvi_2801 0.54 -0.6 3,347,866 - Echvi_2801 0.54 -0.1 3,347,866 - Echvi_2801 0.54 +0.6 3,347,869 + Echvi_2801 0.56 +0.1 3,347,869 + Echvi_2801 0.56 -0.1 3,347,870 - Echvi_2801 0.57 +0.1
Or see this region's nucleotide sequence