Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2071 and Echvi_2072 are separated by 69 nucleotides Echvi_2072 and Echvi_2073 are separated by 175 nucleotides
Echvi_2071: Echvi_2071 - outer membrane assembly lipoprotein YfiO, at 2,441,279 to 2,442,229
_2071
Echvi_2072: Echvi_2072 - hypothetical protein, at 2,442,299 to 2,443,015
_2072
Echvi_2073: Echvi_2073 - Organic solvent tolerance protein OstA, at 2,443,191 to 2,444,840
_2073
Position (kb)
2442
2443
2444 Strain fitness (log2 ratio)
-1
0
1
2 at 2442.290 kb on + strand at 2442.291 kb on - strand at 2442.291 kb on - strand at 2442.300 kb on + strand at 2442.301 kb on - strand at 2442.350 kb on + strand at 2442.363 kb on + strand at 2442.491 kb on - strand, within Echvi_2072 at 2442.517 kb on + strand, within Echvi_2072 at 2442.518 kb on - strand, within Echvi_2072 at 2442.518 kb on - strand, within Echvi_2072 at 2442.600 kb on + strand, within Echvi_2072 at 2442.601 kb on - strand, within Echvi_2072 at 2442.601 kb on - strand, within Echvi_2072 at 2442.640 kb on + strand, within Echvi_2072 at 2442.653 kb on + strand, within Echvi_2072 at 2442.654 kb on - strand, within Echvi_2072 at 2442.692 kb on - strand, within Echvi_2072 at 2442.785 kb on + strand, within Echvi_2072 at 2442.786 kb on - strand, within Echvi_2072 at 2442.791 kb on + strand, within Echvi_2072 at 2442.791 kb on + strand, within Echvi_2072 at 2442.791 kb on + strand, within Echvi_2072 at 2442.792 kb on - strand, within Echvi_2072 at 2442.844 kb on - strand, within Echvi_2072 at 2442.844 kb on - strand, within Echvi_2072 at 2442.873 kb on - strand, within Echvi_2072 at 2442.895 kb on + strand, within Echvi_2072 at 2443.045 kb on + strand at 2443.046 kb on - strand at 2443.071 kb on - strand at 2443.071 kb on - strand at 2443.077 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 2,442,290 + -1.3 2,442,291 - -0.1 2,442,291 - +1.9 2,442,300 + -1.5 2,442,301 - +0.4 2,442,350 + +0.0 2,442,363 + +0.5 2,442,491 - Echvi_2072 0.27 -0.6 2,442,517 + Echvi_2072 0.30 +2.6 2,442,518 - Echvi_2072 0.31 +0.7 2,442,518 - Echvi_2072 0.31 -0.7 2,442,600 + Echvi_2072 0.42 +1.9 2,442,601 - Echvi_2072 0.42 +1.0 2,442,601 - Echvi_2072 0.42 -0.1 2,442,640 + Echvi_2072 0.48 -0.5 2,442,653 + Echvi_2072 0.49 -0.1 2,442,654 - Echvi_2072 0.50 -1.7 2,442,692 - Echvi_2072 0.55 +1.1 2,442,785 + Echvi_2072 0.68 +0.2 2,442,786 - Echvi_2072 0.68 +0.3 2,442,791 + Echvi_2072 0.69 +0.6 2,442,791 + Echvi_2072 0.69 +0.6 2,442,791 + Echvi_2072 0.69 +0.6 2,442,792 - Echvi_2072 0.69 +0.6 2,442,844 - Echvi_2072 0.76 -0.3 2,442,844 - Echvi_2072 0.76 +1.9 2,442,873 - Echvi_2072 0.80 +1.1 2,442,895 + Echvi_2072 0.83 +0.3 2,443,045 + -1.2 2,443,046 - -0.6 2,443,071 - +0.1 2,443,071 - -0.3 2,443,077 - -0.1
Or see this region's nucleotide sequence