Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1080 and Echvi_1081 are separated by 15 nucleotides Echvi_1081 and Echvi_1082 overlap by 28 nucleotides Echvi_1082 and Echvi_1083 are separated by 24 nucleotides
Echvi_1080: Echvi_1080 - hypothetical protein, at 1,242,511 to 1,242,843
_1080
Echvi_1081: Echvi_1081 - hypothetical protein, at 1,242,859 to 1,243,407
_1081
Echvi_1082: Echvi_1082 - Acetyltransferases, at 1,243,380 to 1,244,195
_1082
Echvi_1083: Echvi_1083 - N-acyl-D-aspartate/D-glutamate deacylase, at 1,244,220 to 1,245,902
_1083
Position (kb)
1243
1244
1245 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1242.491 kb on - strand at 1242.509 kb on + strand at 1242.510 kb on - strand at 1242.513 kb on - strand at 1242.513 kb on - strand at 1242.513 kb on - strand at 1242.515 kb on - strand at 1242.595 kb on + strand, within Echvi_1080 at 1242.596 kb on - strand, within Echvi_1080 at 1242.610 kb on + strand, within Echvi_1080 at 1242.619 kb on + strand, within Echvi_1080 at 1242.619 kb on + strand, within Echvi_1080 at 1242.619 kb on + strand, within Echvi_1080 at 1242.656 kb on + strand, within Echvi_1080 at 1242.736 kb on + strand, within Echvi_1080 at 1242.818 kb on - strand at 1242.818 kb on - strand at 1242.858 kb on - strand at 1242.915 kb on + strand, within Echvi_1081 at 1243.021 kb on + strand, within Echvi_1081 at 1243.022 kb on - strand, within Echvi_1081 at 1243.022 kb on - strand, within Echvi_1081 at 1243.115 kb on + strand, within Echvi_1081 at 1243.116 kb on - strand, within Echvi_1081 at 1243.124 kb on + strand, within Echvi_1081 at 1243.125 kb on - strand, within Echvi_1081 at 1243.156 kb on + strand, within Echvi_1081 at 1243.212 kb on + strand, within Echvi_1081 at 1243.213 kb on - strand, within Echvi_1081 at 1243.213 kb on - strand, within Echvi_1081 at 1243.213 kb on - strand, within Echvi_1081 at 1243.223 kb on + strand, within Echvi_1081 at 1243.321 kb on + strand, within Echvi_1081 at 1243.321 kb on + strand, within Echvi_1081 at 1243.343 kb on - strand, within Echvi_1081 at 1243.343 kb on - strand, within Echvi_1081 at 1243.343 kb on - strand, within Echvi_1081 at 1243.363 kb on + strand at 1243.399 kb on + strand at 1243.572 kb on + strand, within Echvi_1082 at 1243.585 kb on + strand, within Echvi_1082 at 1243.585 kb on + strand, within Echvi_1082 at 1243.585 kb on + strand, within Echvi_1082 at 1243.585 kb on + strand, within Echvi_1082 at 1243.585 kb on + strand, within Echvi_1082 at 1243.586 kb on - strand, within Echvi_1082 at 1243.586 kb on - strand, within Echvi_1082 at 1243.661 kb on + strand, within Echvi_1082 at 1243.662 kb on - strand, within Echvi_1082 at 1243.662 kb on - strand, within Echvi_1082 at 1243.684 kb on + strand, within Echvi_1082 at 1243.684 kb on + strand, within Echvi_1082 at 1243.685 kb on - strand, within Echvi_1082 at 1243.685 kb on - strand, within Echvi_1082 at 1243.700 kb on + strand, within Echvi_1082 at 1243.729 kb on + strand, within Echvi_1082 at 1243.729 kb on + strand, within Echvi_1082 at 1243.774 kb on - strand, within Echvi_1082 at 1243.802 kb on + strand, within Echvi_1082 at 1243.802 kb on + strand, within Echvi_1082 at 1243.802 kb on + strand, within Echvi_1082 at 1243.803 kb on - strand, within Echvi_1082 at 1243.804 kb on + strand, within Echvi_1082 at 1243.804 kb on + strand, within Echvi_1082 at 1243.804 kb on + strand, within Echvi_1082 at 1243.804 kb on + strand, within Echvi_1082 at 1243.805 kb on - strand, within Echvi_1082 at 1243.805 kb on - strand, within Echvi_1082 at 1243.935 kb on - strand, within Echvi_1082 at 1243.936 kb on + strand, within Echvi_1082 at 1243.936 kb on + strand, within Echvi_1082 at 1243.936 kb on + strand, within Echvi_1082 at 1243.936 kb on + strand, within Echvi_1082 at 1244.020 kb on - strand, within Echvi_1082 at 1244.025 kb on + strand, within Echvi_1082 at 1244.025 kb on + strand, within Echvi_1082 at 1244.026 kb on - strand, within Echvi_1082 at 1244.059 kb on - strand, within Echvi_1082 at 1244.166 kb on + strand at 1244.166 kb on + strand at 1244.181 kb on - strand at 1244.186 kb on + strand at 1244.186 kb on + strand at 1244.187 kb on - strand at 1244.285 kb on + strand at 1244.313 kb on + strand at 1244.314 kb on - strand at 1244.319 kb on + strand at 1244.319 kb on + strand at 1244.319 kb on + strand at 1244.320 kb on - strand at 1244.325 kb on + strand at 1244.325 kb on + strand at 1244.325 kb on + strand at 1244.325 kb on + strand at 1244.326 kb on - strand at 1244.414 kb on - strand, within Echvi_1083 at 1244.414 kb on - strand, within Echvi_1083 at 1244.425 kb on - strand, within Echvi_1083 at 1244.479 kb on + strand, within Echvi_1083 at 1244.521 kb on + strand, within Echvi_1083 at 1244.521 kb on + strand, within Echvi_1083 at 1244.521 kb on + strand, within Echvi_1083 at 1244.546 kb on + strand, within Echvi_1083 at 1244.551 kb on + strand, within Echvi_1083 at 1244.552 kb on - strand, within Echvi_1083 at 1244.677 kb on + strand, within Echvi_1083 at 1244.706 kb on + strand, within Echvi_1083 at 1244.707 kb on - strand, within Echvi_1083 at 1244.707 kb on - strand, within Echvi_1083 at 1244.805 kb on - strand, within Echvi_1083 at 1245.000 kb on - strand, within Echvi_1083 at 1245.000 kb on - strand, within Echvi_1083 at 1245.001 kb on + strand, within Echvi_1083 at 1245.001 kb on + strand, within Echvi_1083 at 1245.002 kb on - strand, within Echvi_1083 at 1245.002 kb on - strand, within Echvi_1083 at 1245.002 kb on - strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.007 kb on + strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.008 kb on - strand, within Echvi_1083 at 1245.011 kb on + strand, within Echvi_1083 at 1245.012 kb on - strand, within Echvi_1083 at 1245.012 kb on - strand, within Echvi_1083
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 1,242,491 - -0.0 1,242,509 + -0.5 1,242,510 - -0.6 1,242,513 - -1.5 1,242,513 - +2.6 1,242,513 - -0.1 1,242,515 - +0.2 1,242,595 + Echvi_1080 0.25 +2.0 1,242,596 - Echvi_1080 0.26 +1.5 1,242,610 + Echvi_1080 0.30 +1.0 1,242,619 + Echvi_1080 0.32 -0.0 1,242,619 + Echvi_1080 0.32 +0.8 1,242,619 + Echvi_1080 0.32 -0.4 1,242,656 + Echvi_1080 0.44 +1.4 1,242,736 + Echvi_1080 0.68 -0.8 1,242,818 - +0.1 1,242,818 - -0.4 1,242,858 - +0.2 1,242,915 + Echvi_1081 0.10 -0.1 1,243,021 + Echvi_1081 0.30 +0.7 1,243,022 - Echvi_1081 0.30 -0.6 1,243,022 - Echvi_1081 0.30 -1.1 1,243,115 + Echvi_1081 0.47 +0.4 1,243,116 - Echvi_1081 0.47 +0.1 1,243,124 + Echvi_1081 0.48 -0.0 1,243,125 - Echvi_1081 0.48 +0.6 1,243,156 + Echvi_1081 0.54 +0.2 1,243,212 + Echvi_1081 0.64 -1.1 1,243,213 - Echvi_1081 0.64 -0.5 1,243,213 - Echvi_1081 0.64 -0.4 1,243,213 - Echvi_1081 0.64 -1.0 1,243,223 + Echvi_1081 0.66 -2.0 1,243,321 + Echvi_1081 0.84 -0.2 1,243,321 + Echvi_1081 0.84 -0.3 1,243,343 - Echvi_1081 0.88 +1.0 1,243,343 - Echvi_1081 0.88 +0.4 1,243,343 - Echvi_1081 0.88 +0.1 1,243,363 + -0.0 1,243,399 + +0.3 1,243,572 + Echvi_1082 0.24 +0.7 1,243,585 + Echvi_1082 0.25 +0.7 1,243,585 + Echvi_1082 0.25 -0.3 1,243,585 + Echvi_1082 0.25 -0.5 1,243,585 + Echvi_1082 0.25 -0.3 1,243,585 + Echvi_1082 0.25 -0.5 1,243,586 - Echvi_1082 0.25 -0.4 1,243,586 - Echvi_1082 0.25 +0.2 1,243,661 + Echvi_1082 0.34 -0.4 1,243,662 - Echvi_1082 0.35 +0.2 1,243,662 - Echvi_1082 0.35 -0.4 1,243,684 + Echvi_1082 0.37 +1.3 1,243,684 + Echvi_1082 0.37 +0.1 1,243,685 - Echvi_1082 0.37 +3.3 1,243,685 - Echvi_1082 0.37 +0.6 1,243,700 + Echvi_1082 0.39 +0.9 1,243,729 + Echvi_1082 0.43 +1.2 1,243,729 + Echvi_1082 0.43 +0.6 1,243,774 - Echvi_1082 0.48 -1.0 1,243,802 + Echvi_1082 0.52 +0.3 1,243,802 + Echvi_1082 0.52 +0.5 1,243,802 + Echvi_1082 0.52 -0.6 1,243,803 - Echvi_1082 0.52 +0.7 1,243,804 + Echvi_1082 0.52 +0.7 1,243,804 + Echvi_1082 0.52 -0.9 1,243,804 + Echvi_1082 0.52 +1.0 1,243,804 + Echvi_1082 0.52 -0.0 1,243,805 - Echvi_1082 0.52 +1.3 1,243,805 - Echvi_1082 0.52 +0.7 1,243,935 - Echvi_1082 0.68 -0.3 1,243,936 + Echvi_1082 0.68 -1.2 1,243,936 + Echvi_1082 0.68 -0.3 1,243,936 + Echvi_1082 0.68 -0.2 1,243,936 + Echvi_1082 0.68 -0.3 1,244,020 - Echvi_1082 0.78 -0.7 1,244,025 + Echvi_1082 0.79 +1.0 1,244,025 + Echvi_1082 0.79 -0.4 1,244,026 - Echvi_1082 0.79 +1.1 1,244,059 - Echvi_1082 0.83 +0.8 1,244,166 + +0.3 1,244,166 + -0.9 1,244,181 - -2.1 1,244,186 + -0.2 1,244,186 + -0.3 1,244,187 - -0.2 1,244,285 + -0.3 1,244,313 + +0.5 1,244,314 - +0.8 1,244,319 + -1.1 1,244,319 + +0.4 1,244,319 + +0.6 1,244,320 - -1.1 1,244,325 + -0.0 1,244,325 + +0.9 1,244,325 + +1.0 1,244,325 + -0.1 1,244,326 - +0.1 1,244,414 - Echvi_1083 0.12 +1.0 1,244,414 - Echvi_1083 0.12 -0.8 1,244,425 - Echvi_1083 0.12 -1.2 1,244,479 + Echvi_1083 0.15 +1.1 1,244,521 + Echvi_1083 0.18 -0.2 1,244,521 + Echvi_1083 0.18 +1.7 1,244,521 + Echvi_1083 0.18 +0.3 1,244,546 + Echvi_1083 0.19 +0.4 1,244,551 + Echvi_1083 0.20 +0.9 1,244,552 - Echvi_1083 0.20 -0.0 1,244,677 + Echvi_1083 0.27 +0.4 1,244,706 + Echvi_1083 0.29 +1.0 1,244,707 - Echvi_1083 0.29 -0.1 1,244,707 - Echvi_1083 0.29 -0.6 1,244,805 - Echvi_1083 0.35 -0.7 1,245,000 - Echvi_1083 0.46 +0.4 1,245,000 - Echvi_1083 0.46 -0.1 1,245,001 + Echvi_1083 0.46 +0.2 1,245,001 + Echvi_1083 0.46 -1.6 1,245,002 - Echvi_1083 0.46 +0.7 1,245,002 - Echvi_1083 0.46 +1.0 1,245,002 - Echvi_1083 0.46 +0.5 1,245,007 + Echvi_1083 0.47 +0.8 1,245,007 + Echvi_1083 0.47 -0.6 1,245,007 + Echvi_1083 0.47 -0.9 1,245,007 + Echvi_1083 0.47 -0.0 1,245,007 + Echvi_1083 0.47 +0.1 1,245,007 + Echvi_1083 0.47 -1.2 1,245,007 + Echvi_1083 0.47 +0.5 1,245,008 - Echvi_1083 0.47 -0.3 1,245,008 - Echvi_1083 0.47 -0.3 1,245,008 - Echvi_1083 0.47 +0.4 1,245,008 - Echvi_1083 0.47 +0.3 1,245,008 - Echvi_1083 0.47 -0.2 1,245,008 - Echvi_1083 0.47 -1.2 1,245,008 - Echvi_1083 0.47 -0.0 1,245,008 - Echvi_1083 0.47 +0.0 1,245,008 - Echvi_1083 0.47 +0.8 1,245,008 - Echvi_1083 0.47 -0.7 1,245,011 + Echvi_1083 0.47 -0.7 1,245,012 - Echvi_1083 0.47 -0.5 1,245,012 - Echvi_1083 0.47 -1.5
Or see this region's nucleotide sequence