Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0982 and Echvi_0983 are separated by 96 nucleotides Echvi_0983 and Echvi_0984 are separated by 66 nucleotides Echvi_0984 and Echvi_0985 are separated by 5 nucleotides
Echvi_0982: Echvi_0982 - sulfate adenylyltransferase, large subunit, at 1,140,214 to 1,141,473
_0982
Echvi_0983: Echvi_0983 - sulfate adenylyltransferase, small subunit, at 1,141,570 to 1,142,469
_0983
Echvi_0984: Echvi_0984 - phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase, at 1,142,536 to 1,143,237
_0984
Echvi_0985: Echvi_0985 - Predicted membrane protein, at 1,143,243 to 1,143,488
_0985
Position (kb)
1141
1142
1143 Strain fitness (log2 ratio)
-1
0
1 at 1141.545 kb on - strand at 1141.545 kb on - strand at 1141.552 kb on - strand at 1141.552 kb on - strand at 1142.475 kb on - strand at 1142.475 kb on - strand at 1142.478 kb on - strand at 1142.506 kb on - strand at 1142.543 kb on - strand at 1142.545 kb on - strand at 1143.245 kb on - strand at 1143.292 kb on - strand, within Echvi_0985 at 1143.292 kb on - strand, within Echvi_0985 at 1143.292 kb on - strand, within Echvi_0985 at 1143.292 kb on - strand, within Echvi_0985 at 1143.310 kb on - strand, within Echvi_0985 at 1143.310 kb on - strand, within Echvi_0985 at 1143.310 kb on - strand, within Echvi_0985 at 1143.310 kb on - strand, within Echvi_0985 at 1143.310 kb on - strand, within Echvi_0985 at 1143.362 kb on - strand, within Echvi_0985 at 1143.362 kb on - strand, within Echvi_0985 at 1143.427 kb on - strand, within Echvi_0985 at 1143.427 kb on - strand, within Echvi_0985
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 1,141,545 - +0.2 1,141,545 - +0.5 1,141,552 - +0.1 1,141,552 - +0.3 1,142,475 - +0.3 1,142,475 - -0.0 1,142,478 - +1.0 1,142,506 - -1.3 1,142,543 - +0.2 1,142,545 - -0.9 1,143,245 - +1.0 1,143,292 - Echvi_0985 0.20 +0.1 1,143,292 - Echvi_0985 0.20 +0.6 1,143,292 - Echvi_0985 0.20 +1.5 1,143,292 - Echvi_0985 0.20 +0.7 1,143,310 - Echvi_0985 0.27 -0.6 1,143,310 - Echvi_0985 0.27 +0.7 1,143,310 - Echvi_0985 0.27 +1.2 1,143,310 - Echvi_0985 0.27 +0.5 1,143,310 - Echvi_0985 0.27 +0.3 1,143,362 - Echvi_0985 0.48 +0.9 1,143,362 - Echvi_0985 0.48 +1.4 1,143,427 - Echvi_0985 0.75 +1.4 1,143,427 - Echvi_0985 0.75 +1.2
Or see this region's nucleotide sequence