Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0982

Experiment: m.b. Dimethyl Sulfoxide 12 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0981 and Echvi_0982 are separated by 53 nucleotidesEchvi_0982 and Echvi_0983 are separated by 96 nucleotides Echvi_0981: Echvi_0981 - Sulfite reductase, beta subunit (hemoprotein), at 1,138,058 to 1,140,160 _0981 Echvi_0982: Echvi_0982 - sulfate adenylyltransferase, large subunit, at 1,140,214 to 1,141,473 _0982 Echvi_0983: Echvi_0983 - sulfate adenylyltransferase, small subunit, at 1,141,570 to 1,142,469 _0983 Position (kb) 1140 1141 1142Strain fitness (log2 ratio) -1 0 1at 1139.788 kb on + strand, within Echvi_0981at 1139.792 kb on - strand, within Echvi_0981at 1140.065 kb on + strandat 1140.065 kb on + strandat 1140.137 kb on + strandat 1140.161 kb on - strandat 1140.177 kb on - strandat 1140.216 kb on - strandat 1140.216 kb on - strandat 1141.545 kb on - strandat 1141.545 kb on - strandat 1141.552 kb on - strandat 1141.552 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol%
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1,139,788 + Echvi_0981 0.82 -0.1
1,139,792 - Echvi_0981 0.82 -0.3
1,140,065 + +0.0
1,140,065 + +0.4
1,140,137 + +1.4
1,140,161 - +0.3
1,140,177 - -1.0
1,140,216 - +0.1
1,140,216 - +0.1
1,141,545 - +0.2
1,141,545 - +0.5
1,141,552 - +0.1
1,141,552 - +0.3

Or see this region's nucleotide sequence