Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0969 and Echvi_0970 are separated by 181 nucleotides Echvi_0970 and Echvi_0971 are separated by 129 nucleotides Echvi_0971 and Echvi_0972 are separated by 25 nucleotides
Echvi_0969: Echvi_0969 - Domain of unknown function (DUF1083)., at 1,121,833 to 1,122,897
_0969
Echvi_0970: Echvi_0970 - 3-methyladenine DNA glycosylase, at 1,123,079 to 1,123,681
_0970
Echvi_0971: Echvi_0971 - Predicted membrane protein, at 1,123,811 to 1,124,191
_0971
Echvi_0972: Echvi_0972 - hypothetical protein, at 1,124,217 to 1,124,921
_0972
Position (kb)
1123
1124
1125 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1122.822 kb on + strand at 1122.822 kb on + strand at 1122.864 kb on + strand at 1122.865 kb on - strand at 1122.895 kb on + strand at 1122.896 kb on - strand at 1122.905 kb on - strand at 1122.998 kb on + strand at 1123.031 kb on + strand at 1123.031 kb on + strand at 1123.032 kb on - strand at 1123.049 kb on + strand at 1123.050 kb on - strand at 1123.145 kb on + strand, within Echvi_0970 at 1123.146 kb on - strand, within Echvi_0970 at 1123.154 kb on + strand, within Echvi_0970 at 1123.155 kb on - strand, within Echvi_0970 at 1123.301 kb on + strand, within Echvi_0970 at 1123.301 kb on + strand, within Echvi_0970 at 1123.302 kb on - strand, within Echvi_0970 at 1123.302 kb on - strand, within Echvi_0970 at 1123.303 kb on + strand, within Echvi_0970 at 1123.304 kb on - strand, within Echvi_0970 at 1123.304 kb on - strand, within Echvi_0970 at 1123.327 kb on + strand, within Echvi_0970 at 1123.327 kb on + strand, within Echvi_0970 at 1123.327 kb on + strand, within Echvi_0970 at 1123.328 kb on - strand, within Echvi_0970 at 1123.328 kb on - strand, within Echvi_0970 at 1123.399 kb on + strand, within Echvi_0970 at 1123.400 kb on - strand, within Echvi_0970 at 1123.451 kb on + strand, within Echvi_0970 at 1123.451 kb on + strand, within Echvi_0970 at 1123.452 kb on - strand, within Echvi_0970 at 1123.452 kb on - strand, within Echvi_0970 at 1123.454 kb on - strand, within Echvi_0970 at 1123.454 kb on - strand, within Echvi_0970 at 1123.474 kb on + strand, within Echvi_0970 at 1123.474 kb on + strand, within Echvi_0970 at 1123.586 kb on - strand, within Echvi_0970 at 1123.595 kb on + strand, within Echvi_0970 at 1123.595 kb on + strand, within Echvi_0970 at 1123.596 kb on - strand, within Echvi_0970 at 1123.604 kb on - strand, within Echvi_0970 at 1123.604 kb on - strand, within Echvi_0970 at 1123.662 kb on + strand at 1123.688 kb on + strand at 1123.689 kb on - strand at 1123.867 kb on + strand, within Echvi_0971 at 1123.868 kb on - strand, within Echvi_0971 at 1123.898 kb on + strand, within Echvi_0971 at 1123.899 kb on - strand, within Echvi_0971 at 1123.932 kb on + strand, within Echvi_0971 at 1123.933 kb on - strand, within Echvi_0971 at 1123.933 kb on - strand, within Echvi_0971 at 1123.954 kb on + strand, within Echvi_0971 at 1123.987 kb on + strand, within Echvi_0971 at 1123.987 kb on + strand, within Echvi_0971 at 1123.987 kb on + strand, within Echvi_0971 at 1123.987 kb on + strand, within Echvi_0971 at 1124.011 kb on - strand, within Echvi_0971 at 1124.019 kb on + strand, within Echvi_0971 at 1124.019 kb on + strand, within Echvi_0971 at 1124.020 kb on - strand, within Echvi_0971 at 1124.024 kb on + strand at 1124.072 kb on + strand, within Echvi_0971 at 1124.081 kb on + strand, within Echvi_0971 at 1124.081 kb on + strand, within Echvi_0971 at 1124.085 kb on - strand, within Echvi_0971 at 1124.085 kb on - strand, within Echvi_0971 at 1124.160 kb on + strand at 1124.181 kb on + strand at 1124.196 kb on + strand at 1124.196 kb on + strand at 1124.197 kb on - strand at 1124.198 kb on + strand at 1124.198 kb on + strand at 1124.199 kb on - strand at 1124.199 kb on - strand at 1124.204 kb on + strand at 1124.205 kb on - strand at 1124.235 kb on + strand at 1124.235 kb on + strand at 1124.303 kb on + strand, within Echvi_0972 at 1124.303 kb on + strand, within Echvi_0972 at 1124.303 kb on + strand, within Echvi_0972 at 1124.303 kb on + strand, within Echvi_0972 at 1124.303 kb on + strand, within Echvi_0972 at 1124.304 kb on - strand, within Echvi_0972 at 1124.304 kb on - strand, within Echvi_0972 at 1124.305 kb on + strand, within Echvi_0972 at 1124.360 kb on + strand, within Echvi_0972 at 1124.360 kb on + strand, within Echvi_0972 at 1124.416 kb on + strand, within Echvi_0972 at 1124.430 kb on + strand, within Echvi_0972 at 1124.435 kb on + strand, within Echvi_0972 at 1124.436 kb on - strand, within Echvi_0972 at 1124.436 kb on - strand, within Echvi_0972 at 1124.436 kb on - strand, within Echvi_0972 at 1124.460 kb on + strand, within Echvi_0972 at 1124.461 kb on - strand, within Echvi_0972 at 1124.480 kb on + strand, within Echvi_0972 at 1124.480 kb on + strand, within Echvi_0972 at 1124.481 kb on - strand, within Echvi_0972 at 1124.481 kb on - strand, within Echvi_0972 at 1124.481 kb on - strand, within Echvi_0972 at 1124.503 kb on + strand, within Echvi_0972 at 1124.503 kb on + strand, within Echvi_0972 at 1124.504 kb on - strand, within Echvi_0972 at 1124.504 kb on - strand, within Echvi_0972 at 1124.562 kb on - strand, within Echvi_0972 at 1124.581 kb on - strand, within Echvi_0972 at 1124.581 kb on - strand, within Echvi_0972 at 1124.610 kb on + strand, within Echvi_0972 at 1124.654 kb on + strand, within Echvi_0972 at 1124.654 kb on + strand, within Echvi_0972 at 1124.654 kb on + strand, within Echvi_0972 at 1124.655 kb on - strand, within Echvi_0972 at 1124.658 kb on + strand, within Echvi_0972 at 1124.658 kb on + strand, within Echvi_0972 at 1124.658 kb on + strand, within Echvi_0972 at 1124.658 kb on + strand, within Echvi_0972 at 1124.659 kb on - strand, within Echvi_0972 at 1124.665 kb on + strand, within Echvi_0972 at 1124.665 kb on + strand, within Echvi_0972 at 1124.665 kb on + strand, within Echvi_0972 at 1124.665 kb on + strand, within Echvi_0972 at 1124.665 kb on + strand, within Echvi_0972 at 1124.669 kb on - strand, within Echvi_0972 at 1124.678 kb on + strand, within Echvi_0972 at 1124.706 kb on + strand, within Echvi_0972 at 1124.713 kb on + strand, within Echvi_0972 at 1124.713 kb on + strand, within Echvi_0972 at 1124.713 kb on + strand, within Echvi_0972 at 1124.713 kb on + strand, within Echvi_0972 at 1124.714 kb on - strand, within Echvi_0972 at 1124.727 kb on + strand, within Echvi_0972 at 1124.727 kb on + strand, within Echvi_0972 at 1124.728 kb on - strand, within Echvi_0972 at 1124.732 kb on + strand, within Echvi_0972 at 1124.783 kb on + strand, within Echvi_0972 at 1124.783 kb on + strand, within Echvi_0972 at 1124.783 kb on + strand, within Echvi_0972 at 1124.783 kb on + strand, within Echvi_0972 at 1124.783 kb on + strand, within Echvi_0972 at 1124.784 kb on - strand, within Echvi_0972 at 1124.803 kb on - strand, within Echvi_0972 at 1124.803 kb on - strand, within Echvi_0972 at 1124.803 kb on - strand, within Echvi_0972 at 1124.815 kb on + strand, within Echvi_0972 at 1124.816 kb on - strand, within Echvi_0972 at 1124.823 kb on - strand, within Echvi_0972 at 1124.823 kb on - strand, within Echvi_0972 at 1124.824 kb on + strand, within Echvi_0972 at 1124.825 kb on - strand, within Echvi_0972 at 1124.856 kb on + strand at 1124.856 kb on + strand at 1124.857 kb on - strand at 1124.857 kb on - strand at 1124.857 kb on - strand at 1124.904 kb on - strand at 1124.930 kb on + strand at 1124.930 kb on + strand at 1124.930 kb on + strand at 1124.931 kb on - strand at 1124.931 kb on - strand at 1124.931 kb on - strand at 1124.931 kb on - strand at 1124.935 kb on + strand at 1124.999 kb on - strand at 1125.016 kb on + strand at 1125.040 kb on - strand at 1125.083 kb on + strand at 1125.084 kb on - strand at 1125.084 kb on - strand at 1125.105 kb on + strand at 1125.105 kb on + strand at 1125.105 kb on + strand at 1125.105 kb on + strand at 1125.106 kb on - strand at 1125.113 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 1,122,822 + -0.6 1,122,822 + -0.6 1,122,864 + +1.2 1,122,865 - +0.0 1,122,895 + -0.6 1,122,896 - +0.0 1,122,905 - -0.8 1,122,998 + +0.4 1,123,031 + -0.4 1,123,031 + +0.5 1,123,032 - -0.3 1,123,049 + -0.8 1,123,050 - -1.2 1,123,145 + Echvi_0970 0.11 -0.7 1,123,146 - Echvi_0970 0.11 +1.0 1,123,154 + Echvi_0970 0.12 -0.3 1,123,155 - Echvi_0970 0.13 -1.0 1,123,301 + Echvi_0970 0.37 +0.1 1,123,301 + Echvi_0970 0.37 -0.6 1,123,302 - Echvi_0970 0.37 +0.2 1,123,302 - Echvi_0970 0.37 -1.0 1,123,303 + Echvi_0970 0.37 +0.4 1,123,304 - Echvi_0970 0.37 +0.8 1,123,304 - Echvi_0970 0.37 +0.3 1,123,327 + Echvi_0970 0.41 +2.0 1,123,327 + Echvi_0970 0.41 +0.2 1,123,327 + Echvi_0970 0.41 -0.3 1,123,328 - Echvi_0970 0.41 +1.1 1,123,328 - Echvi_0970 0.41 -1.1 1,123,399 + Echvi_0970 0.53 +0.8 1,123,400 - Echvi_0970 0.53 -1.0 1,123,451 + Echvi_0970 0.62 -0.8 1,123,451 + Echvi_0970 0.62 +1.0 1,123,452 - Echvi_0970 0.62 -1.3 1,123,452 - Echvi_0970 0.62 -1.3 1,123,454 - Echvi_0970 0.62 -0.7 1,123,454 - Echvi_0970 0.62 +0.7 1,123,474 + Echvi_0970 0.66 -0.5 1,123,474 + Echvi_0970 0.66 +2.0 1,123,586 - Echvi_0970 0.84 -0.8 1,123,595 + Echvi_0970 0.86 -2.1 1,123,595 + Echvi_0970 0.86 -0.0 1,123,596 - Echvi_0970 0.86 +0.1 1,123,604 - Echvi_0970 0.87 -0.4 1,123,604 - Echvi_0970 0.87 +0.6 1,123,662 + +0.1 1,123,688 + +0.8 1,123,689 - +0.1 1,123,867 + Echvi_0971 0.15 +1.9 1,123,868 - Echvi_0971 0.15 +0.1 1,123,898 + Echvi_0971 0.23 +0.8 1,123,899 - Echvi_0971 0.23 -0.1 1,123,932 + Echvi_0971 0.32 +0.9 1,123,933 - Echvi_0971 0.32 -0.5 1,123,933 - Echvi_0971 0.32 +1.4 1,123,954 + Echvi_0971 0.38 +0.2 1,123,987 + Echvi_0971 0.46 +0.0 1,123,987 + Echvi_0971 0.46 -1.6 1,123,987 + Echvi_0971 0.46 +1.3 1,123,987 + Echvi_0971 0.46 +0.5 1,124,011 - Echvi_0971 0.52 +0.2 1,124,019 + Echvi_0971 0.55 +0.8 1,124,019 + Echvi_0971 0.55 -0.4 1,124,020 - Echvi_0971 0.55 +1.0 1,124,024 + -0.6 1,124,072 + Echvi_0971 0.69 +0.1 1,124,081 + Echvi_0971 0.71 -0.6 1,124,081 + Echvi_0971 0.71 +0.3 1,124,085 - Echvi_0971 0.72 +0.7 1,124,085 - Echvi_0971 0.72 +0.3 1,124,160 + +0.6 1,124,181 + +0.2 1,124,196 + +0.0 1,124,196 + +0.5 1,124,197 - +0.1 1,124,198 + +1.3 1,124,198 + -0.1 1,124,199 - -0.3 1,124,199 - -0.2 1,124,204 + +0.8 1,124,205 - +2.0 1,124,235 + +0.6 1,124,235 + -0.8 1,124,303 + Echvi_0972 0.12 +0.2 1,124,303 + Echvi_0972 0.12 +0.9 1,124,303 + Echvi_0972 0.12 +0.3 1,124,303 + Echvi_0972 0.12 -0.4 1,124,303 + Echvi_0972 0.12 -0.1 1,124,304 - Echvi_0972 0.12 +1.0 1,124,304 - Echvi_0972 0.12 -0.7 1,124,305 + Echvi_0972 0.12 -1.0 1,124,360 + Echvi_0972 0.20 -0.0 1,124,360 + Echvi_0972 0.20 -0.1 1,124,416 + Echvi_0972 0.28 -0.2 1,124,430 + Echvi_0972 0.30 -0.6 1,124,435 + Echvi_0972 0.31 +1.0 1,124,436 - Echvi_0972 0.31 -1.0 1,124,436 - Echvi_0972 0.31 -0.1 1,124,436 - Echvi_0972 0.31 +0.4 1,124,460 + Echvi_0972 0.34 -0.2 1,124,461 - Echvi_0972 0.35 -0.0 1,124,480 + Echvi_0972 0.37 -1.4 1,124,480 + Echvi_0972 0.37 -0.1 1,124,481 - Echvi_0972 0.37 +0.1 1,124,481 - Echvi_0972 0.37 +1.4 1,124,481 - Echvi_0972 0.37 -0.2 1,124,503 + Echvi_0972 0.41 +0.5 1,124,503 + Echvi_0972 0.41 +0.7 1,124,504 - Echvi_0972 0.41 -0.2 1,124,504 - Echvi_0972 0.41 +0.3 1,124,562 - Echvi_0972 0.49 +0.4 1,124,581 - Echvi_0972 0.52 +4.3 1,124,581 - Echvi_0972 0.52 +0.3 1,124,610 + Echvi_0972 0.56 -0.1 1,124,654 + Echvi_0972 0.62 +0.6 1,124,654 + Echvi_0972 0.62 -0.0 1,124,654 + Echvi_0972 0.62 -0.0 1,124,655 - Echvi_0972 0.62 +0.3 1,124,658 + Echvi_0972 0.63 +0.3 1,124,658 + Echvi_0972 0.63 +1.2 1,124,658 + Echvi_0972 0.63 +0.1 1,124,658 + Echvi_0972 0.63 -0.6 1,124,659 - Echvi_0972 0.63 -0.3 1,124,665 + Echvi_0972 0.64 +0.1 1,124,665 + Echvi_0972 0.64 -0.2 1,124,665 + Echvi_0972 0.64 -0.7 1,124,665 + Echvi_0972 0.64 +0.4 1,124,665 + Echvi_0972 0.64 +0.7 1,124,669 - Echvi_0972 0.64 -0.7 1,124,678 + Echvi_0972 0.65 +0.7 1,124,706 + Echvi_0972 0.69 -0.6 1,124,713 + Echvi_0972 0.70 -2.1 1,124,713 + Echvi_0972 0.70 +0.5 1,124,713 + Echvi_0972 0.70 +1.6 1,124,713 + Echvi_0972 0.70 +0.4 1,124,714 - Echvi_0972 0.70 +2.0 1,124,727 + Echvi_0972 0.72 -0.7 1,124,727 + Echvi_0972 0.72 +0.3 1,124,728 - Echvi_0972 0.72 +0.1 1,124,732 + Echvi_0972 0.73 +0.4 1,124,783 + Echvi_0972 0.80 -0.2 1,124,783 + Echvi_0972 0.80 -0.3 1,124,783 + Echvi_0972 0.80 +0.2 1,124,783 + Echvi_0972 0.80 -0.8 1,124,783 + Echvi_0972 0.80 -0.3 1,124,784 - Echvi_0972 0.80 -1.0 1,124,803 - Echvi_0972 0.83 -0.6 1,124,803 - Echvi_0972 0.83 -1.5 1,124,803 - Echvi_0972 0.83 +0.4 1,124,815 + Echvi_0972 0.85 -0.0 1,124,816 - Echvi_0972 0.85 -1.2 1,124,823 - Echvi_0972 0.86 -0.2 1,124,823 - Echvi_0972 0.86 +0.4 1,124,824 + Echvi_0972 0.86 +0.4 1,124,825 - Echvi_0972 0.86 +0.1 1,124,856 + +0.7 1,124,856 + -0.4 1,124,857 - +1.0 1,124,857 - -0.2 1,124,857 - -2.2 1,124,904 - -1.1 1,124,930 + +0.3 1,124,930 + +1.0 1,124,930 + +0.2 1,124,931 - +0.4 1,124,931 - -1.4 1,124,931 - -0.5 1,124,931 - +2.0 1,124,935 + +0.1 1,124,999 - -0.5 1,125,016 + -2.1 1,125,040 - +1.6 1,125,083 + +0.6 1,125,084 - -1.8 1,125,084 - +0.4 1,125,105 + -0.3 1,125,105 + -1.0 1,125,105 + -0.8 1,125,105 + +1.6 1,125,106 - +0.5 1,125,113 + -0.1
Or see this region's nucleotide sequence