Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0651 and Echvi_0652 are separated by 137 nucleotides Echvi_0652 and Echvi_0653 are separated by 3 nucleotides
Echvi_0651: Echvi_0651 - Outer membrane protein, at 735,190 to 735,750
_0651
Echvi_0652: Echvi_0652 - Outer membrane protein, at 735,888 to 736,436
_0652
Echvi_0653: Echvi_0653 - Outer membrane protein/protective antigen OMA87, at 736,440 to 739,154
_0653
Position (kb)
735
736
737 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 734.917 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.927 kb on - strand at 734.929 kb on + strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.940 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.981 kb on - strand at 734.981 kb on - strand at 734.991 kb on - strand at 734.991 kb on - strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.033 kb on - strand at 735.039 kb on + strand at 735.039 kb on + strand at 735.040 kb on - strand at 735.043 kb on + strand at 735.055 kb on + strand at 735.055 kb on + strand at 735.061 kb on - strand at 735.175 kb on + strand at 735.772 kb on - strand at 735.981 kb on - strand, within Echvi_0652 at 735.983 kb on - strand, within Echvi_0652 at 735.983 kb on - strand, within Echvi_0652 at 736.008 kb on - strand, within Echvi_0652 at 736.017 kb on - strand, within Echvi_0652 at 736.106 kb on - strand, within Echvi_0652 at 736.106 kb on - strand, within Echvi_0652 at 736.109 kb on - strand, within Echvi_0652 at 736.120 kb on - strand, within Echvi_0652 at 736.142 kb on - strand, within Echvi_0652 at 736.146 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.301 kb on + strand, within Echvi_0652 at 736.341 kb on + strand, within Echvi_0652 at 736.342 kb on - strand, within Echvi_0652 at 736.349 kb on - strand, within Echvi_0652 at 736.417 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 734,917 + +0.9 734,926 + +1.3 734,926 + -0.2 734,926 + -0.5 734,927 - +0.9 734,929 + -0.5 734,930 - -0.1 734,930 - -1.6 734,930 - +0.1 734,940 + -1.0 734,980 + -0.1 734,980 + -0.2 734,980 + +0.7 734,981 - +0.9 734,981 - +0.9 734,991 - +0.0 734,991 - +0.9 735,032 + +1.0 735,032 + -1.2 735,032 + -0.3 735,032 + -0.5 735,033 - +0.4 735,039 + +0.1 735,039 + -0.6 735,040 - -1.8 735,043 + -0.6 735,055 + -0.4 735,055 + +0.8 735,061 - -0.2 735,175 + -2.0 735,772 - +0.5 735,981 - Echvi_0652 0.17 -0.1 735,983 - Echvi_0652 0.17 -0.6 735,983 - Echvi_0652 0.17 +0.6 736,008 - Echvi_0652 0.22 -0.3 736,017 - Echvi_0652 0.23 -0.1 736,106 - Echvi_0652 0.40 +2.3 736,106 - Echvi_0652 0.40 +2.0 736,109 - Echvi_0652 0.40 +0.5 736,120 - Echvi_0652 0.42 +1.9 736,142 - Echvi_0652 0.46 +0.5 736,146 - Echvi_0652 0.47 +0.8 736,193 - Echvi_0652 0.56 +0.4 736,193 - Echvi_0652 0.56 +0.4 736,193 - Echvi_0652 0.56 +0.2 736,193 - Echvi_0652 0.56 +1.8 736,238 - Echvi_0652 0.64 +0.2 736,238 - Echvi_0652 0.64 +1.5 736,238 - Echvi_0652 0.64 +0.7 736,238 - Echvi_0652 0.64 +0.2 736,301 + Echvi_0652 0.75 -2.9 736,341 + Echvi_0652 0.83 -1.8 736,342 - Echvi_0652 0.83 +0.3 736,349 - Echvi_0652 0.84 -0.2 736,417 - +0.9
Or see this region's nucleotide sequence