Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0550 and Echvi_0551 are separated by 280 nucleotides Echvi_0551 and Echvi_0552 are separated by 25 nucleotides Echvi_0552 and Echvi_0553 overlap by 52 nucleotides Echvi_0553 and Echvi_0554 are separated by 874 nucleotides
Echvi_0550: Echvi_0550 - hypothetical protein, at 621,095 to 622,906
_0550
Echvi_0551: Echvi_0551 - hypothetical protein, at 623,187 to 623,294
_0551
Echvi_0552: Echvi_0552 - hypothetical protein, at 623,320 to 623,439
_0552
Echvi_0553: Echvi_0553 - hypothetical protein, at 623,388 to 623,882
_0553
Echvi_0554: Echvi_0554 - tRNA, at 624,757 to 624,830
_0554
Position (kb) 623
624 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 622.390 kb on + strand, within Echvi_0550 at 622.390 kb on + strand, within Echvi_0550 at 622.398 kb on + strand, within Echvi_0550 at 622.399 kb on - strand, within Echvi_0550 at 622.406 kb on + strand, within Echvi_0550 at 622.406 kb on + strand, within Echvi_0550 at 622.407 kb on - strand, within Echvi_0550 at 622.426 kb on + strand, within Echvi_0550 at 622.426 kb on + strand, within Echvi_0550 at 622.427 kb on - strand, within Echvi_0550 at 622.427 kb on - strand, within Echvi_0550 at 622.427 kb on - strand, within Echvi_0550 at 622.427 kb on - strand, within Echvi_0550 at 622.427 kb on - strand, within Echvi_0550 at 622.428 kb on + strand, within Echvi_0550 at 622.428 kb on + strand, within Echvi_0550 at 622.429 kb on - strand, within Echvi_0550 at 622.429 kb on - strand, within Echvi_0550 at 622.429 kb on - strand, within Echvi_0550 at 622.450 kb on + strand, within Echvi_0550 at 622.450 kb on + strand, within Echvi_0550 at 622.451 kb on - strand, within Echvi_0550 at 622.451 kb on - strand, within Echvi_0550 at 622.451 kb on - strand, within Echvi_0550 at 622.523 kb on - strand, within Echvi_0550 at 622.537 kb on + strand, within Echvi_0550 at 622.559 kb on + strand, within Echvi_0550 at 622.559 kb on + strand, within Echvi_0550 at 622.560 kb on - strand, within Echvi_0550 at 622.560 kb on - strand, within Echvi_0550 at 622.579 kb on + strand, within Echvi_0550 at 622.580 kb on - strand, within Echvi_0550 at 622.580 kb on - strand, within Echvi_0550 at 622.580 kb on - strand, within Echvi_0550 at 622.604 kb on + strand, within Echvi_0550 at 622.605 kb on - strand, within Echvi_0550 at 622.622 kb on - strand, within Echvi_0550 at 622.647 kb on - strand, within Echvi_0550 at 622.748 kb on + strand at 622.749 kb on - strand at 622.866 kb on - strand at 622.882 kb on + strand at 623.006 kb on + strand at 623.006 kb on + strand at 623.071 kb on - strand at 623.073 kb on + strand at 623.073 kb on + strand at 623.073 kb on + strand at 623.074 kb on - strand at 623.107 kb on + strand at 623.188 kb on + strand at 623.188 kb on + strand at 623.189 kb on - strand at 623.189 kb on - strand at 623.208 kb on + strand, within Echvi_0551 at 623.209 kb on - strand, within Echvi_0551 at 623.214 kb on + strand, within Echvi_0551 at 623.225 kb on - strand, within Echvi_0551 at 623.225 kb on - strand, within Echvi_0551 at 623.225 kb on - strand, within Echvi_0551 at 623.225 kb on - strand, within Echvi_0551 at 623.225 kb on - strand, within Echvi_0551 at 623.228 kb on + strand, within Echvi_0551 at 623.228 kb on + strand, within Echvi_0551 at 623.229 kb on - strand, within Echvi_0551 at 623.290 kb on - strand at 623.309 kb on + strand at 623.382 kb on - strand, within Echvi_0552 at 623.432 kb on + strand at 623.479 kb on + strand, within Echvi_0553 at 623.541 kb on - strand, within Echvi_0553 at 623.568 kb on - strand, within Echvi_0553 at 623.603 kb on - strand, within Echvi_0553 at 623.611 kb on + strand, within Echvi_0553 at 623.612 kb on - strand, within Echvi_0553 at 623.612 kb on - strand, within Echvi_0553 at 623.684 kb on - strand, within Echvi_0553 at 623.706 kb on - strand, within Echvi_0553 at 623.706 kb on - strand, within Echvi_0553 at 623.713 kb on + strand, within Echvi_0553 at 623.713 kb on + strand, within Echvi_0553 at 623.714 kb on - strand, within Echvi_0553 at 623.780 kb on + strand, within Echvi_0553 at 623.780 kb on + strand, within Echvi_0553 at 623.781 kb on - strand, within Echvi_0553 at 623.781 kb on - strand, within Echvi_0553 at 623.781 kb on - strand, within Echvi_0553 at 623.781 kb on - strand, within Echvi_0553 at 623.782 kb on + strand, within Echvi_0553 at 623.782 kb on + strand, within Echvi_0553 at 623.783 kb on - strand, within Echvi_0553 at 623.783 kb on - strand, within Echvi_0553 at 623.847 kb on + strand at 623.847 kb on + strand at 623.847 kb on + strand at 623.848 kb on - strand at 623.848 kb on - strand at 623.848 kb on - strand at 623.848 kb on - strand at 623.849 kb on + strand at 623.850 kb on - strand at 623.850 kb on - strand at 623.859 kb on - strand at 623.928 kb on + strand at 623.929 kb on - strand at 623.929 kb on - strand at 623.929 kb on - strand at 623.939 kb on + strand at 623.960 kb on + strand at 623.960 kb on + strand at 623.960 kb on + strand at 623.961 kb on - strand at 623.961 kb on - strand at 623.967 kb on + strand at 624.010 kb on - strand at 624.019 kb on + strand at 624.019 kb on + strand at 624.019 kb on + strand at 624.019 kb on + strand at 624.028 kb on + strand at 624.075 kb on - strand at 624.079 kb on + strand at 624.080 kb on - strand at 624.080 kb on - strand at 624.140 kb on - strand at 624.143 kb on + strand at 624.144 kb on - strand at 624.160 kb on - strand at 624.164 kb on - strand at 624.212 kb on - strand at 624.212 kb on - strand at 624.212 kb on - strand at 624.224 kb on - strand at 624.224 kb on - strand at 624.224 kb on - strand at 624.224 kb on - strand at 624.224 kb on - strand at 624.227 kb on + strand at 624.227 kb on + strand at 624.227 kb on + strand at 624.277 kb on - strand at 624.287 kb on - strand at 624.287 kb on - strand at 624.287 kb on - strand at 624.296 kb on - strand at 624.316 kb on + strand at 624.316 kb on + strand at 624.316 kb on + strand at 624.317 kb on - strand at 624.318 kb on + strand at 624.318 kb on + strand at 624.318 kb on + strand at 624.323 kb on + strand at 624.323 kb on + strand at 624.323 kb on + strand at 624.344 kb on - strand at 624.369 kb on - strand at 624.427 kb on + strand at 624.516 kb on + strand at 624.526 kb on + strand at 624.550 kb on - strand at 624.581 kb on + strand at 624.608 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 622,390 + Echvi_0550 0.71 -0.7 622,390 + Echvi_0550 0.71 +0.9 622,398 + Echvi_0550 0.72 +0.2 622,399 - Echvi_0550 0.72 -0.4 622,406 + Echvi_0550 0.72 +0.4 622,406 + Echvi_0550 0.72 +0.1 622,407 - Echvi_0550 0.72 -0.8 622,426 + Echvi_0550 0.73 -1.2 622,426 + Echvi_0550 0.73 +0.5 622,427 - Echvi_0550 0.74 +0.1 622,427 - Echvi_0550 0.74 -0.8 622,427 - Echvi_0550 0.74 +0.1 622,427 - Echvi_0550 0.74 +1.0 622,427 - Echvi_0550 0.74 +0.7 622,428 + Echvi_0550 0.74 -2.0 622,428 + Echvi_0550 0.74 +1.2 622,429 - Echvi_0550 0.74 +0.3 622,429 - Echvi_0550 0.74 +0.4 622,429 - Echvi_0550 0.74 -1.9 622,450 + Echvi_0550 0.75 -1.4 622,450 + Echvi_0550 0.75 -0.2 622,451 - Echvi_0550 0.75 -1.6 622,451 - Echvi_0550 0.75 +0.2 622,451 - Echvi_0550 0.75 +0.7 622,523 - Echvi_0550 0.79 +0.9 622,537 + Echvi_0550 0.80 -0.3 622,559 + Echvi_0550 0.81 -0.8 622,559 + Echvi_0550 0.81 +1.9 622,560 - Echvi_0550 0.81 -0.2 622,560 - Echvi_0550 0.81 +0.5 622,579 + Echvi_0550 0.82 -0.2 622,580 - Echvi_0550 0.82 +0.5 622,580 - Echvi_0550 0.82 -0.5 622,580 - Echvi_0550 0.82 -1.4 622,604 + Echvi_0550 0.83 -1.8 622,605 - Echvi_0550 0.83 +1.2 622,622 - Echvi_0550 0.84 +0.9 622,647 - Echvi_0550 0.86 -0.9 622,748 + +0.4 622,749 - -0.4 622,866 - +0.2 622,882 + -1.0 623,006 + -0.3 623,006 + +1.4 623,071 - +0.3 623,073 + -0.3 623,073 + -1.0 623,073 + +0.1 623,074 - +0.3 623,107 + -0.7 623,188 + +0.7 623,188 + -0.1 623,189 - +0.1 623,189 - +0.5 623,208 + Echvi_0551 0.19 +0.8 623,209 - Echvi_0551 0.20 +1.2 623,214 + Echvi_0551 0.25 -1.6 623,225 - Echvi_0551 0.35 -1.6 623,225 - Echvi_0551 0.35 +0.3 623,225 - Echvi_0551 0.35 +0.4 623,225 - Echvi_0551 0.35 -1.8 623,225 - Echvi_0551 0.35 -0.3 623,228 + Echvi_0551 0.38 -0.5 623,228 + Echvi_0551 0.38 +1.0 623,229 - Echvi_0551 0.39 -0.5 623,290 - +1.0 623,309 + +0.4 623,382 - Echvi_0552 0.52 -0.7 623,432 + -0.1 623,479 + Echvi_0553 0.18 -0.3 623,541 - Echvi_0553 0.31 +0.5 623,568 - Echvi_0553 0.36 +1.0 623,603 - Echvi_0553 0.43 +1.5 623,611 + Echvi_0553 0.45 +0.5 623,612 - Echvi_0553 0.45 -1.7 623,612 - Echvi_0553 0.45 +0.6 623,684 - Echvi_0553 0.60 -0.8 623,706 - Echvi_0553 0.64 +1.3 623,706 - Echvi_0553 0.64 -2.9 623,713 + Echvi_0553 0.66 -0.3 623,713 + Echvi_0553 0.66 +1.0 623,714 - Echvi_0553 0.66 +0.8 623,780 + Echvi_0553 0.79 +1.1 623,780 + Echvi_0553 0.79 +1.9 623,781 - Echvi_0553 0.79 -1.4 623,781 - Echvi_0553 0.79 -0.2 623,781 - Echvi_0553 0.79 +0.3 623,781 - Echvi_0553 0.79 +0.3 623,782 + Echvi_0553 0.80 -0.7 623,782 + Echvi_0553 0.80 +0.9 623,783 - Echvi_0553 0.80 -1.8 623,783 - Echvi_0553 0.80 -0.1 623,847 + -1.8 623,847 + -0.7 623,847 + -1.1 623,848 - +0.1 623,848 - +0.9 623,848 - +0.4 623,848 - -0.9 623,849 + -0.4 623,850 - +0.6 623,850 - +0.8 623,859 - +0.3 623,928 + +0.0 623,929 - -1.0 623,929 - +0.0 623,929 - +1.8 623,939 + +0.1 623,960 + +0.5 623,960 + +0.9 623,960 + +0.1 623,961 - +0.2 623,961 - -0.4 623,967 + +1.2 624,010 - -0.3 624,019 + +0.2 624,019 + +0.4 624,019 + -0.4 624,019 + +0.7 624,028 + -1.8 624,075 - -0.5 624,079 + -0.5 624,080 - -0.4 624,080 - +0.3 624,140 - +2.3 624,143 + +0.0 624,144 - -1.8 624,160 - +0.0 624,164 - -0.4 624,212 - +0.4 624,212 - -0.7 624,212 - +0.4 624,224 - -1.1 624,224 - -0.2 624,224 - -0.2 624,224 - +0.2 624,224 - -0.1 624,227 + -0.1 624,227 + -0.2 624,227 + +0.2 624,277 - +0.2 624,287 - +0.4 624,287 - +1.2 624,287 - +0.1 624,296 - -1.0 624,316 + -2.0 624,316 + -0.7 624,316 + -1.1 624,317 - +0.2 624,318 + +0.4 624,318 + -0.2 624,318 + -2.3 624,323 + -0.7 624,323 + +1.2 624,323 + -0.6 624,344 - +0.3 624,369 - -1.2 624,427 + -0.1 624,516 + +0.8 624,526 + +0.2 624,550 - -1.8 624,581 + -0.4 624,608 - +1.2
Or see this region's nucleotide sequence